BDGP Sequence Production Resources |
Search the DGRC for LD47007
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 470 |
Well: | 7 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11982-RA |
Protein status: | LD47007.pep: gold |
Preliminary Size: | 1698 |
Sequenced Size: | 1571 |
Gene | Date | Evidence |
---|---|---|
CG11982 | 2001-01-01 | Release 2 assignment |
CG11982 | 2001-07-04 | Blastp of sequenced clone |
CG11982 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11982 | 2008-04-29 | Release 5.5 accounting |
CG11982 | 2008-08-15 | Release 5.9 accounting |
CG11982 | 2008-12-18 | 5.12 accounting |
1571 bp (1571 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052007
> LD47007.complete CGGCAAAGGCCACTTTGTAAGGGGCCCTTATTTATAGAAAAATTAAATTC TATCCCTTAAACTCCCAATTGTTCCGACTGAACCCAATGACCGGGTAAAG CTAGGCGCGTGTACCTTGTCCTCCTCTTGTCACATCAACGTCTACAGCCG CAAGCAGCCTACATCATCGGAAGGCGACAGTCTTGCACAATCGTCAGTGG AGCCGTTGCCCAGGAAATAAAGAACCTACCGCAGGATGGCAGAGGCAATG GTTGTGGAGGACCGCCCCGCGGAAGCCAAGCGATTCTTCTGCCACATGTG CAACGTGGAGATCAACATTCCCAACTCAGACTTCACCTGTCCGCTGTGCG CCAACGGTTTCGTGGAGGAGCTGCCGGCAAATGCGCCGGAGATGGATTCT TCGACGGCTGGAGCATCCGGCAGTGCCAGATCCGGAAGCAGCGGTAGTGG CTCTTCTGGCTCACACGACACCCTGAGCAGAGGCAGCTCATCGAGCGGAT CTCAGGTGAATGTTGAGTCGCTGCGTAACGATATTGTGTCGCTGCTAAAC ATGCGGAATGTGCCCAACTTGGAAATTACCATCGAGCCAAACAGACGGCA CAGCAACGTGCTGCATCTAGGCGGCTTTGGTGGTCCCTCGGGTAGTGACT CTGCCCGCGGCCTGACCGCCGGCGGACGAGTGCGTCCGGCAAATTTGGAC CGACTGGACAATGTTCTCTTTGATTTTCTGCAGAGCCTGCCACTGGCCGG CGCCACGGCCGAAATAGTAACTGGACCCGGTGGAGGAGGTGTAGGCGGCG GCGGTAACTCGCACATGTTCTTCATGGGAAACCCGGGAGATTATGCGTGG GGCCGAGAGGGACTAGACACCATTGTCACCCAAATGCTCAACCAAATGGA AACTTCAGGACCGCCGCCATTGTCGGCGCAGCGCATAAACGAGATACCCA ATGTGCAGATCAATGCCGAGGAGGTAAACCGCAAGATCCAGTGCTCTATA TGCTGGGACGACTTCAAGATTGACGAGACGGTACGCAAGCTGCCCTGCTC GCACCTGTATCACGAGAACTGCATCGTGCCTTGGCTAAACCTGCACAGCA CCTGCCCCATATGCCGCAAGTCACTGGCAGACGATGGCAACGATGCGGAC GACGAATTTGTCATGCTCGATGCCTTCGGACCAGAGATGGCGGCCGATGG CAGTAATTCCGAAAGGAGATCGGCCAGCACCGCCACAGGAACGGACAATC CCTCGCCGGCTAATAATCCCAGTCAGGCAGCGGCGGAAGGCGGCCGAACA CGTCCGGATGCTAATCCCGCCCAGGCAGCACGCAACAACATCTTTACCTT TGACGACGACAACATGTTTCTGGACTAGCTGGTAGGGCGATGCTAAATCG AAGTGGAGCGATGATCGATTGATATTCAAAATTAAGCCAAATATTGGCCG CATATATATTTATAATAGTTTCTCCTCACGCTTAATTTTGTTGTTGTTCA AAATAACGATTTGTAATAAACAAAACGGGACATACGATTCCGTTGGCTCT GCAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11982-RA | 1579 | CG11982-RA | 28..1579 | 1..1552 | 7760 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 4832373..4833924 | 1..1552 | 7700 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 9006479..9008035 | 1..1557 | 7785 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 8747310..8748866 | 1..1557 | 7785 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Transpac | 5249 | Transpac 5249bp Derived from AF222049 (AF222049.1) (Rel. 62, Last updated, Version 1). | 1369..1472 | 1506..1395 | 119 | 61.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4832373..4833924 | 1..1552 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11982-RA | 1..1143 | 236..1378 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11982-RA | 1..1143 | 236..1378 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11982-RA | 1..1143 | 236..1378 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11982-RA | 1..1143 | 236..1378 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11982-RA | 1..1143 | 236..1378 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11982-RA | 28..1579 | 1..1552 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11982-RA | 28..1579 | 1..1552 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11982-RA | 24..1575 | 1..1552 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11982-RA | 28..1579 | 1..1552 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11982-RA | 24..1575 | 1..1552 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9006479..9008030 | 1..1552 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9006479..9008030 | 1..1552 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9006479..9008030 | 1..1552 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4832201..4833752 | 1..1552 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8747310..8748861 | 1..1552 | 100 | Plus |
Translation from 235 to 1377
> LD47007.hyp MAEAMVVEDRPAEAKRFFCHMCNVEINIPNSDFTCPLCANGFVEELPANA PEMDSSTAGASGSARSGSSGSGSSGSHDTLSRGSSSSGSQVNVESLRNDI VSLLNMRNVPNLEITIEPNRRHSNVLHLGGFGGPSGSDSARGLTAGGRVR PANLDRLDNVLFDFLQSLPLAGATAEIVTGPGGGGVGGGGNSHMFFMGNP GDYAWGREGLDTIVTQMLNQMETSGPPPLSAQRINEIPNVQINAEEVNRK IQCSICWDDFKIDETVRKLPCSHLYHENCIVPWLNLHSTCPICRKSLADD GNDADDEFVMLDAFGPEMAADGSNSERRSASTATGTDNPSPANNPSQAAA EGGRTRPDANPAQAARNNIFTFDDDNMFLD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11982-PA | 380 | CG11982-PA | 1..380 | 1..380 | 2015 | 100 | Plus |
mura-PB | 868 | CG9381-PB | 744..867 | 226..350 | 174 | 31 | Plus |
mura-PA | 868 | CG9381-PA | 744..867 | 226..350 | 174 | 31 | Plus |
mura-PC | 1173 | CG9381-PC | 1049..1172 | 226..350 | 174 | 31 | Plus |
Translation from 235 to 1377
> LD47007.pep MAEAMVVEDRPAEAKRFFCHMCNVEINIPNSDFTCPLCANGFVEELPANA PEMDSSTAGASGSARSGSSGSGSSGSHDTLSRGSSSSGSQVNVESLRNDI VSLLNMRNVPNLEITIEPNRRHSNVLHLGGFGGPSGSDSARGLTAGGRVR PANLDRLDNVLFDFLQSLPLAGATAEIVTGPGGGGVGGGGNSHMFFMGNP GDYAWGREGLDTIVTQMLNQMETSGPPPLSAQRINEIPNVQINAEEVNRK IQCSICWDDFKIDETVRKLPCSHLYHENCIVPWLNLHSTCPICRKSLADD GNDADDEFVMLDAFGPEMAADGSNSERRSASTATGTDNPSPANNPSQAAA EGGRTRPDANPAQAARNNIFTFDDDNMFLD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16575-PA | 376 | GF16575-PA | 1..376 | 1..380 | 1414 | 79.7 | Plus |
Dana\GF18360-PA | 547 | GF18360-PA | 212..286 | 229..301 | 155 | 38.7 | Plus |
Dana\GF11510-PA | 628 | GF11510-PA | 303..344 | 253..294 | 153 | 52.4 | Plus |
Dana\GF16054-PA | 854 | GF16054-PA | 730..801 | 229..299 | 152 | 36.1 | Plus |
Dana\GF16908-PA | 147 | GF16908-PA | 30..117 | 214..300 | 146 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14428-PA | 381 | GG14428-PA | 1..381 | 1..380 | 1646 | 94 | Plus |
Dere\GG19861-PA | 616 | GG19861-PA | 303..344 | 253..294 | 154 | 52.4 | Plus |
Dere\GG17363-PA | 887 | GG17363-PA | 766..837 | 229..299 | 154 | 37.5 | Plus |
Dere\GG13423-PA | 538 | GG13423-PA | 211..285 | 229..301 | 151 | 37.3 | Plus |
Dere\GG22947-PA | 147 | GG22947-PA | 44..117 | 227..300 | 143 | 36.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19379-PA | 412 | GH19379-PA | 1..412 | 1..380 | 1143 | 61.8 | Plus |
Dgri\GH19305-PA | 885 | GH19305-PA | 762..876 | 229..353 | 178 | 34.9 | Plus |
Dgri\GH18348-PA | 147 | GH18348-PA | 30..117 | 214..300 | 156 | 35.2 | Plus |
Dgri\GH19534-PA | 534 | GH19534-PA | 199..273 | 229..301 | 153 | 38.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11982-PA | 380 | CG11982-PA | 1..380 | 1..380 | 2015 | 100 | Plus |
mura-PB | 868 | CG9381-PB | 744..867 | 226..350 | 174 | 31 | Plus |
mura-PA | 868 | CG9381-PA | 744..867 | 226..350 | 174 | 31 | Plus |
mura-PC | 1173 | CG9381-PC | 1049..1172 | 226..350 | 174 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22582-PA | 383 | GI22582-PA | 1..383 | 1..380 | 1169 | 64.5 | Plus |
Dmoj\GI23331-PA | 147 | GI23331-PA | 30..117 | 214..300 | 147 | 33 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12113-PA | 362 | GL12113-PA | 1..362 | 1..380 | 1256 | 67.7 | Plus |
Dper\GL16830-PA | 737 | GL16830-PA | 303..344 | 253..294 | 155 | 52.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11309-PA | 362 | GA11309-PA | 1..362 | 1..380 | 1256 | 67.7 | Plus |
Dpse\GA15425-PB | 617 | GA15425-PB | 303..344 | 253..294 | 154 | 52.4 | Plus |
Dpse\GA20524-PA | 147 | GA20524-PA | 44..117 | 227..300 | 145 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23778-PA | 379 | GM23778-PA | 1..379 | 1..380 | 1948 | 97.1 | Plus |
Dsec\GM26248-PA | 872 | GM26248-PA | 751..822 | 229..299 | 154 | 37.5 | Plus |
Dsec\GM11764-PA | 611 | GM11764-PA | 303..344 | 253..294 | 153 | 52.4 | Plus |
Dsec\GM17873-PA | 163 | GM17873-PA | 44..117 | 227..300 | 143 | 36.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18588-PA | 379 | GD18588-PA | 1..379 | 1..380 | 1947 | 97.1 | Plus |
Dsim\GD24897-PA | 510 | GD24897-PA | 99..140 | 253..294 | 155 | 52.4 | Plus |
Dsim\GD20788-PA | 877 | GD20788-PA | 756..827 | 229..299 | 154 | 37.5 | Plus |
Dsim\GD19873-PA | 537 | GD19873-PA | 210..284 | 229..301 | 150 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10303-PA | 382 | GJ10303-PA | 1..382 | 1..380 | 1213 | 66.5 | Plus |
Dvir\GJ10273-PA | 1174 | GJ10273-PA | 1047..1124 | 229..305 | 160 | 35.9 | Plus |
Dvir\GJ10332-PA | 114 | GJ10332-PA | 11..78 | 227..294 | 150 | 36.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11676-PA | 362 | GK11676-PA | 1..362 | 1..380 | 1179 | 67.6 | Plus |
Dwil\GK11818-PA | 846 | GK11818-PA | 726..803 | 229..303 | 157 | 39.7 | Plus |
Dwil\GK13091-PA | 147 | GK13091-PA | 44..117 | 227..300 | 144 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25922-PA | 380 | GE25922-PA | 1..380 | 1..380 | 1718 | 96.1 | Plus |
Dyak\GE10219-PA | 537 | GE10219-PA | 211..284 | 229..301 | 156 | 36.5 | Plus |
Dyak\GE11386-PA | 616 | GE11386-PA | 303..344 | 253..294 | 154 | 52.4 | Plus |
Dyak\GE24768-PA | 1040 | GE24768-PA | 919..990 | 229..299 | 153 | 37.5 | Plus |