BDGP Sequence Production Resources |
Search the DGRC for LD46952
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 469 |
Well: | 52 |
Vector: | pOT2 |
Associated Gene/Transcript | GlyS-RB |
Protein status: | LD46952.pep: gold |
Preliminary Size: | 2955 |
Sequenced Size: | 3149 |
Gene | Date | Evidence |
---|---|---|
CG6904 | 2001-01-01 | Release 2 assignment |
CG6904 | 2001-07-04 | Blastp of sequenced clone |
CG6904 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6904 | 2008-04-29 | Release 5.5 accounting |
CG6904 | 2008-08-15 | Release 5.9 accounting |
CG6904 | 2008-12-18 | 5.12 accounting |
3149 bp (3149 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052005
> LD46952.complete CACACACCGATTGATGCACTTTCAAGCAAACATTCGTTATCAGCGGCTTG CAGTTTTTGTTGCATTTCGTAATTGGCGCCAAGCGAATGCTTTGGAAACA TACGTTATCAGACTTTATAGCACTACCTGATGGAAAAGTGATAAACGCGA AACATAAACAAATAGGCGGTGATAAGCGTTATTAGCATTATCAATGCGCC GGCCGCATGAAAAAGAAAATACAAATTCCTGGCGTCCTCTCTCTCCCTCT CTTTCGCCCACCACAGAGTGCAACAAAAACAAAATTATCAAGTTTTTAAA CTTGTTGAGCGGGTTGAATACGGCAACAACAATTGGTACAACAAAAAAAC ACGAACAAACAATAACAAAATGGGGCGCAAGAATAATACCAATAATGGTG AACAATTTTTAGTGCTCTCGCTCTCGCTCAGCAGCACGCCGCCACTGACC TTTATTTGACTTTTAGCTGGCAATGAAAAAATATCTCTGCCTGCCACAAA CACACAAACACAGACGTACACTTGAGGTCTTGCCGCTGTGTTGTTGTTGC TGCTGTTGTTCTTGTTGTTTTTAATTTCGGAGTTGCATTGCAGAAGCGCG TATGTGCGGGTGCGAGTGAGATAGCACTTCATTTTCACCTCCTCCTTCGC AATCACATAAATAAATTATCAAGTGCAAGAAGTCGACAATTGTTCAACTA TGAATCGTCGCTTTTCGAGAGTGGAGTCCGGGGCGGACCTTAAGGATTAT TTCGATCGGGGTGATATCGCTTCCCGGGAGAACCGCTGGAACTTCGAGGT GGCATGGGAGGTGGCCAACAAGGTGGGCGGTATTTACACGGTGATCCGGT CGAAGGCATATGTCTCCACCGAGGAGATGGGCGAGCAGTTGTGTATGATG GGTCCCTACAAGGAGCACTGTGCCCGCACCGAGATGGAGGAGATGGAGTT CCCCAGGGGAAACCCCCTACTAGACGCTGTCAACTCATTGCGCTCGCGAG GCTATAAAATCCACACCGGTCGCTGGCTGGTGGACGGAAATCCTCAATTA ATCCTGTTCGATATTGGATCAGCCGCTTGGAAGCTGGATCAGTTCAAATC GGAGATGTGGGAGAAGTGCCATATTGGAATACCTCATTTGGATATCGAGA CGAACGATGCCATTATCCTTGGCTTTATGATTGCCGAGTTCCTGGAGGAG TTCCGCAACTTTGCCGTGACTTATTCGCAGAACAACGAATTGAGCGCTCC GAGGATTGTCGCCCACTTCCACGAATGGCAAGCTGGCGTGGGTCTCATTG TCCTACGTACTCGTCTGGTGGAGATCGCCACTGTGTTCACTACCCACGCC ACATTGTTGGGTCGTTACTTGTGCGCCGGCAACACCGATTTCTACAACAA TCTGGACAAGTTCGCCGTGGACGAAGAGGCGGGCAAGCGCCAAATCTATC ATCGTTATTGCCTGGAGCGAGGTGCCACCCACTTGGCTCATGTGTTCACC ACCGTCTCCGAGATTACGGGCTACGAGGCAGAGCATCTGCTCAAGCGCAA ACCGGACATCATCACGCCCAATGGACTGAACGTGAAGAAGTTCTCGGCCA TCCACGAGTTCCAGAACTTGCACGCCGTTGCCAAGGAGAAGATCAACGAA TTCGTGCGGGGTCACTTTTACGGCCACATTGACTTTGATTTAGATAAGAC CCTGTACTTCTTCATCGCCGGTCGCTACGAGTTTGGAAACAAGGGAGCCG ACATCTTCATCGAGGCACTGGCTCGCTTGAACGCGATGCTCAAGCACGAG AAGCCGGACACCACGGTGGTGGCCTTTCTCATCTTCCCCACCAAGACCAA CAACTTCAACGTGGACTCGCTGCGAGGACATGCCGTGATCAAGCAGTTGC GCGATACGATCAACAACGTCCAGCAGGCCGTGGGCAAGCGGATGTTCGAC ACTTGTCTGCAGGGCAACATACCCAATGCCGATGATCTGCTTCAGAAGGA TGACCTCGTCAAGATCAAGCGTTGCATGTTCGCCATGCAGCGCGATTCGA TGCCGCCTGTTACCACGCACAATGTGGCTGATGACTGGAATGATCCGGTG CTATCCTCAATCCGTCGTTGCCATCTGTTCAACTCGCGCCACGATCGTGT CAAGATGGTCTTCCATCCGGAGTTCCTCACATCCACAAATCCTCTGTTTG GAATCGACTACGAAGAATTTGTCCGTGGCTGCCACTTGGGTGTCTTCCCC TCATACTACGAGCCCTGGGGTTACACTCCCGCCGAGTGTACGGTGATGGG TATCCCCAGCGTAACCACCAATCTGTCCGGCTTTGGCTGCTTCATGGAGG AGCACATCAGTGATCCCAAGTCATACGGTATCTACATCGTGGATCGCCGC TATATCGGCTTGGAGAACAGCGTTCAGCAGCTGTCCAGCTTTATGATGGA GTTCTCCAGGCTGAACCGCCGCCAGCGCATTATCCAGCGTAATCGCACGG AGCGGTTGAGCGATCTTCTGGACTGGCGCACCCTGGGCATTTACTACAGA CAGGCCAGGGTTAAGGCCCTGCAAGCTGTTTACCCAGACTATGTGGATGA ATTGTCTCTCTATGGATCGAAGAACAACTTGATCTTCTCGCGACCGCACA GCGAACCTCCCAGTCCTACTTCATCGCGGCACACCACTCCAGCTCCATCG GTTCACGGTTCGGATGACGAGGACTCCGTGGATGAGGAGACCGAACTCAA GGAATTGGGGATTAAGTAGAGTTCTCTGCCAAATGGAAGGCCCTTATATT TGTAGCGAACAAACCAATTAAAATCAACACACGCGCAATATTACCATAAG TTCCAGTTGTCTTGTTCCACCAATGTTCATCGAGATACGGGCTAAACTCT TGCCCGGATGCCTTCGAAACTATCTACCTGCAATTGAAATGCCAGAACAA ATGTTTTCACATCTAATCAAATTATTAATATTATGTATGCCCAGATCGCA AGCGTAAGCATTCGAGCAGGACGAGTCCAGATTTTATTAAACGTTGTTTA GTCCATAAGGAGAACGAGGTCTCCCCGCCCTGTCACCCAGCTTCATACCC TGCGTATCAAATAAATCGTTATTTAAAGTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6904-RB | 3193 | CG6904-RB | 30..3159 | 1..3130 | 15650 | 100 | Plus |
CG6904.a | 2829 | CG6904.a | 365..2795 | 700..3130 | 12155 | 100 | Plus |
CG6904-RA | 2842 | CG6904-RA | 256..2686 | 700..3130 | 12155 | 100 | Plus |
CG6904.a | 2829 | CG6904.a | 30..364 | 1..335 | 1675 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 10968911..10969884 | 1673..700 | 4855 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 10967604..10968476 | 2541..1669 | 4350 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 10971346..10972044 | 699..1 | 3465 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 10966488..10966939 | 3129..2678 | 2260 | 100 | Minus |
chr3R | 27901430 | chr3R | 10967373..10967509 | 2678..2542 | 685 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 15144266..15145239 | 1673..700 | 4870 | 100 | Minus |
3R | 32079331 | 3R | 15142959..15143831 | 2541..1669 | 4350 | 99.9 | Minus |
3R | 32079331 | 3R | 15146701..15147399 | 699..1 | 3495 | 100 | Minus |
3R | 32079331 | 3R | 15141842..15142294 | 3130..2678 | 2265 | 100 | Minus |
3R | 32079331 | 3R | 15142728..15142864 | 2678..2542 | 685 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 14885097..14886070 | 1673..700 | 4870 | 100 | Minus |
3R | 31820162 | 3R | 14883790..14884662 | 2541..1669 | 4350 | 99.8 | Minus |
3R | 31820162 | 3R | 14887532..14888230 | 699..1 | 3495 | 100 | Minus |
3R | 31820162 | 3R | 14882673..14883125 | 3130..2678 | 2265 | 100 | Minus |
3R | 31820162 | 3R | 14883559..14883695 | 2678..2542 | 685 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 1871..2026 | 250..407 | 119 | 55.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 10966488..10966939 | 2678..3129 | 100 | <- | Minus |
chr3R | 10967374..10967509 | 2542..2677 | 100 | <- | Minus |
chr3R | 10967604..10968471 | 1674..2541 | 100 | <- | Minus |
chr3R | 10968911..10969884 | 700..1673 | 99 | <- | Minus |
chr3R | 10971346..10972044 | 1..699 | 95 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6904-RA | 61..2130 | 700..2769 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6904-RA | 61..2130 | 700..2769 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GlyS-RB | 1..2070 | 700..2769 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6904-RA | 61..2130 | 700..2769 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GlyS-RB | 1..2070 | 700..2769 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6904-RB | 1..3129 | 1..3129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6904-RB | 1..3129 | 1..3129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GlyS-RB | 1..3129 | 1..3129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6904-RB | 1..3129 | 1..3129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GlyS-RB | 1..3129 | 1..3129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15141843..15142294 | 2678..3129 | 100 | <- | Minus |
3R | 15142729..15142864 | 2542..2677 | 100 | <- | Minus |
3R | 15142959..15143826 | 1674..2541 | 100 | <- | Minus |
3R | 15144266..15145239 | 700..1673 | 100 | <- | Minus |
3R | 15146701..15147399 | 1..699 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15141843..15142294 | 2678..3129 | 100 | <- | Minus |
3R | 15142729..15142864 | 2542..2677 | 100 | <- | Minus |
3R | 15142959..15143826 | 1674..2541 | 100 | <- | Minus |
3R | 15144266..15145239 | 700..1673 | 100 | <- | Minus |
3R | 15146701..15147399 | 1..699 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15141843..15142294 | 2678..3129 | 100 | <- | Minus |
3R | 15142729..15142864 | 2542..2677 | 100 | <- | Minus |
3R | 15142959..15143826 | 1674..2541 | 100 | <- | Minus |
3R | 15144266..15145239 | 700..1673 | 100 | <- | Minus |
3R | 15146701..15147399 | 1..699 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 10967565..10968016 | 2678..3129 | 100 | <- | Minus |
arm_3R | 10968451..10968586 | 2542..2677 | 100 | <- | Minus |
arm_3R | 10968681..10969548 | 1674..2541 | 100 | <- | Minus |
arm_3R | 10969988..10970961 | 700..1673 | 100 | <- | Minus |
arm_3R | 10972423..10973121 | 1..699 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14882674..14883125 | 2678..3129 | 100 | <- | Minus |
3R | 14883560..14883695 | 2542..2677 | 100 | <- | Minus |
3R | 14883790..14884657 | 1674..2541 | 100 | <- | Minus |
3R | 14885097..14886070 | 700..1673 | 100 | <- | Minus |
3R | 14887532..14888230 | 1..699 | 100 | Minus |
Translation from 699 to 2768
> LD46952.pep MNRRFSRVESGADLKDYFDRGDIASRENRWNFEVAWEVANKVGGIYTVIR SKAYVSTEEMGEQLCMMGPYKEHCARTEMEEMEFPRGNPLLDAVNSLRSR GYKIHTGRWLVDGNPQLILFDIGSAAWKLDQFKSEMWEKCHIGIPHLDIE TNDAIILGFMIAEFLEEFRNFAVTYSQNNELSAPRIVAHFHEWQAGVGLI VLRTRLVEIATVFTTHATLLGRYLCAGNTDFYNNLDKFAVDEEAGKRQIY HRYCLERGATHLAHVFTTVSEITGYEAEHLLKRKPDIITPNGLNVKKFSA IHEFQNLHAVAKEKINEFVRGHFYGHIDFDLDKTLYFFIAGRYEFGNKGA DIFIEALARLNAMLKHEKPDTTVVAFLIFPTKTNNFNVDSLRGHAVIKQL RDTINNVQQAVGKRMFDTCLQGNIPNADDLLQKDDLVKIKRCMFAMQRDS MPPVTTHNVADDWNDPVLSSIRRCHLFNSRHDRVKMVFHPEFLTSTNPLF GIDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFME EHISDPKSYGIYIVDRRYIGLENSVQQLSSFMMEFSRLNRRQRIIQRNRT ERLSDLLDWRTLGIYYRQARVKALQAVYPDYVDELSLYGSKNNLIFSRPH SEPPSPTSSRHTTPAPSVHGSDDEDSVDEETELKELGIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17161-PA | 709 | GF17161-PA | 21..709 | 1..689 | 3662 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20891-PA | 709 | GG20891-PA | 21..709 | 1..689 | 3746 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14560-PA | 711 | GH14560-PA | 22..711 | 1..689 | 3441 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GlyS-PD | 689 | CG6904-PD | 1..689 | 1..689 | 3667 | 100 | Plus |
GlyS-PA | 709 | CG6904-PA | 21..709 | 1..689 | 3667 | 100 | Plus |
GlyS-PB | 689 | CG6904-PB | 1..689 | 1..689 | 3667 | 100 | Plus |
GlyS-PC | 689 | CG6904-PC | 1..689 | 1..689 | 3667 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23664-PA | 709 | GI23664-PA | 21..709 | 1..689 | 3638 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21689-PA | 771 | GL21689-PA | 83..771 | 1..689 | 3527 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19945-PB | 689 | GA19945-PB | 1..689 | 1..689 | 3514 | 94.3 | Plus |
Dpse\GA19945-PA | 709 | GA19945-PA | 21..709 | 1..689 | 3513 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25805-PA | 709 | GM25805-PA | 21..709 | 1..689 | 3742 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20381-PA | 709 | GD20381-PA | 21..709 | 1..689 | 3746 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23225-PA | 710 | GJ23225-PA | 22..710 | 1..689 | 3539 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13980-PA | 709 | GK13980-PA | 21..709 | 1..689 | 3677 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26410-PA | 709 | GE26410-PA | 21..709 | 1..689 | 3746 | 100 | Plus |
Translation from 699 to 2768
> LD46952.hyp MNRRFSRVESGADLKDYFDRGDIASRENRWNFEVAWEVANKVGGIYTVIR SKAYVSTEEMGEQLCMMGPYKEHCARTEMEEMEFPRGNPLLDAVNSLRSR GYKIHTGRWLVDGNPQLILFDIGSAAWKLDQFKSEMWEKCHIGIPHLDIE TNDAIILGFMIAEFLEEFRNFAVTYSQNNELSAPRIVAHFHEWQAGVGLI VLRTRLVEIATVFTTHATLLGRYLCAGNTDFYNNLDKFAVDEEAGKRQIY HRYCLERGATHLAHVFTTVSEITGYEAEHLLKRKPDIITPNGLNVKKFSA IHEFQNLHAVAKEKINEFVRGHFYGHIDFDLDKTLYFFIAGRYEFGNKGA DIFIEALARLNAMLKHEKPDTTVVAFLIFPTKTNNFNVDSLRGHAVIKQL RDTINNVQQAVGKRMFDTCLQGNIPNADDLLQKDDLVKIKRCMFAMQRDS MPPVTTHNVADDWNDPVLSSIRRCHLFNSRHDRVKMVFHPEFLTSTNPLF GIDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFME EHISDPKSYGIYIVDRRYIGLENSVQQLSSFMMEFSRLNRRQRIIQRNRT ERLSDLLDWRTLGIYYRQARVKALQAVYPDYVDELSLYGSKNNLIFSRPH SEPPSPTSSRHTTPAPSVHGSDDEDSVDEETELKELGIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GlyS-PD | 689 | CG6904-PD | 1..689 | 1..689 | 3667 | 100 | Plus |
GlyS-PA | 709 | CG6904-PA | 21..709 | 1..689 | 3667 | 100 | Plus |
GlyS-PB | 689 | CG6904-PB | 1..689 | 1..689 | 3667 | 100 | Plus |
GlyS-PC | 689 | CG6904-PC | 1..689 | 1..689 | 3667 | 100 | Plus |