BDGP Sequence Production Resources |
Search the DGRC for LD47223
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 472 |
Well: | 23 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5044-RA |
Protein status: | LD47223.pep: gold |
Preliminary Size: | 1713 |
Sequenced Size: | 1667 |
Gene | Date | Evidence |
---|---|---|
CG5044 | 2001-01-01 | Release 2 assignment |
CG5044 | 2001-07-04 | Blastp of sequenced clone |
CG5044 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5044 | 2008-04-29 | Release 5.5 accounting |
CG5044 | 2008-08-15 | Release 5.9 accounting |
CG5044 | 2008-12-18 | 5.12 accounting |
1667 bp (1667 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052009
> LD47223.complete CTTCGCCCCACACACAACATTACTGACGACAGCCGCTCAAAATGGGCCCA ATTCAAAGGTTGGTGTACACATTTGGTCATCGCACCTGTAGCCAATTGCC GATGATCGGCGGAGCAACGATATCCCAAACAAAACCAACAACAATGGCTC TCTCCGTTCGCCAATCCTCCTCCTCCGTGCTGGCCACGGAGTCCTCTAAC AAGGGAATGATTATTCTGAACCGGCCCAAGGCGCTTAACGCCATCAACTT GGAGATGGTACGCAAGATCTACAAGCACCTGAAGAAGTGCGAGAAGTCCA AGTCGCTGGTGATCATCAAGGGCACAGGTGACAAGGCCTTCTGCGCCGGT GGAGATGTGCGCGCTCTGGTCGAGGCTGGCCCTACGGATGAGTCGAAGAG CTTCTTCCGGGAGGAGTACAGCACGAATGCCCTGATCGGAAACTATAAGA TTCCCTACATCGCCATCATTGACGGTATTACCATGGGCGGTGGCGTGGGT CTGAGTGTGCATGGCAAGTACCGGGTGGCCAGCGATCGGACACTGTTCGC CATGCCCGAGACGGCGATTGGCCTCTTCCCGGATGTGGGTGGATCATACT TCCTGCCTCGACTGCAGGGAAAGCTGGGCCTCTATCTGGGTCTCACAGGA TATCGACTGCGCGGAGCCGATGTCTATTACTCAGGCATTGCTACGCACTA CTGCGAGAGCAGCAAGATCCCTGATCTGGAGACGGCTCTCCTTAACTGCC CGGATGCGGATGATGTGCCTGAGCTGCTGCAGAAGTACCATTCCCCGCCA GAAAAGCCCTTCTCGCTGCAGCCTGTCCTGGAGCAGATCAACAAGAACTT TTCAGCGGACTCGGTGGAGGGGATTCTAGAGAATCTGCAGAACGATGGCA GTGAATGGGCCAAGAAGACGCTTGAGACGCTCTCGAAGATGTCTCCCACC TCGATGAAGGTTACGTTCCGTCAGTTGGAGCTCGGATCACAGCTGTCGCT GGCTCAGTGTCTTATTATGGAATATCGTCTGGCCGTGCGTCATCTGGAGC GAAGTGATTTCAAGGAGGGAGTGCGCGCCCTACTCATCGACAAGGATCAG AAGCCCCAGTGGCAGCCAACCAAGCTGGCCGATGTCACTGAGGAACATGT GCAGTGGTTTTTCCGCAAGCTACCGGACACCGAGGAACTCAAGCTGTAAT GTAGCAAGCTTAGTTTTGTTTTTGTTTGAGCCTTGGCATCCAATCCTGTT TGTCTTCCGTTGAGCCGCTCATTCTTATATGCACACAACTTAATATCTTT GTATATATCATTGCAAGCTTGAGTTATGTTATGCATGGTTCCTTGCCTGC CGTTTTGCAATATTCTTTATATATCTTTAGCGTTCTGTGGCCACAGTTTG ATGAGTTCTGTCGGCTAATTTTCCGCAATCTCTTCTCTGTTTCATTCCAA CAGCGAATAACTTCGAGGAAGAATCCTATTCGCCGGTATTTACCAATAAC GATTGTGAAATTCAATGCATTTAAATATATGATATACATATATGCCTATA TATATTATGTACAATTCGTAGTCCTAATACAATCAATAATTGTGCCTAAA GAATCGTTAGAATTCGTTTACCAAGAATAAAAAGAAGTGTATACGTTTAA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5044-RA | 1824 | CG5044-RA | 177..1824 | 1..1648 | 8240 | 100 | Plus |
CG5044-RB | 1827 | CG5044-RB | 177..1827 | 1..1648 | 8185 | 99.8 | Plus |
CG5044.a | 1569 | CG5044.a | 177..1374 | 1..1195 | 5920 | 99.7 | Plus |
CG5044.a | 1569 | CG5044.a | 1375..1569 | 1454..1648 | 975 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 11182027..11182909 | 44..926 | 4415 | 100 | Plus |
chr3R | 27901430 | chr3R | 11183172..11183895 | 925..1648 | 3620 | 100 | Plus |
chr3R | 27901430 | chr3R | 11181912..11181956 | 1..45 | 225 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 15357392..15358274 | 44..926 | 4415 | 100 | Plus |
3R | 32079331 | 3R | 15358537..15359262 | 925..1650 | 3630 | 100 | Plus |
3R | 32079331 | 3R | 15357277..15357321 | 1..45 | 225 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 15098223..15099105 | 44..926 | 4415 | 100 | Plus |
3R | 31820162 | 3R | 15099368..15100093 | 925..1650 | 3630 | 100 | Plus |
3R | 31820162 | 3R | 15098108..15098152 | 1..45 | 225 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11181912..11181955 | 1..44 | 100 | -> | Plus |
chr3R | 11182028..11182909 | 45..926 | 100 | -> | Plus |
chr3R | 11183174..11183895 | 927..1648 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5044-RA | 1..1158 | 42..1199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5044-RA | 1..1158 | 42..1199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5044-RA | 1..1158 | 42..1199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5044-RA | 1..1158 | 42..1199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5044-RA | 1..1158 | 42..1199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5044-RA | 33..1680 | 1..1648 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5044-RA | 33..1680 | 1..1648 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5044-RA | 49..1696 | 1..1648 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5044-RA | 33..1680 | 1..1648 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5044-RA | 49..1696 | 1..1648 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15357277..15357320 | 1..44 | 100 | -> | Plus |
3R | 15357393..15358274 | 45..926 | 100 | -> | Plus |
3R | 15358539..15359260 | 927..1648 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15357277..15357320 | 1..44 | 100 | -> | Plus |
3R | 15357393..15358274 | 45..926 | 100 | -> | Plus |
3R | 15358539..15359260 | 927..1648 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15357277..15357320 | 1..44 | 100 | -> | Plus |
3R | 15357393..15358274 | 45..926 | 100 | -> | Plus |
3R | 15358539..15359260 | 927..1648 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11182999..11183042 | 1..44 | 100 | -> | Plus |
arm_3R | 11183115..11183996 | 45..926 | 100 | -> | Plus |
arm_3R | 11184261..11184982 | 927..1648 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15098108..15098151 | 1..44 | 100 | -> | Plus |
3R | 15098224..15099105 | 45..926 | 100 | -> | Plus |
3R | 15099370..15100091 | 927..1648 | 100 | Plus |
Translation from 41 to 1198
> LD47223.pep MGPIQRLVYTFGHRTCSQLPMIGGATISQTKPTTMALSVRQSSSSVLATE SSNKGMIILNRPKALNAINLEMVRKIYKHLKKCEKSKSLVIIKGTGDKAF CAGGDVRALVEAGPTDESKSFFREEYSTNALIGNYKIPYIAIIDGITMGG GVGLSVHGKYRVASDRTLFAMPETAIGLFPDVGGSYFLPRLQGKLGLYLG LTGYRLRGADVYYSGIATHYCESSKIPDLETALLNCPDADDVPELLQKYH SPPEKPFSLQPVLEQINKNFSADSVEGILENLQNDGSEWAKKTLETLSKM SPTSMKVTFRQLELGSQLSLAQCLIMEYRLAVRHLERSDFKEGVRALLID KDQKPQWQPTKLADVTEEHVQWFFRKLPDTEELKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23000-PA | 351 | GF23000-PA | 1..351 | 35..385 | 1787 | 94 | Plus |
Dana\GF11161-PA | 293 | GF11161-PA | 43..230 | 47..228 | 204 | 29.8 | Plus |
Dana\GF11465-PA | 299 | GF11465-PA | 43..225 | 50..228 | 172 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16921-PA | 385 | GG16921-PA | 1..385 | 1..385 | 2010 | 97.1 | Plus |
Dere\GG22466-PA | 294 | GG22466-PA | 25..214 | 37..218 | 207 | 31.1 | Plus |
Dere\GG22562-PA | 299 | GG22562-PA | 51..225 | 56..228 | 174 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16630-PA | 354 | GH16630-PA | 6..354 | 38..385 | 1656 | 87.1 | Plus |
Dgri\GH20865-PA | 293 | GH20865-PA | 46..213 | 50..218 | 186 | 31 | Plus |
Dgri\GH22640-PA | 298 | GH22640-PA | 53..224 | 59..228 | 170 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5044-PA | 385 | CG5044-PA | 1..385 | 1..385 | 1986 | 100 | Plus |
CG5044-PB | 386 | CG5044-PB | 3..386 | 2..385 | 1981 | 100 | Plus |
Echs1-PA | 295 | CG6543-PA | 45..215 | 47..218 | 205 | 31.6 | Plus |
Echs1-PB | 295 | CG6543-PB | 45..215 | 47..218 | 205 | 31.6 | Plus |
CG8778-PA | 299 | CG8778-PA | 51..225 | 56..228 | 174 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22035-PA | 354 | GI22035-PA | 3..354 | 35..385 | 1664 | 87.8 | Plus |
Dmoj\GI20973-PA | 293 | GI20973-PA | 5..213 | 17..218 | 187 | 27.9 | Plus |
Dmoj\GI21154-PA | 301 | GI21154-PA | 56..227 | 59..228 | 173 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13727-PA | 394 | GL13727-PA | 4..394 | 3..385 | 1785 | 88 | Plus |
Dper\GL16995-PA | 296 | GL16995-PA | 58..216 | 49..218 | 148 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18617-PA | 394 | GA18617-PA | 4..394 | 3..385 | 1785 | 88 | Plus |
Dpse\GA19673-PB | 296 | GA19673-PB | 49..216 | 50..218 | 207 | 32.2 | Plus |
Dpse\GA19673-PA | 296 | GA19673-PA | 49..216 | 50..218 | 207 | 32.2 | Plus |
Dpse\GA21314-PA | 298 | GA21314-PA | 42..224 | 50..228 | 166 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24227-PA | 351 | GM24227-PA | 1..351 | 35..385 | 1843 | 98.3 | Plus |
Dsec\GM20252-PA | 294 | GM20252-PA | 25..214 | 37..218 | 201 | 30.6 | Plus |
Dsec\GM20345-PA | 233 | GM20345-PA | 2..159 | 70..228 | 151 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19018-PA | 351 | GD19018-PA | 1..351 | 35..385 | 1850 | 98.9 | Plus |
Dsim\GD25738-PA | 294 | GD25738-PA | 25..214 | 37..218 | 201 | 30.6 | Plus |
Dsim\GD25824-PA | 299 | GD25824-PA | 51..225 | 56..228 | 172 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10482-PA | 354 | GJ10482-PA | 3..354 | 35..385 | 1668 | 87.8 | Plus |
Dvir\GJ20693-PA | 293 | GJ20693-PA | 46..213 | 50..218 | 184 | 30.5 | Plus |
Dvir\GJ21004-PA | 281 | GJ21004-PA | 25..207 | 50..228 | 177 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11777-PA | 351 | GK11777-PA | 1..351 | 35..385 | 1733 | 90.3 | Plus |
Dwil\GK17937-PA | 295 | GK17937-PA | 48..215 | 50..218 | 205 | 32.2 | Plus |
Dwil\GK15915-PA | 302 | GK15915-PA | 46..228 | 50..228 | 184 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24304-PA | 351 | GE24304-PA | 1..351 | 35..385 | 1853 | 98.9 | Plus |
Dyak\GE13337-PA | 294 | GE13337-PA | 25..214 | 37..218 | 211 | 31.6 | Plus |
Dyak\GE13432-PA | 299 | GE13432-PA | 51..225 | 56..228 | 179 | 29 | Plus |
Translation from 41 to 1198
> LD47223.hyp MGPIQRLVYTFGHRTCSQLPMIGGATISQTKPTTMALSVRQSSSSVLATE SSNKGMIILNRPKALNAINLEMVRKIYKHLKKCEKSKSLVIIKGTGDKAF CAGGDVRALVEAGPTDESKSFFREEYSTNALIGNYKIPYIAIIDGITMGG GVGLSVHGKYRVASDRTLFAMPETAIGLFPDVGGSYFLPRLQGKLGLYLG LTGYRLRGADVYYSGIATHYCESSKIPDLETALLNCPDADDVPELLQKYH SPPEKPFSLQPVLEQINKNFSADSVEGILENLQNDGSEWAKKTLETLSKM SPTSMKVTFRQLELGSQLSLAQCLIMEYRLAVRHLERSDFKEGVRALLID KDQKPQWQPTKLADVTEEHVQWFFRKLPDTEELKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5044-PA | 385 | CG5044-PA | 1..385 | 1..385 | 1986 | 100 | Plus |
CG5044-PB | 386 | CG5044-PB | 3..386 | 2..385 | 1981 | 100 | Plus |
CG6543-PA | 295 | CG6543-PA | 45..215 | 47..218 | 205 | 31.6 | Plus |
CG6543-PB | 295 | CG6543-PB | 45..215 | 47..218 | 205 | 31.6 | Plus |
CG8778-PA | 299 | CG8778-PA | 51..225 | 56..228 | 174 | 28.4 | Plus |