BDGP Sequence Production Resources |
Search the DGRC for LD47277
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 472 |
Well: | 77 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11367-RA |
Protein status: | LD47277.pep: gold |
Preliminary Size: | 1867 |
Sequenced Size: | 1820 |
Gene | Date | Evidence |
---|---|---|
CG11367 | 2001-01-01 | Release 2 assignment |
CG11367 | 2001-07-04 | Blastp of sequenced clone |
CG11367 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11367 | 2008-04-29 | Release 5.5 accounting |
CG11367 | 2008-08-15 | Release 5.9 accounting |
CG11367 | 2008-12-18 | 5.12 accounting |
1820 bp (1820 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052011
> LD47277.complete GAACTCGAAGTTCCAGTCGGAACGTCAACGTCGAGTGGGCAGTCGTACGT CGATTGTTGAGCGGCTGTGGCACATATATAAACAATAAATACAATTCGTA ATTTTAATTGAATTAAGACAATAACAACAACGGTTTCTGGGACTCGGTTG CCTTGCCATATGTGACACAAAGCACACACATGCGACCGTAAACTCAGAAC TCTGTATTTGCGCGAATGTGGGTGCATAAAAGTGAAATTTCACAGCGACA AGTGGAAAAGAAAACGGAGAAAGGCAGAGCTGTGGCCAAAAGAAAATCCT GGTCATGTCATGCAACAATAACAACAACTATAAAAACAAAACCACGTACG GCTATTCGAACAACAATGATACCAACTGCATCATGCAGAAGCCAGTGCCC GCCTCCACCGCACCCGCCTTCCCTCAGCTGATCCAGGCCAGCTGTTCCAA CGCCGTGGAGGTGGATCCACCAGACAGCATTGTGGGGGCTGCCGGCAACT CCGAAGCTCTCTTCGCCGCCCAGCGCACACCGGACACGTCGGAGGACAGC GAATGTGACCCGTTTCTAGCCAGTCGGAGAGCTACCCGCTCCTCCGCCAC CACCTCTGTGCTACACAACCGGAAGCGCAACTCGTGTTGGGGACGAGCCC ACAGCTTTCTCACCCGCAACTGGTACCTGGGCTGCTTAGTGCCCGCCACC ATTCTAGGCGCCCTCGTCTTCATCGGATGGGCGACGCGGGACTATGCTCG CCAATTGCTCTTTTGGATCGAAATGCAGAACGCCTGGATAACATTTGCCG TCTACATGGGGCTCTTCGCTCTTGTCAGCTTCCCCGTGGTGGTGGGCTAC TTCGTTCTGCTCATCACCGCCGGTTACCTGTTCGGCTGCCTGCGCGGTTG GGTCACCGTGATCCTGGGCGCCAATATCGGCATAGCCGTGGCCCATGCCA CCATTCGCAGCTGCCGGCACCGCATTCCCGTCCAAAGGCTGATCAAGAAT GATACGGGACGAGCCATTCTTCGCGTCATTTCTGGCCCAAAGGCATTTCG AGTCGTTCTCTTTACCCGACTTACCCCCATTCCCTTCGGAGTGCAGAATG TGATATTCGGAATCAGTTCCATCAACACAAGAGACTACCATGTGGCCACG CTGATTGGTTTGCTGCCAGCCCAAACCATCAATGTTTACTTGGGTTCCAC GCTAAGGTCCATGCATGAAGTGCTCAGTGATAACGATACCAAACTGACGG GGTATATCAGCTTCCTGTTTGAGGTAATTTGCGGCGTGGCCTTGATGTTC TGGGTATTGCAGAAGGCCAGAAAGGAGCTGTCTGAGACGTTGCTGAGCGC TGATTACAATAACGAGGGCAAGCATCCCGACGTACAAGTTTAACAGGAGC CACTTGGGGAACGGAGTCCTACAGGACCCCCAGCCAAAGAGAATCTCCTG GACTTTAACAGAAGACTGCGTTTTTGCATTACCTAGTTCAAACTAAGGCG GTTTTCGAGTTGTTTTATTTATTTATGCTCAAGGCAATGCCATTGAAACC AAACATTAAGCTAGCCTTAGCAGATACGGATTCAAATCACACTCGTTCCC TAAAACTGTATGAGGGTGTGTCATGCTTCACATCACACATTACTTCTAAG AATTCCTGAGATGTACATTTATAAATAAGTCAAAGCCTCGCTCAAAGACC GCTAGCTCGAAGACTCGATTGTTGGTCATAATGCTGCTCTATAATGTTGT TCAATTATTAGTTTGTAAGCGAATAAGCAAATAAATGAGCTCTAAAGTAC AAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 22717010..22717997 | 1..988 | 4940 | 100 | Plus |
chr3L | 24539361 | chr3L | 22721817..22722349 | 1268..1800 | 2650 | 99.8 | Plus |
chr3L | 24539361 | chr3L | 22721484..22721648 | 1112..1276 | 825 | 100 | Plus |
chr3L | 24539361 | chr3L | 22720918..22721043 | 986..1111 | 630 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 22728107..22729094 | 1..988 | 4940 | 100 | Plus |
3L | 28110227 | 3L | 22732914..22733448 | 1268..1802 | 2660 | 99.8 | Plus |
3L | 28110227 | 3L | 22732581..22732745 | 1112..1276 | 825 | 100 | Plus |
3L | 28110227 | 3L | 22732015..22732140 | 986..1111 | 630 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 22721207..22722194 | 1..988 | 4940 | 100 | Plus |
3L | 28103327 | 3L | 22726014..22726548 | 1268..1802 | 2660 | 99.8 | Plus |
3L | 28103327 | 3L | 22725681..22725845 | 1112..1276 | 825 | 100 | Plus |
3L | 28103327 | 3L | 22725115..22725240 | 986..1111 | 630 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 22717010..22717996 | 1..987 | 100 | -> | Plus |
chr3L | 22720920..22721043 | 988..1111 | 100 | -> | Plus |
chr3L | 22721484..22721645 | 1112..1273 | 100 | -> | Plus |
chr3L | 22721823..22722349 | 1274..1800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11367-RA | 1..1089 | 305..1393 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11367-RA | 1..1089 | 305..1393 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11367-RA | 1..1089 | 305..1393 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11367-RA | 1..1089 | 305..1393 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11367-RA | 1..1089 | 305..1393 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11367-RA | 1..1800 | 1..1800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11367-RA | 1..1800 | 1..1800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11367-RA | 1..1796 | 5..1800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11367-RA | 1..1800 | 1..1800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11367-RA | 1..1796 | 5..1800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22728107..22729093 | 1..987 | 100 | -> | Plus |
3L | 22732017..22732140 | 988..1111 | 100 | -> | Plus |
3L | 22732581..22732742 | 1112..1273 | 100 | -> | Plus |
3L | 22732920..22733446 | 1274..1800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22728107..22729093 | 1..987 | 100 | -> | Plus |
3L | 22732017..22732140 | 988..1111 | 100 | -> | Plus |
3L | 22732581..22732742 | 1112..1273 | 100 | -> | Plus |
3L | 22732920..22733446 | 1274..1800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22728107..22729093 | 1..987 | 100 | -> | Plus |
3L | 22732017..22732140 | 988..1111 | 100 | -> | Plus |
3L | 22732581..22732742 | 1112..1273 | 100 | -> | Plus |
3L | 22732920..22733446 | 1274..1800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 22721207..22722193 | 1..987 | 100 | -> | Plus |
arm_3L | 22725117..22725240 | 988..1111 | 100 | -> | Plus |
arm_3L | 22725681..22725842 | 1112..1273 | 100 | -> | Plus |
arm_3L | 22726020..22726546 | 1274..1800 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22721207..22722193 | 1..987 | 100 | -> | Plus |
3L | 22725117..22725240 | 988..1111 | 100 | -> | Plus |
3L | 22725681..22725842 | 1112..1273 | 100 | -> | Plus |
3L | 22726020..22726546 | 1274..1800 | 100 | Plus |
Translation from 304 to 1392
> LD47277.pep MSCNNNNNYKNKTTYGYSNNNDTNCIMQKPVPASTAPAFPQLIQASCSNA VEVDPPDSIVGAAGNSEALFAAQRTPDTSEDSECDPFLASRRATRSSATT SVLHNRKRNSCWGRAHSFLTRNWYLGCLVPATILGALVFIGWATRDYARQ LLFWIEMQNAWITFAVYMGLFALVSFPVVVGYFVLLITAGYLFGCLRGWV TVILGANIGIAVAHATIRSCRHRIPVQRLIKNDTGRAILRVISGPKAFRV VLFTRLTPIPFGVQNVIFGISSINTRDYHVATLIGLLPAQTINVYLGSTL RSMHEVLSDNDTKLTGYISFLFEVICGVALMFWVLQKARKELSETLLSAD YNNEGKHPDVQV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10994-PA | 344 | GF10994-PA | 38..344 | 45..362 | 1196 | 70 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16275-PA | 364 | GG16275-PA | 20..364 | 14..362 | 1659 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16763-PA | 384 | GH16763-PA | 31..384 | 28..362 | 1103 | 61.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11367-PA | 362 | CG11367-PA | 1..362 | 1..362 | 1895 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13424-PA | 361 | GI13424-PA | 30..361 | 35..362 | 1089 | 63.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18104-PA | 374 | GL18104-PA | 10..374 | 4..362 | 1278 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10948-PA | 374 | GA10948-PA | 10..374 | 4..362 | 1277 | 67.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22468-PA | 394 | GM22468-PA | 302..394 | 270..362 | 493 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15049-PA | 394 | GD15049-PA | 302..394 | 270..362 | 493 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11783-PA | 356 | GJ11783-PA | 30..356 | 33..362 | 1116 | 64.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20328-PA | 378 | GK20328-PA | 13..378 | 15..362 | 1153 | 60.9 | Plus |
Translation from 304 to 1392
> LD47277.hyp MSCNNNNNYKNKTTYGYSNNNDTNCIMQKPVPASTAPAFPQLIQASCSNA VEVDPPDSIVGAAGNSEALFAAQRTPDTSEDSECDPFLASRRATRSSATT SVLHNRKRNSCWGRAHSFLTRNWYLGCLVPATILGALVFIGWATRDYARQ LLFWIEMQNAWITFAVYMGLFALVSFPVVVGYFVLLITAGYLFGCLRGWV TVILGANIGIAVAHATIRSCRHRIPVQRLIKNDTGRAILRVISGPKAFRV VLFTRLTPIPFGVQNVIFGISSINTRDYHVATLIGLLPAQTINVYLGSTL RSMHEVLSDNDTKLTGYISFLFEVICGVALMFWVLQKARKELSETLLSAD YNNEGKHPDVQV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11367-PA | 362 | CG11367-PA | 1..362 | 1..362 | 1895 | 100 | Plus |