BDGP Sequence Production Resources |
Search the DGRC for LD46868
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 468 |
Well: | 68 |
Vector: | pOT2 |
Associated Gene/Transcript | tun-RA |
Protein status: | LD46868.pep: gold |
Preliminary Size: | 2100 |
Sequenced Size: | 2047 |
Gene | Date | Evidence |
---|---|---|
CG8253 | 2001-09-19 | Blastp of sequenced clone |
CG8253 | 2003-01-01 | Sim4 clustering to Release 3 |
tun | 2008-04-29 | Release 5.5 accounting |
tun | 2008-08-15 | Release 5.9 accounting |
tun | 2008-12-18 | 5.12 accounting |
2047 bp (2047 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060439
> LD46868.complete CGGGAACGCGTACACAACACAAGGAGCGGAGTGTGCCGAGCAAAAGAAAA AAAGAAAGAAAAAGAAGCGGAAAAGCCACCACCAGAGCGTGGAAGGGAAA AAAACGAAAAGCTGATAGAGGCGCCCACGAAAAACGCACGCAGCCTGCAA CATCCAAGGATTCCGGTGCCCAGACCAACGTAGTGTTCCGCCGTGATACA AGCTCCACGGGTCGCTGAGTGCGTGTTGCCCCAGGCTCAGTCACCTGGTC AGGCCGCCCCATCCTCGCCCGCTGCAGTGCAACAGAAAAATCTGCGGGGG ATGAGCGCGTTTGTTTTTGGTCAGGTGTGCGATCCCGTAACGAGTGAACA GGAGCTGCAAGGCAGCAGGCTGGGATAAAAGCTCCAGCATCCTTAGCTCC TTGGCTCCTTAGCATAATTTAATTCGCAAAAATCGAAACGAAACCAAACG AAACGAAAGCGAGAAATCGGCTCCTTTGCGAGAGAGAGCCCCCAGTGTAT GTGTATGTGTATGTGGCGGTGTGTGCGTGCCCGTGTGCCAGTGTGTGCGT GAGCAGCATCCTGGAAGCCAGAAAAAGACAGGAGAAATAACAAAAATATA AAAACATAGCAGAGGGGCCATCATCCGCATCGCAGCCTCCCTGGGAATGG AGGAATGTCGCTGAGCAGGTGCCAGTGCGACGAGCAGGATCGGAATAAGG ATTAGCCAGCGTCCAGCATCCTCCGATGCCACCGCATAGACATAGATACA GATTACAGATACGGATACACACACCCTGCTTTTGTCCAGGCAGCGGCGCA TAATGCAGTGATAATATAAACCAGCTCCTCTCGTGTCTCGTGCAATCTCC CAGTCCCCAGTGACAATTAGCTCCATCTCCGTCTCCATATCCATATCCTC CACGGCAAATCAACCCACAGGTCCTGGCTCAAGGATACCCGCACCCACAG CAACAGCCACAATAGCAACACAGGCGACCAGCATCGCAGCATCGCAGATC CCGGAGCGCATCAAGATGACCACGGACTTCCTCTTCCCTAAAATATCGGA CTGCTCCTACGTGTCCTGTTACTGCGAGGAGAACGTGTGGAAGCTCTGCG AGCAGGTGAAGCGGACGCGGCCGGAGGAGCTGTCCAAGTGCTACGCCGTC TTCGTTTCCAACGAGGGTCGCACCGTGCCCCTGTGGCGCCAGAAAGCAGG ACGCGGCGACGATCAAGTTGTGATATGGGACTACCACGTCTTCTTCATAC ACAATCCCTTGCTGAATCGCTGTTTGGTGTTCGATCTGGACACCACACTG CCCTTTCCCACATATTTTCACAAGTACGTGACGGAGACGTTCCGCTCCGA TCTGGCCCTGCGTCCGGAGCACCACAGATTCTTTAGAGTCATACCCGCAG ACACATATCTCATTGAGTTCTCGTCGGATCGGCGTCACATGCGTCGGCCG GATGGCAGTTGGATCAAGCCACCGCCCTCCTATCCACCTATACTCTCCAA TTCGAATATGCACTGTCTAGGAGACTTTATCTGCATGAGTGCAGGAAAAG GTCCAGGATCGGTCTACAGCCTGTCGGAGTTCGTGCAAAACTTCTACAAA TCGCCACATGTGATGGCGCAGAACAACAAGTAGATGGAGGGCCAGGGGAT CTAGAATGCCGAATCGTGCATCCGAAGCATCCAACAGCCCACAGATGCAG AACGCATCCAGCAACTCAACCACATCCAAATGCAAATACAAATCCGTATC GAAATCGTTTTGTCGTTGTCGTTACCAGACAGTTAATTACCAATTGCATA CATATACATACATACATATACACGCGAACATATAAATATATTTATGATAA TGTATTTTTGTATTCAGGTTAACAGAGATCAAGTGCAGAAGACGGTTAAA ACGCTGGCGCCACGCAGCTCTTGGCGTTCATATGCATTAAACTTCAATTC TAAAGAAATTATAAATCTAATTATACATTTTTTATTGTACGTATTGTATT GTATTTTATAAAGCAACCACCACACATAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 11735855..11736928 | 1..1074 | 5205 | 99 | Plus |
chr2R | 21145070 | chr2R | 11740314..11740838 | 1503..2027 | 2610 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 11739636..11739791 | 1074..1229 | 750 | 98.7 | Plus |
chr2R | 21145070 | chr2R | 11739919..11740068 | 1228..1377 | 750 | 100 | Plus |
chr2R | 21145070 | chr2R | 11740127..11740255 | 1374..1502 | 645 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 15848606..15849679 | 1..1074 | 5370 | 100 | Plus |
2R | 25286936 | 2R | 15853065..15853590 | 1503..2028 | 2630 | 100 | Plus |
2R | 25286936 | 2R | 15852387..15852542 | 1074..1229 | 780 | 100 | Plus |
2R | 25286936 | 2R | 15852670..15852819 | 1228..1377 | 750 | 100 | Plus |
2R | 25286936 | 2R | 15852878..15853006 | 1374..1502 | 645 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 15849805..15850878 | 1..1074 | 5370 | 100 | Plus |
2R | 25260384 | 2R | 15854264..15854789 | 1503..2028 | 2630 | 100 | Plus |
2R | 25260384 | 2R | 15853586..15853741 | 1074..1229 | 780 | 100 | Plus |
2R | 25260384 | 2R | 15853869..15854018 | 1228..1377 | 750 | 100 | Plus |
2R | 25260384 | 2R | 15854077..15854205 | 1374..1502 | 645 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 689..764 | 2010..1936 | 116 | 64.9 | Minus |
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 3880..3926 | 2000..1955 | 115 | 74.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 11736406..11736928 | 552..1074 | 98 | -> | Plus |
chr2R | 11739637..11739790 | 1075..1228 | 98 | -> | Plus |
chr2R | 11739920..11740068 | 1229..1377 | 100 | -> | Plus |
chr2R | 11740131..11740255 | 1378..1502 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tun-RA | 1..618 | 1016..1633 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tun-RA | 1..618 | 1016..1633 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tun-RD | 1..618 | 1016..1633 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tun-RA | 1..618 | 1016..1633 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tun-RD | 1..618 | 1016..1633 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tun-RA | 1..2025 | 1..2025 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tun-RA | 1..2025 | 1..2025 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tun-RD | 1048..3074 | 1..2027 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tun-RA | 1..2025 | 1..2025 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tun-RD | 1048..3074 | 1..2027 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15852671..15852819 | 1229..1377 | 100 | -> | Plus |
2R | 15852882..15853006 | 1378..1502 | 100 | -> | Plus |
2R | 15848606..15849679 | 1..1074 | 100 | -> | Plus |
2R | 15852388..15852541 | 1075..1228 | 100 | -> | Plus |
2R | 15853065..15853589 | 1503..2027 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15852671..15852819 | 1229..1377 | 100 | -> | Plus |
2R | 15852882..15853006 | 1378..1502 | 100 | -> | Plus |
2R | 15848606..15849679 | 1..1074 | 100 | -> | Plus |
2R | 15852388..15852541 | 1075..1228 | 100 | -> | Plus |
2R | 15853065..15853589 | 1503..2027 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15852671..15852819 | 1229..1377 | 100 | -> | Plus |
2R | 15852882..15853006 | 1378..1502 | 100 | -> | Plus |
2R | 15848606..15849679 | 1..1074 | 100 | -> | Plus |
2R | 15852388..15852541 | 1075..1228 | 100 | -> | Plus |
2R | 15853065..15853589 | 1503..2027 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 11740176..11740324 | 1229..1377 | 100 | -> | Plus |
arm_2R | 11740387..11740511 | 1378..1502 | 100 | -> | Plus |
arm_2R | 11740570..11741094 | 1503..2027 | 100 | Plus | |
arm_2R | 11736111..11737184 | 1..1074 | 100 | -> | Plus |
arm_2R | 11739893..11740046 | 1075..1228 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15849805..15850878 | 1..1074 | 100 | -> | Plus |
2R | 15853587..15853740 | 1075..1228 | 100 | -> | Plus |
2R | 15853870..15854018 | 1229..1377 | 100 | -> | Plus |
2R | 15854081..15854205 | 1378..1502 | 100 | -> | Plus |
2R | 15854264..15854788 | 1503..2027 | 100 | Plus |
Translation from 1015 to 1632
> LD46868.pep MTTDFLFPKISDCSYVSCYCEENVWKLCEQVKRTRPEELSKCYAVFVSNE GRTVPLWRQKAGRGDDQVVIWDYHVFFIHNPLLNRCLVFDLDTTLPFPTY FHKYVTETFRSDLALRPEHHRFFRVIPADTYLIEFSSDRRHMRRPDGSWI KPPPSYPPILSNSNMHCLGDFICMSAGKGPGSVYSLSEFVQNFYKSPHVM AQNNK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11500-PA | 205 | GF11500-PA | 1..205 | 1..205 | 1076 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20549-PA | 205 | GG20549-PA | 1..205 | 1..205 | 1105 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21323-PA | 205 | GH21323-PA | 1..205 | 1..205 | 1064 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
tun-PC | 205 | CG8253-PC | 1..205 | 1..205 | 1140 | 100 | Plus |
tun-PB | 205 | CG8253-PB | 1..205 | 1..205 | 1140 | 100 | Plus |
tun-PD | 205 | CG8253-PD | 1..205 | 1..205 | 1140 | 100 | Plus |
tun-PA | 205 | CG8253-PA | 1..205 | 1..205 | 1140 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19755-PA | 205 | GI19755-PA | 1..205 | 1..205 | 1063 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11768-PA | 532 | GL11768-PA | 1..205 | 1..205 | 1069 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20933-PA | 205 | GA20933-PA | 1..205 | 1..205 | 1051 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21641-PA | 205 | GM21641-PA | 1..205 | 1..205 | 1105 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11140-PA | 205 | GD11140-PA | 1..205 | 1..205 | 1105 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18123-PA | 205 | GJ18123-PA | 1..205 | 1..205 | 1071 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21898-PA | 205 | GK21898-PA | 1..205 | 1..205 | 1059 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11735-PA | 205 | GE11735-PA | 1..205 | 1..205 | 1105 | 99 | Plus |
Translation from 1015 to 1632
> LD46868.hyp MTTDFLFPKISDCSYVSCYCEENVWKLCEQVKRTRPEELSKCYAVFVSNE GRTVPLWRQKAGRGDDQVVIWDYHVFFIHNPLLNRCLVFDLDTTLPFPTY FHKYVTETFRSDLALRPEHHRFFRVIPADTYLIEFSSDRRHMRRPDGSWI KPPPSYPPILSNSNMHCLGDFICMSAGKGPGSVYSLSEFVQNFYKSPHVM AQNNK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
tun-PC | 205 | CG8253-PC | 1..205 | 1..205 | 1140 | 100 | Plus |
tun-PB | 205 | CG8253-PB | 1..205 | 1..205 | 1140 | 100 | Plus |
tun-PD | 205 | CG8253-PD | 1..205 | 1..205 | 1140 | 100 | Plus |
tun-PA | 205 | CG8253-PA | 1..205 | 1..205 | 1140 | 100 | Plus |