Clone LD47264 Report

Search the DGRC for LD47264

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:472
Well:64
Vector:pOT2
Associated Gene/TranscriptCG5966-RA
Protein status:LD47264.pep: gold
Preliminary Size:2506
Sequenced Size:2620

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5966 2001-01-01 Release 2 assignment
CG5966 2001-09-19 Blastp of sequenced clone
CG5966 2003-01-01 Sim4 clustering to Release 3
CG5966 2008-04-29 Release 5.5 accounting
CG5966 2008-08-15 Release 5.9 accounting
CG5966 2008-12-18 5.12 accounting

Clone Sequence Records

LD47264.complete Sequence

2620 bp (2620 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058727

> LD47264.complete
TCCAAGCGACTCAGATCGGCGGAGATATACACGACATATAGCCCAGTCAT
TGGCGATAGTCAAAATCGAAAGAAACCGAGGGCCGCCAACTAACCTAACA
AGCTAACGGCACACTCGAGACGAAAGACAGTCGATAAGATTAACGTCAAC
TTAATTAAAACTATAGAAAAGAAAAGCCAGGCACCAAACAAAAGGCCGAT
CGATCAATCGATCGATCCCATCGTAACTCGACTATACAGTCCTAGCCTTA
GATAATAGCCAACTCGAGTGGCACTCGTTCAAGTGATTTGTGATTGTGGT
TCAGTTAAGAACTGACTAAAGCCCTGGGAAAAAGTGTGTGATTCAAGTTG
GGAATTTCCAAGATCCCCAGGATCTAAGGGATCACATTTGGCATCGGAAT
CGGAATCGGAATCAGATACAGCTGCAGGATGTATGTGGCCAACACGACGG
GCGGCCTAATGCTGCAGACCATGTTGTATTTGGCCAACCACACCAGTCGG
GCGGCAGTCAACACCCTGGTGGACCTACCACCAGCTCCCAAAAGTGACAT
CAACGAGGTAAAATGCTTCGGAGTGTATGGCTGTTTTCCGATCAATGGAC
CCTGGAACACGGTGACCCGTTCGATAAATGTGCATCCGCAGAAGCCTTCG
GAGATCGAGCCCCATTTCACACTGCACACGCGAAGGGCATTGGATCAGCC
CAAGTATCTGGATCTCAATGATCCAGAAAGCGTTCAAGGCATGGGAATGA
ATCCCAAGGGCAAGATATTCCTGCTTGTCCATGGATACCTGGAGTCCGGT
GAAATTCCCTGGATGTGGGACATGGCCAAGGCGCTGCTGGCCCACGAGCC
CGAGGGTCGGGCATCCGTGGTCCTCATCGATTGGGGCGGTGGCGCTAGTC
CGCCGTATGTCCAGGCGGTTGCCAATATCCGGCTAGTGGGCGCCATCACC
GCCCATGTGGTGCACATGCTGTACGAGGAGTTGCGTCTTCCGAATCTGGA
CAATGTGCACATCATTGGTCACTCACTGGGTGCCCATCTGTCCGGCTATG
CCGGCTATCACCTGCAGCACGACTTTGGACTGAAACCGGCCAGGATAACG
GGTCTGGATCCGGCTGCTCCTCTCTTCACGGACACCGATCCCATCGTGCG
GCTGGACAAGACGGATGCCCACTTCGTGGACATTGTGCACACGGATGCCA
ATCCCCTGATGAAAGGCGGGCTTGGCATCAATATGCGACTGGGACATGTG
GACTTCTTTCCCAACGGTGGTTTCGATAATCCCGGCTGCAACAAGAAGTT
CCAGGATGTGGTCAAGAAGAAGACGCTGTTCCTCACCATGCAGGAGTTCC
TCGGCTGCAATCACATTCGCAGTCAGCAGTATTTTACGGAAAGCATCGGC
TCGCAGTGTCCTTTCCTTGGAATAACCTGTGATTCTTTCGAGAGCTTTAA
GGACACGAAGTGCACCAGTTGCGAGGAGCCGGGCCACACGTGCCTGCGAA
TGGGCTACCACAGCCAGGAGGATTACCAGGAGCAGGTTGATCTTGGCCAG
CTGCAGCAAGGCGACTCACCAGGGGTCTTCTACCTATGGACTGGAGATAG
CAAGCCCTTCTGCCGACTGCACTATAGGATAACAGTGCGAGTTTCCGGAC
ACGATGAGAGTACGCTACATGGCGGCGAGGTGGGCATCCTGTCCATTCAG
CTGCACGATGCCCTGGTGAAGAAGGCTGGCAAAAATGAGCGAGCCGCCAC
GGAGATGATGAAGTTCTCCCAGAAGGCAATGTACTTTGAGCCGGGCTATG
AATACAAAGCTTTGGTGGCCGGACGGAATCTCCGAGAGCCGGAGTACGCG
ACTGTTAATTGGGAGTACCCCACCAATATACTGAATCCACTCACATGGCG
CATCCTATCCGCGCCGCGTATCTACTTGGAGTACATCCTCATCGAGGCGA
TGGAGTCCAGCGACCTATACCTAAAGTTATGTCCTCAGCACGAAGGAGCC
ATTCTCACGGGCGCTGAAAATGTCCTGCGCTCCAGCTATTGCAAGGATTA
ATATCAACCTGTTTACTTGATAATTTATTGGCTAATTGATGATAATATTA
TCATTTCAATTAATTGATTAATTATCCACTAAATTCGGAACTGTATGTAA
GCTATATCATTACTTAATTAGCTAATTAATTTGTAATTTTGCTCATGTCT
AATGATTAATTGGCTAATTAATTAAGAACTCAGCTCACACTTTCTCAGCA
CCCAATATGATTGCGTAGAAAATCAAAGAAAGCAGTGCAGGTTTGCGTCA
CCGCTAAGTTGTTTGCACAACCAGAAGTGGCACAGATGCAGATGCGTGTC
TGCGCTGTGGGAACAGATCGAAAAAGTGTTCCCAGTTTGACTTTTATAGC
AACTCGCTGAGAAGGAACAGTTTGTATTTTATTATAGTATTTTAATAGTT
CGAAATACGAAACAATCATCAAACCGTTATTTATTTTATAAAATAATATG
TTTCATATACAATATATTTTTTTTTTTGAGTTAAATGTATTTGTAGTCGT
AGTGCACTGATGTAGTCTAATTTAATGTAAATAAACATGCAAATATACAA
AAAAAAAAAAAAAAAAAAAA

LD47264.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:16:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG5966-RA 2673 CG5966-RA 45..2645 1..2601 13005 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:03:03
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 5883792..5884951 1441..2598 5640 99.5 Plus
chrX 22417052 chrX 5882798..5883694 546..1442 4485 100 Plus
chrX 22417052 chrX 5881122..5881666 2..546 2695 99.6 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:43:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:03:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5991483..5992643 1441..2601 5805 100 Plus
X 23542271 X 5990489..5991385 546..1442 4485 100 Plus
X 23542271 X 5988812..5989357 1..546 2730 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:40:18
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 5999581..6000741 1441..2601 5805 100 Plus
X 23527363 X 5998587..5999483 546..1442 4485 100 Plus
X 23527363 X 5996910..5997455 1..546 2730 100 Plus
Blast to na_te.dros performed 2019-03-16 06:03:01
Subject Length Description Subject Range Query Range Score Percent Strand
Tabor 7345 Tabor TABOR 7345bp 6742..6804 2544..2479 134 69.7 Minus
Doc 4725 Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). 120..242 2528..2404 132 62.5 Minus

LD47264.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:04:08 Download gff for LD47264.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 5881120..5881666 1..546 99 -> Plus
chrX 5882799..5883694 547..1442 100 -> Plus
chrX 5883794..5884421 1443..2070 99 == Plus
chrX 5884577..5884828 2226..2476 98 == Plus
chrX 5884881..5884951 2528..2598 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:31:01 Download gff for LD47264.complete
Subject Subject Range Query Range Percent Splice Strand
CG5966-RA 1..1623 429..2051 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:58:55 Download gff for LD47264.complete
Subject Subject Range Query Range Percent Splice Strand
CG5966-RA 1..1623 429..2051 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:15:08 Download gff for LD47264.complete
Subject Subject Range Query Range Percent Splice Strand
CG5966-RA 1..1623 429..2051 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:29:17 Download gff for LD47264.complete
Subject Subject Range Query Range Percent Splice Strand
CG5966-RA 1..1623 429..2051 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:14:11 Download gff for LD47264.complete
Subject Subject Range Query Range Percent Splice Strand
CG5966-RA 1..1623 429..2051 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:45:52 Download gff for LD47264.complete
Subject Subject Range Query Range Percent Splice Strand
CG5966-RA 1..2598 1..2598 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:58:54 Download gff for LD47264.complete
Subject Subject Range Query Range Percent Splice Strand
CG5966-RA 1..2598 1..2598 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:15:08 Download gff for LD47264.complete
Subject Subject Range Query Range Percent Splice Strand
CG5966-RA 22..2619 1..2598 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:29:17 Download gff for LD47264.complete
Subject Subject Range Query Range Percent Splice Strand
CG5966-RA 1..2598 1..2598 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:14:11 Download gff for LD47264.complete
Subject Subject Range Query Range Percent Splice Strand
CG5966-RA 22..2619 1..2598 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:04:08 Download gff for LD47264.complete
Subject Subject Range Query Range Percent Splice Strand
X 5988812..5989357 1..546 100 -> Plus
X 5990490..5991385 547..1442 100 -> Plus
X 5991485..5992640 1443..2598 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:04:08 Download gff for LD47264.complete
Subject Subject Range Query Range Percent Splice Strand
X 5988812..5989357 1..546 100 -> Plus
X 5990490..5991385 547..1442 100 -> Plus
X 5991485..5992640 1443..2598 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:04:08 Download gff for LD47264.complete
Subject Subject Range Query Range Percent Splice Strand
X 5988812..5989357 1..546 100 -> Plus
X 5990490..5991385 547..1442 100 -> Plus
X 5991485..5992640 1443..2598 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:15:08 Download gff for LD47264.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 5882845..5883390 1..546 100 -> Plus
arm_X 5884523..5885418 547..1442 100 -> Plus
arm_X 5885518..5886673 1443..2598 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:05:35 Download gff for LD47264.complete
Subject Subject Range Query Range Percent Splice Strand
X 5996910..5997455 1..546 100 -> Plus
X 5998588..5999483 547..1442 100 -> Plus
X 5999583..6000738 1443..2598 100   Plus

LD47264.pep Sequence

Translation from 428 to 2050

> LD47264.pep
MYVANTTGGLMLQTMLYLANHTSRAAVNTLVDLPPAPKSDINEVKCFGVY
GCFPINGPWNTVTRSINVHPQKPSEIEPHFTLHTRRALDQPKYLDLNDPE
SVQGMGMNPKGKIFLLVHGYLESGEIPWMWDMAKALLAHEPEGRASVVLI
DWGGGASPPYVQAVANIRLVGAITAHVVHMLYEELRLPNLDNVHIIGHSL
GAHLSGYAGYHLQHDFGLKPARITGLDPAAPLFTDTDPIVRLDKTDAHFV
DIVHTDANPLMKGGLGINMRLGHVDFFPNGGFDNPGCNKKFQDVVKKKTL
FLTMQEFLGCNHIRSQQYFTESIGSQCPFLGITCDSFESFKDTKCTSCEE
PGHTCLRMGYHSQEDYQEQVDLGQLQQGDSPGVFYLWTGDSKPFCRLHYR
ITVRVSGHDESTLHGGEVGILSIQLHDALVKKAGKNERAATEMMKFSQKA
MYFEPGYEYKALVAGRNLREPEYATVNWEYPTNILNPLTWRILSAPRIYL
EYILIEAMESSDLYLKLCPQHEGAILTGAENVLRSSYCKD*

LD47264.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 10:23:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22088-PA 541 GF22088-PA 1..541 1..540 2599 87.7 Plus
Dana\GF19363-PA 1024 GF19363-PA 199..485 113..409 447 36.5 Plus
Dana\GF11422-PA 349 GF11422-PA 2..284 82..396 373 33.2 Plus
Dana\GF22963-PA 338 GF22963-PA 66..310 80..353 305 31.8 Plus
Dana\GF14403-PA 361 GF14403-PA 46..344 62..396 304 28.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:23:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18809-PA 540 GG18809-PA 1..540 1..540 2890 98.1 Plus
Dere\GG19142-PA 1004 GG19142-PA 192..478 113..409 440 35.9 Plus
Dere\GG20643-PA 394 GG20643-PA 51..334 80..396 363 34.3 Plus
Dere\GG24523-PA 348 GG24523-PA 33..331 62..396 314 28.9 Plus
Dere\GG24519-PA 353 GG24519-PA 17..278 89..395 313 32.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 10:23:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24383-PA 546 GH24383-PA 1..546 1..540 2315 77.1 Plus
Dgri\GH12446-PA 991 GH12446-PA 73..473 46..409 465 32.3 Plus
Dgri\GH22648-PA 371 GH22648-PA 32..316 80..396 370 33 Plus
Dgri\GH18961-PA 336 GH18961-PA 64..314 80..363 322 31.7 Plus
Dgri\GH13774-PA 475 GH13774-PA 103..310 107..340 309 36.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG5966-PA 540 CG5966-PA 1..540 1..540 2917 100 Plus
CG5966-PB 436 CG5966-PB 1..436 105..540 2354 100 Plus
CG6847-PB 1000 CG6847-PB 73..478 46..409 439 30.1 Plus
CG6847-PA 1000 CG6847-PA 73..478 46..409 439 30.1 Plus
CG6472-PB 389 CG6472-PB 46..329 80..396 351 33.6 Plus
CG7367-PD 358 CG7367-PD 32..320 13..346 334 30.9 Plus
CG7367-PB 358 CG7367-PB 32..320 13..346 334 30.9 Plus
CG7367-PC 389 CG7367-PC 63..351 13..346 334 30.9 Plus
CG1986-PB 404 CG1986-PB 89..345 107..394 316 31.4 Plus
CG1986-PA 404 CG1986-PA 89..345 107..394 316 31.4 Plus
CG34447-PA 389 CG34447-PA 44..313 80..394 315 30.7 Plus
CG34447-PB 389 CG34447-PB 44..313 80..394 315 30.7 Plus
CG18641-PC 369 CG18641-PC 54..352 62..396 310 28.6 Plus
CG14034-PC 338 CG14034-PC 111..289 158..361 299 37.3 Plus
CG14034-PB 338 CG14034-PB 111..289 158..361 299 37.3 Plus
CG6295-PA 338 CG6295-PA 66..312 80..359 292 30.4 Plus
CG13282-PB 484 CG13282-PB 110..351 108..394 290 31.9 Plus
CG13282-PA 484 CG13282-PA 110..351 108..394 290 31.9 Plus
CG10357-PC 321 CG10357-PC 57..313 115..394 276 32.6 Plus
CG6271-PA 341 CG6271-PA 89..315 100..359 276 30.4 Plus
CG6675-PC 386 CG6675-PC 103..381 67..394 275 27.4 Plus
CG6675-PB 390 CG6675-PB 107..385 67..394 275 27.4 Plus
CG34448-PA 344 CG34448-PA 34..322 68..396 272 28.5 Plus
CG4582-PA 432 CG4582-PA 146..413 94..394 270 28.4 Plus
CG6277-PA 341 CG6277-PA 89..332 100..371 269 30 Plus
CG5162-PB 411 CG5162-PB 156..349 138..360 269 33.6 Plus
CG5162-PA 411 CG5162-PA 156..349 138..360 269 33.6 Plus
CG6283-PA 339 CG6283-PA 87..313 101..359 258 29 Plus
CG17292-PD 340 CG17292-PD 63..310 115..396 249 29.5 Plus
CG17292-PC 340 CG17292-PC 63..310 115..396 249 29.5 Plus
CG17292-PB 340 CG17292-PB 63..310 115..396 249 29.5 Plus
CG17292-PA 340 CG17292-PA 63..310 115..396 249 29.5 Plus
CG10116-PA 289 CG10116-PA 58..287 147..402 248 28.4 Plus
CG17192-PA 337 CG17192-PA 52..303 67..347 246 26.3 Plus
CG5665-PB 376 CG5665-PB 147..328 143..347 246 34.1 Plus
CG17191-PA 337 CG17191-PA 123..311 142..359 241 29.8 Plus
CG4267-PB 374 CG4267-PB 64..311 70..335 238 26.5 Plus
CG4267-PA 374 CG4267-PA 64..311 70..335 238 26.5 Plus
sxe2-PB 387 CG4979-PB 73..360 80..394 220 25.7 Plus
sxe2-PA 387 CG4979-PA 73..360 80..394 220 25.7 Plus
CG5665-PC 395 CG5665-PC 147..347 143..347 216 31.3 Plus
CG6296-PA 676 CG6296-PA 92..309 100..345 208 26 Plus
Yp2-PB 442 CG2979-PB 205..406 147..371 200 28.6 Plus
Yp2-PA 442 CG2979-PA 205..406 147..371 200 28.6 Plus
Yp1-PB 439 CG2985-PB 204..377 147..341 199 28.3 Plus
Yp1-PA 439 CG2985-PA 204..377 147..341 199 28.3 Plus
CG18258-PA 468 CG18258-PA 226..393 132..323 189 32.1 Plus
CG6431-PB 346 CG6431-PB 72..286 94..334 181 26.9 Plus
CG6431-PC 351 CG6431-PC 77..291 94..334 181 26.9 Plus
Yp3-PB 420 CG11129-PB 173..368 118..342 179 28.1 Plus
Yp3-PA 420 CG11129-PA 173..368 118..342 179 28.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 10:23:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15322-PA 537 GI15322-PA 1..537 1..540 2306 75.7 Plus
Dmoj\GI14674-PA 978 GI14674-PA 67..472 46..409 463 31.5 Plus
Dmoj\GI21161-PA 396 GI21161-PA 46..330 80..397 353 33.9 Plus
Dmoj\GI17178-PA 468 GI17178-PA 97..301 107..337 316 36.6 Plus
Dmoj\GI22497-PA 399 GI22497-PA 64..354 13..346 309 30.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 10:23:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14903-PA 546 GL14903-PA 1..546 1..540 2572 87 Plus
Dper\GL26468-PA 383 GL26468-PA 43..312 80..394 330 32.6 Plus
Dper\GL26469-PA 348 GL26469-PA 33..331 62..396 307 28.6 Plus
Dper\GL14933-PA 990 GL14933-PA 201..438 113..409 304 30.8 Plus
Dper\GL23622-PA 341 GL23622-PA 104..315 115..359 301 32.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 10:23:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19265-PA 546 GA19265-PA 1..546 1..540 2569 86.8 Plus
Dpse\GA22200-PA 1040 GA22200-PA 201..487 113..409 444 36.5 Plus
Dpse\GA28874-PA 383 GA28874-PA 43..312 80..394 324 32.6 Plus
Dpse\GA15027-PA 348 GA15027-PA 33..331 62..396 307 28.6 Plus
Dpse\GA26667-PA 341 GA26667-PA 104..315 115..359 305 32.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:23:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12459-PA 540 GM12459-PA 1..540 1..540 2909 99.3 Plus
Dsec\GM22867-PA 1000 GM22867-PA 73..478 46..409 448 30.8 Plus
Dsec\GM21737-PA 394 GM21737-PA 51..334 80..396 366 34.3 Plus
Dsec\GM18230-PA 348 GM18230-PA 33..331 62..396 314 28.9 Plus
Dsec\GM18227-PA 389 GM18227-PA 44..313 80..394 307 30.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:23:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16776-PA 540 GD16776-PA 1..540 1..540 2915 99.4 Plus
Dsim\GD17376-PA 1000 GD17376-PA 73..478 46..409 447 30.8 Plus
Dsim\GD11231-PA 394 GD11231-PA 51..334 80..396 365 34.3 Plus
Dsim\GD17823-PA 389 GD17823-PA 44..313 80..394 316 31 Plus
Dsim\GD18105-PA 338 GD18105-PA 66..312 80..359 302 30.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 10:23:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14759-PA 537 GJ14759-PA 1..537 1..540 2386 80.3 Plus
Dvir\GJ16583-PA 979 GJ16583-PA 194..480 113..409 450 35.9 Plus
Dvir\GJ21013-PA 371 GJ21013-PA 46..351 80..408 353 32.1 Plus
Dvir\GJ24215-PA 350 GJ24215-PA 35..333 62..396 318 29.5 Plus
Dvir\GJ22109-PA 446 GJ22109-PA 76..280 107..337 310 35.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 10:23:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20136-PA 537 GK20136-PA 1..537 1..540 2386 80.3 Plus
Dwil\GK15147-PA 927 GK15147-PA 40..439 46..409 468 32.2 Plus
Dwil\GK22029-PA 364 GK22029-PA 29..322 80..403 349 32.8 Plus
Dwil\GK23738-PA 339 GK23738-PA 24..322 62..396 300 28 Plus
Dwil\GK18152-PA 428 GK18152-PA 58..264 107..340 295 35.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:23:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17570-PA 540 GE17570-PA 1..540 1..540 2891 98.5 Plus
Dyak\GE17699-PA 998 GE17699-PA 73..471 46..409 451 30.6 Plus
Dyak\GE11832-PA 400 GE11832-PA 51..334 80..396 345 34.3 Plus
Dyak\GE15114-PA 348 GE15114-PA 33..331 62..396 314 28.9 Plus
Dyak\GE15105-PA 370 GE15105-PA 44..312 80..394 312 30.1 Plus

LD47264.hyp Sequence

Translation from 428 to 2050

> LD47264.hyp
MYVANTTGGLMLQTMLYLANHTSRAAVNTLVDLPPAPKSDINEVKCFGVY
GCFPINGPWNTVTRSINVHPQKPSEIEPHFTLHTRRALDQPKYLDLNDPE
SVQGMGMNPKGKIFLLVHGYLESGEIPWMWDMAKALLAHEPEGRASVVLI
DWGGGASPPYVQAVANIRLVGAITAHVVHMLYEELRLPNLDNVHIIGHSL
GAHLSGYAGYHLQHDFGLKPARITGLDPAAPLFTDTDPIVRLDKTDAHFV
DIVHTDANPLMKGGLGINMRLGHVDFFPNGGFDNPGCNKKFQDVVKKKTL
FLTMQEFLGCNHIRSQQYFTESIGSQCPFLGITCDSFESFKDTKCTSCEE
PGHTCLRMGYHSQEDYQEQVDLGQLQQGDSPGVFYLWTGDSKPFCRLHYR
ITVRVSGHDESTLHGGEVGILSIQLHDALVKKAGKNERAATEMMKFSQKA
MYFEPGYEYKALVAGRNLREPEYATVNWEYPTNILNPLTWRILSAPRIYL
EYILIEAMESSDLYLKLCPQHEGAILTGAENVLRSSYCKD*

LD47264.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:07:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG5966-PA 540 CG5966-PA 1..540 1..540 2917 100 Plus
CG5966-PB 436 CG5966-PB 1..436 105..540 2354 100 Plus
CG6847-PB 1000 CG6847-PB 73..478 46..409 439 30.1 Plus
CG6847-PA 1000 CG6847-PA 73..478 46..409 439 30.1 Plus
CG6472-PB 389 CG6472-PB 46..329 80..396 351 33.6 Plus