BDGP Sequence Production Resources |
Search the DGRC for LD47064
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 470 |
Well: | 64 |
Vector: | pOT2 |
Associated Gene/Transcript | RpLP0-like-RA |
Protein status: | LD47064.pep: gold |
Preliminary Size: | 1043 |
Sequenced Size: | 932 |
Gene | Date | Evidence |
---|---|---|
CG1381 | 2001-10-10 | Blastp of sequenced clone |
CG1381 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1381 | 2008-04-29 | Release 5.5 accounting |
CG1381 | 2008-08-15 | Release 5.9 accounting |
CG1381 | 2008-12-18 | 5.12 accounting |
932 bp (932 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061517
> LD47064.complete TTCGGTGGGAAATATTCTTGGTTTCTGTTAAGAAAACGTTGCTATTTAAA GGCTACAGATATGCCGCGCTCCAAACGTGATAAGAAAGTTTCCCTGACCA AAACCGACCGCAAGGGTCTGGCTTGGAAACAGCGCATTGTGGACGACATT CGGTTCTGCGTGGGCAAATACCCAAATATATTCGTTTTCCAAGTTCAGAA CATGAGGAATAGCTTGCTGAAGGATCTGCGACAGGAGTTGAAAAAGAATT CTCGTTTTATCTTTGGCAAGAATCGTGTTATGCAGATTGGCTTGGGTCGC ACGAAGAGCGAGGAAGTGGAGCCGGAATTGCACAAGCTATCCAAGCGATT AACTGGCCAGGTGGGACTGCTTTTCACGGACAAATCCAAGGAGGAAGTCC TGGAGTGGGCAGAAAACTACTGGGCCGTGGAATACGCACGCAGTGGCTTT GTGGCCACGGAAACGGTTACCCTGCCAGCAGGTCCCCTAGAGGACTTCGC CCACTCTATGGAACCGCATCTGCGTTCCCTGGGCCTGCCCACCAAATTGG AGAAGGGAATCGTTACGCTGTACAGTGACTACACGGTTTGTGAGGAGGGC AAAGTTCTAACACCCGAACAGGCGAGAATCCTCAAGCTGGTGGGCAAGCC CATGGCCAAATTTCGGCTGACCATGAAGTGCTCGTGGACAAAAAGCGAAG GCTTCCAGCTGCATGTCGAGGATGATGTGAACGACGAGGAACAGGCTGAT AGCGCAATGGAAGAGGAGGCCGAGGCCGAGGCCATGGATGACAACGACGA CGATGATGACGAAGAGGAGGATGATGAATAAATAAGTTTAAGGCGTAGAA ATAATTTTTTTATGTATATATCAAGTGCAGAAAATATACGTATATTTTAA AAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 5986073..5986642 | 904..335 | 2850 | 100 | Minus |
chr2R | 21145070 | chr2R | 5986701..5986950 | 336..87 | 1250 | 100 | Minus |
chr2R | 21145070 | chr2R | 5987014..5987101 | 88..1 | 440 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 10098517..10099087 | 905..335 | 2855 | 100 | Minus |
2R | 25286936 | 2R | 10099146..10099395 | 336..87 | 1250 | 100 | Minus |
2R | 25286936 | 2R | 10099459..10099546 | 88..1 | 440 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 10099716..10100286 | 905..335 | 2855 | 100 | Minus |
2R | 25260384 | 2R | 10100345..10100594 | 336..87 | 1250 | 100 | Minus |
2R | 25260384 | 2R | 10100658..10100745 | 88..1 | 440 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 5986073..5986640 | 337..904 | 100 | <- | Minus |
chr2R | 5986701..5986948 | 89..336 | 100 | <- | Minus |
chr2R | 5987014..5987101 | 1..88 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1381-RA | 1..771 | 61..831 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpLP0-like-RA | 1..771 | 61..831 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpLP0-like-RA | 1..771 | 61..831 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1381-RA | 1..771 | 61..831 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpLP0-like-RA | 1..771 | 61..831 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1381-RA | 41..944 | 1..904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpLP0-like-RA | 41..944 | 1..904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpLP0-like-RA | 45..948 | 1..904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1381-RA | 41..944 | 1..904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpLP0-like-RA | 45..948 | 1..904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10099459..10099546 | 1..88 | 100 | Minus | |
2R | 10098518..10099085 | 337..904 | 100 | <- | Minus |
2R | 10099146..10099393 | 89..336 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10099459..10099546 | 1..88 | 100 | Minus | |
2R | 10098518..10099085 | 337..904 | 100 | <- | Minus |
2R | 10099146..10099393 | 89..336 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10099459..10099546 | 1..88 | 100 | Minus | |
2R | 10098518..10099085 | 337..904 | 100 | <- | Minus |
2R | 10099146..10099393 | 89..336 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 5986023..5986590 | 337..904 | 100 | <- | Minus |
arm_2R | 5986651..5986898 | 89..336 | 100 | <- | Minus |
arm_2R | 5986964..5987051 | 1..88 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10099717..10100284 | 337..904 | 100 | <- | Minus |
2R | 10100345..10100592 | 89..336 | 100 | <- | Minus |
2R | 10100658..10100745 | 1..88 | 100 | Minus |
Translation from 0 to 830
> LD47064.hyp FGGKYSWFLLRKRCYLKATDMPRSKRDKKVSLTKTDRKGLAWKQRIVDDI RFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGR TKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGF VATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEG KVLTPEQARILKLVGKPMAKFRLTMKCSWTKSEGFQLHVEDDVNDEEQAD SAMEEEAEAEAMDDNDDDDDEEEDDE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpLP0-like-PA | 256 | CG1381-PA | 1..256 | 21..276 | 1331 | 100 | Plus |
Translation from 60 to 830
> LD47064.pep MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRN SLLKDLRQELKKNSRFIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQ VGLLFTDKSKEEVLEWAENYWAVEYARSGFVATETVTLPAGPLEDFAHSM EPHLRSLGLPTKLEKGIVTLYSDYTVCEEGKVLTPEQARILKLVGKPMAK FRLTMKCSWTKSEGFQLHVEDDVNDEEQADSAMEEEAEAEAMDDNDDDDD EEEDDE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12908-PA | 258 | GF12908-PA | 1..241 | 1..242 | 1199 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25231-PA | 255 | GG25231-PA | 1..255 | 1..255 | 1335 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20636-PA | 247 | GH20636-PA | 1..219 | 1..219 | 1081 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpLP0-like-PA | 256 | CG1381-PA | 1..256 | 1..256 | 1331 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18999-PA | 259 | GI18999-PA | 1..222 | 1..222 | 1099 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16862-PA | 251 | GL16862-PA | 1..233 | 1..233 | 1152 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12545-PA | 252 | GA12545-PA | 1..233 | 1..233 | 1152 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20550-PA | 252 | GM20550-PA | 1..252 | 1..252 | 1321 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15262-PA | 256 | GD15262-PA | 1..256 | 1..256 | 1352 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19965-PA | 259 | GJ19965-PA | 1..233 | 1..233 | 1134 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21826-PA | 250 | GK21826-PA | 1..232 | 1..233 | 1121 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21775-PA | 254 | GE21775-PA | 1..254 | 1..256 | 1316 | 97.7 | Plus |