BDGP Sequence Production Resources |
Search the DGRC for LD46938
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 469 |
Well: | 38 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4813-RA |
Protein status: | LD46938.pep: gold |
Preliminary Size: | 2088 |
Sequenced Size: | 1518 |
Gene | Date | Evidence |
---|---|---|
CG4813 | 2001-01-01 | Release 2 assignment |
CG4813 | 2001-07-04 | Blastp of sequenced clone |
CG4813 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4813 | 2008-04-29 | Release 5.5 accounting |
CG4813 | 2008-08-15 | Release 5.9 accounting |
CG4813 | 2008-12-18 | 5.12 accounting |
1518 bp (1518 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052004
> LD46938.complete AAGAAATCGGCGTCGCGTGGCTTGGACAGAGATTATCGAACAAAACAAAA TCCGACTACAGAATCTTTTAACTTCGTTTACCCTTAAGAGTCCGCGGTGG ATCCGAGGAATCGATGGCTACGGACACGGTGTCCAACGGCGAGAACTTCG CCCAGCACTTGAGCAGAAACAGCGACGACGACGTGATCTGTCCCACATGC GACGTGAAGATCAAGCGCAGTCAGGTGGCCGATCACTGCCAAGTGGAGAT GGAGCGATTGCACAATCCCATTAGCGCTGTCACTCCACCGACCCCAACTA GCGGAGCAACCGCGTCCGAGGAATCCGGTTCGGTATCGGGGGGCAGACAA CCGTGGAGCGTGTTCCAGCGGGTGCAGCGCAATCGGCAGGCCCGTCAGCG CCAGCGCACCAGGAAGCGTCCGGCTTCTCCTGCCCCACCAGCAACTGTAA ATCCTACGGTAGCAGCTGCTCCTCCTCCAGCTGCAGCAACTCCGTCCGTA GCTGCTGCCGAATCGAGCCAACCCACCTGTCCCGTGTGCAACCACAACTT TCCGCAGTCCAACATCCAAGAGCATGTTAATCATTGCCTGCGCCAGAGCC GCCGCAATGGTCAGGCCAATGGTGAGCGGCATTCGAGTGAGGACTCGGAG GACAGCGAGGAATATGAAGAGTACGAGTGGGCGGGACAGAAGCGCATTCG CGTCTCCACTCTCGTGCAAGGAGGCTATTCCGCCCTGGGCCTGGGCCAGA GAATCAAATACAATGGCAGTCAGCAGGCGCAGGACGACGAGGACGAAGAT CTCAACGTGGACGAGGATGACACTCACATCTATGGTCCTACGCAGTATGG CGAGGGCGATGTGATCCCACTGGTCAACGAGGACACAGAGGGAAATGTTT CCGAGGCGGATGTTACCAGCTACGTGCGCCGACTTATCTCCTCCAGCGAT GGGCCCAAGCCAAACCATTCCAGCGAAGCCACCGAGCAAGAGCCTGCCAG CACAAGCAACGTGGAGGCTCCACCAGCCAGCGAGGAGCCGTCTACGTCGC GGTCCACGCGATCCACCTCCCAAAACCAGCAGCAGATCATCGAATCGCTG AAGGCCAAGCTGCGGCTCTACGAAAAGCAGGCGCAGGGCAAGTACAAGTG CCTGATCTGCATCGACGACTACAAGAATCCCGCCATCTCCGTGTCCTGCT GGCACGTCCACTGCGAGCAGTGTTGGTTGCAGACGCTCGGCGCGCGAAAG CTGTGCCCGCAGTGCAACTCGATTACCACGCCGAAGGACCTGCGACGAAT CTACCTGTAGACGTCCATCACAGACTTGTTATCCCCGCTGCCAAATTGCT TGCGCCATAAAACAGGCTTTGCATCCCGACGCAGCTTTAGATGATAATCC CCTATACATATTATTTATATAGATTACAAATACCAATTATACTACGTGAC ATTACAATAAGCCTACCATGTAACTATTGCAATAAACCGCAGAAAACATA AAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 18548365..18549863 | 1499..1 | 7465 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 22724882..22726382 | 1501..1 | 7505 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 22465713..22467213 | 1501..1 | 7505 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 18548365..18549863 | 1..1499 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4813-RA | 1..1197 | 114..1310 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4813-RA | 1..1197 | 114..1310 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4813-RA | 1..1197 | 114..1310 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4813-RA | 1..1197 | 114..1310 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4813-RA | 1..1197 | 114..1310 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4813-RA | 519..2017 | 1..1499 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4813-RA | 1..1499 | 1..1499 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4813-RA | 1..1499 | 1..1499 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4813-RA | 519..2017 | 1..1499 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4813-RA | 33..1531 | 1..1499 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22724884..22726382 | 1..1499 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22724884..22726382 | 1..1499 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22724884..22726382 | 1..1499 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 18550606..18552104 | 1..1499 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22465715..22467213 | 1..1499 | 100 | Minus |
Translation from 113 to 1309
> LD46938.pep MATDTVSNGENFAQHLSRNSDDDVICPTCDVKIKRSQVADHCQVEMERLH NPISAVTPPTPTSGATASEESGSVSGGRQPWSVFQRVQRNRQARQRQRTR KRPASPAPPATVNPTVAAAPPPAAATPSVAAAESSQPTCPVCNHNFPQSN IQEHVNHCLRQSRRNGQANGERHSSEDSEDSEEYEEYEWAGQKRIRVSTL VQGGYSALGLGQRIKYNGSQQAQDDEDEDLNVDEDDTHIYGPTQYGEGDV IPLVNEDTEGNVSEADVTSYVRRLISSSDGPKPNHSSEATEQEPASTSNV EAPPASEEPSTSRSTRSTSQNQQQIIESLKAKLRLYEKQAQGKYKCLICI DDYKNPAISVSCWHVHCEQCWLQTLGARKLCPQCNSITTPKDLRRIYL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18292-PA | 394 | GF18292-PA | 1..394 | 1..398 | 1349 | 79.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12490-PA | 402 | GG12490-PA | 1..402 | 1..398 | 1587 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18504-PA | 402 | GH18504-PA | 1..402 | 1..398 | 993 | 66.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4813-PA | 398 | CG4813-PA | 1..398 | 1..398 | 2111 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24349-PA | 402 | GI24349-PA | 1..402 | 1..398 | 993 | 64.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23780-PA | 383 | GL23780-PA | 1..383 | 1..398 | 1219 | 69.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18450-PA | 383 | GA18450-PA | 1..383 | 1..398 | 1218 | 69.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23622-PA | 396 | GM23622-PA | 1..396 | 1..398 | 2038 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18432-PA | 397 | GD18432-PA | 1..397 | 1..398 | 2051 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24360-PA | 404 | GJ24360-PA | 1..404 | 1..398 | 988 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11468-PA | 396 | GK11468-PA | 1..396 | 1..398 | 1202 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24010-PA | 400 | GE24010-PA | 1..400 | 1..398 | 1515 | 91.5 | Plus |
Translation from 113 to 1309
> LD46938.hyp MATDTVSNGENFAQHLSRNSDDDVICPTCDVKIKRSQVADHCQVEMERLH NPISAVTPPTPTSGATASEESGSVSGGRQPWSVFQRVQRNRQARQRQRTR KRPASPAPPATVNPTVAAAPPPAAATPSVAAAESSQPTCPVCNHNFPQSN IQEHVNHCLRQSRRNGQANGERHSSEDSEDSEEYEEYEWAGQKRIRVSTL VQGGYSALGLGQRIKYNGSQQAQDDEDEDLNVDEDDTHIYGPTQYGEGDV IPLVNEDTEGNVSEADVTSYVRRLISSSDGPKPNHSSEATEQEPASTSNV EAPPASEEPSTSRSTRSTSQNQQQIIESLKAKLRLYEKQAQGKYKCLICI DDYKNPAISVSCWHVHCEQCWLQTLGARKLCPQCNSITTPKDLRRIYL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4813-PA | 398 | CG4813-PA | 1..398 | 1..398 | 2111 | 100 | Plus |