Clone LD47310 Report

Search the DGRC for LD47310

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:473
Well:10
Vector:pOT2
Associated Gene/TranscriptCG8611-RB
Protein status:LD47310.pep: gold
Sequenced Size:3612

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8611-RB 2010-11-11 Gleaning Pick By Joe Carlson

Clone Sequence Records

LD47310.complete Sequence

3612 bp assembled on 2011-02-07

GenBank Submission: BT125988.1

> LD47310.complete
AAAAGTTTCGCGATTCTTCTTTGGTTGCGAGCATCAATTGTGCCAAAATG
GTGGAAAATATATCACTGAATGTTACTGTAAAGTCGTCGGCTCGGAAAAA
TCAACAGCAGTCGCCCGCGCTTTCGGTTAAAAAACGTGCACAGAAATCCC
AGGATTTCGACTTTCAATTCAATGTGGACAAGCCCAAAGTCAAGGCAATC
GTTGTGCGAAGAAGGGCGCCTCCTTCGAAAGTTGAACCTACAAATTCATC
AGTTCCCAATACCACGAAATCGCCGACGCCTTCAGTTTCCTCCAGCAAAT
CCGCAATTTCCACTCTTTCAGCATCCCCCAAAGCAAATGCATCCAACGAT
GATCTTATGTTCAATGTTAGCCCAACGAAACCACCTGTTAAGAGCGTTTT
AGGCGACGATTTCATGCTAAATGTGACCACAAAGCCGGTGGTTGCCCAGA
AAGCCAAGCCAAAAATCACACGAGCCGAAAGATTGGGCAAGAAACAGAGG
CAGGGCAAGCCACTGACGAAGCTCAGCGAAGAGCAGATCACGCGGGCGCT
GAAGAGCAACAAAAAGCCAAAAAATCCAAATCAATTACCCACGCCCGGTG
ACCTTTTCCGCGCTCAACTGGAGGAGGAGAGGCGGCAAAAGCGTCGTGAA
GAGGGAGGAGGGGATCAGGAAGCCAGCGCCGATGAGGAGGATGCGAAGAA
CAACTCAGGAGGGGGATCTCCGAGGGTAAAACCGAGTTCAGCCGTTAAGG
AGTCCAAAAAGTCATCAGATATTGAGGATTCCGGCGAATCCGGCGAAGAA
TCTGCAACATCCGATGAGGAACCAGATGAATCCAGTGCACAATCTCCTGG
ACAAGAAAAGGAACCCAAACAAACCGCGAAGAAACCACCGAAAGCCGAGG
AAACCTCGTCCACAAACCGTTTTCGCACCAAGAAGATCGGCCTCTTCGAC
CAAAGCGACGTGGAGGCACTCAAGCAACTGGGCCAAAGAGCGGTGAAGCC
CGTCAAGGAGACCATCTTTACAGGCTCTAAAATATCCACGTTGGGACTGC
ATCCTCATGCTGTAAAGAACTTGGAGGATCTGCTTAGCATTCGAGAGCTA
ACTAGCGTGCAGCAGAAGACCATTCCCGAAGTTCTCCAGGGCAAGGATGT
GCTCGTACGTTCGCAGACGGGCTCGGGAAAGACCCTGGCATATGCTCTAC
CCTTGGTGGAACTGTTGCAGAAACAGCAGCCACGGATACAGCGAAAGGAT
GGCGTGCTGGCCCTGGTGATTGTACCCACCAGGGAGCTGGTGATGCAGAC
ATACGAACTCATCCAGAAGCTGGTCAAGCCGTACACATGGATAGTGCCCG
GTTCTTTGCTGGGTGGCGAGAGCAGGAAAAGCGAAAAGGCCAGGCTAAGA
AAGGGCATCAACATACTGATAGGCACACCTGGTCGTCTGGTGGATCACCT
GCTGCACACGGCCTCCTTCAAGCTGACCAAACTGCAGTTCCTCATACTGG
ACGAAGCAGATCGCCTGCTGGAGCTGGGCTACGAACGCGATGTCAAGCAG
TTGGTGGAGGCCATTGACAAGCAGCGTGCGGAGTGCGAGGACAAGGAGCT
TCCCCAGCTGCAAAGGATGCTGCTGAGTGCCACTTTGACTTCGCAGGTCC
AACAGCTGGCCGGTTTGACCCTCAAGAATCCCCTGTACATAGACAACAGC
GACGAGGCGGCGAGTGCGGCGCTGAAGAGCAAGGATGGCTACCAAAAGGA
GACCATAGAAGCCTTGCTAGAGGTGGACGACGGACTGGGCGAGTACCAGG
AGGATGTGACGGGTGTGCTGAGTATTCCCGAGAACCTGCAGCTCAGCTAT
GTGGTGGTGCCGCCAAAACTACGTCTGGTGGCACTGTCTTCGCTGCTGGC
CAAGGAAGTGGACGCCAGTCCCAAGCAGTTCAAGGCGATTGTGTTCATGA
GCACCACGGAGATGGTGAACTTCCATCACGACATGCTCAACGAGGCGTTG
ACCAGGCGAGTTCTCGACGAGGAGGACGAGCAGGAGAAAGGTGATTCGGA
TGACGACGGCGACATACCTTTACTGCAGGGTCTGCGCTTCTTCAAACTAC
ATGGCTCCATGACGCAGACGGAACGGCAGGGCGTTTTTCGTGGCTTCCGC
GATTGCGCCAGCTGCGTCCTGCTGGCCACCGATGTGGTGGGTCGTGGCAT
CGATGTTCCCGACATAAAACTGGTGGTGCAGTACACGCCGCCGCAAACCA
CCGCCGATTTTGTTCACCGCGTGGGTCGAACGGCTCGAGCGGGCCGAAAG
GGCAGAGCCGTGCTCTTCCTGACGCCCAGCGAGGCCCAGTTCGTGCGGCA
TCTGGAGAAGAAGCGCATCCGCATCCAGCAGGGCGACATGTACGCCTACC
TGCAGACCCTGCTGCCCAAGGACGATGAGGCCAGGACGGTGCAGGAGGCG
GCCTCCAATCTGCAGCACAAGTTCCAGACGCTGCTCGAGGATGATCGCGA
ACTACACGACAAGTCCTGCAAAGCCTTTGTGTCCTGGATGAAGTTCTACT
CGACGTTTCCCAAGGAGCTGAAGCCCATCTTCAACGTGCGCATCGCCCAC
ATGGGCCACTTCGCCAAGAGCTTTGCGCTCAAGGAGGCGCCCTCAAAGTT
CGCCGCCAAGCACGCCGCCCCCAAGGCGGCCCCGCCCACCAACCGACTGA
CCTACACGGAGAGAGATCCCGAGAAGATCCAGGCCCAGAAGCGGGCCAAG
CGGCGATTCACGACGACGGTCAGCGGGGAGGTGCGACAGCTGCAGCAGCG
GGACGTAGGAGCGCAGAAGCCAGGAGCCCCACCACCCAAGGGTGGTTTCA
TTGGCGGCGGAGTGGGACGCAGCAGCTTCATGAAGAGCCTGGGCAAATCG
AGGGCGCTGAATATGTCCGAGTTCGACAGCGGACTGCCACCGGAGGGAGC
CGCCAAGCGACGCAAGCAGGCGTAGGAAAAGCAAAAGGACGTCGAGCACT
TGGAGGACTCGCTGGACTTGGAGGGGAAGGTGGACGAGCAGGCGGAGGAG
GGGCAGTGCGGTCCGGATGGAGTTCTGAGCACTTTGCGGCACTTTATGCG
CGCCATTTTGCCTGTCCGCTGTGCCTGCTCAAGCATTTAATCGAAAAGAA
AATTGCTCCATATATATTATATATATGTATAGTCGAGTAAAAATCTAAGA
AATCCCAAGGAGATGCGCTCATAAAAGTTTCATTTTTCTCAACTTTTAAG
CCCGGACGTCCTGCGGGAAAAGTTGTGGCCGCCTGCCAGCATATTTTAAG
CTTCCTTTCCATTTTTTTCCCACATTTACTTTTTTTTTTACTTTTTGTTT
TTTGATTACTCGCCGTAATATGTTCGTTCATTTTTTGTGTGGAAAATATT
AGAAATCCATTTTCCGCTCACTGCAGATTCATTCAGTTTTGAAAATGTCA
CCAACGACGGCGGGGGGTCAGAGGTCGGCACGTGTTGGCTTTTTATGCAA
CTGAAGCGCATAATTCGTTGGACAAGGCATAAATAAATATCGGATACATA
TAAACACTGTAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

LD47310.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:37:39
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 17309316..17311306 2095..105 9880 99.7 Minus
chrX 22417052 chrX 17303187..17304041 3565..2712 4210 99.8 Minus
chrX 22417052 chrX 17308830..17309255 2521..2096 2100 99.5 Minus
chrX 22417052 chrX 17304367..17304558 2713..2522 960 100 Minus
chrX 22417052 chrX 17311363..17311469 107..1 535 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:37:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17419936..17421926 2095..105 9955 100 Minus
X 23542271 X 17413790..17414644 3565..2712 4210 99.8 Minus
X 23542271 X 17419448..17419875 2523..2096 2140 100 Minus
X 23542271 X 17414970..17415161 2713..2522 960 100 Minus
X 23542271 X 17421983..17422089 107..1 535 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:06:26
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 17428034..17430024 2095..105 9955 100 Minus
X 23527363 X 17421888..17422742 3565..2712 4220 99.7 Minus
X 23527363 X 17427546..17427973 2523..2096 2140 100 Minus
X 23527363 X 17423068..17423259 2713..2522 960 100 Minus
X 23527363 X 17430081..17430187 107..1 535 100 Minus
Blast to na_te.dros performed on 2019-03-17 01:37:38 has no hits.

LD47310.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:38:37 Download gff for LD47310.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 17303192..17304039 2714..3560 99 <- Minus
chrX 17304367..17304556 2524..2713 100 <- Minus
chrX 17308828..17309255 2096..2523 99 <- Minus
chrX 17309316..17311303 108..2095 99 <- Minus
chrX 17311363..17311469 1..107 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-02-10 13:37:38 Download gff for LD47310.complete
Subject Subject Range Query Range Percent Splice Strand
CG8611-RB 1..2928 48..2975 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:45:50 Download gff for LD47310.complete
Subject Subject Range Query Range Percent Splice Strand
CG8611-RB 1..2928 48..2975 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 18:04:32 Download gff for LD47310.complete
Subject Subject Range Query Range Percent Splice Strand
CG8611-RB 1..2928 48..2975 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-10 13:37:38 Download gff for LD47310.complete
Subject Subject Range Query Range Percent Splice Strand
CG8611-RB 67..3625 1..3558 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:45:50 Download gff for LD47310.complete
Subject Subject Range Query Range Percent Splice Strand
CG8611-RB 57..3617 1..3560 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 18:04:32 Download gff for LD47310.complete
Subject Subject Range Query Range Percent Splice Strand
CG8611-RB 57..3617 1..3560 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:38:37 Download gff for LD47310.complete
Subject Subject Range Query Range Percent Splice Strand
X 17413795..17414642 2714..3560 99 <- Minus
X 17414970..17415159 2524..2713 100 <- Minus
X 17419448..17419875 2096..2523 100 <- Minus
X 17419936..17421923 108..2095 100 <- Minus
X 17421983..17422089 1..107 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:38:37 Download gff for LD47310.complete
Subject Subject Range Query Range Percent Splice Strand
X 17413795..17414642 2714..3560 99 <- Minus
X 17414970..17415159 2524..2713 100 <- Minus
X 17419448..17419875 2096..2523 100 <- Minus
X 17419936..17421923 108..2095 100 <- Minus
X 17421983..17422089 1..107 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:38:37 Download gff for LD47310.complete
Subject Subject Range Query Range Percent Splice Strand
X 17413795..17414642 2714..3560 99 <- Minus
X 17414970..17415159 2524..2713 100 <- Minus
X 17419448..17419875 2096..2523 100 <- Minus
X 17419936..17421923 108..2095 100 <- Minus
X 17421983..17422089 1..107 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:45:50 Download gff for LD47310.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17307828..17308675 2714..3560 99 <- Minus
arm_X 17309003..17309192 2524..2713 100 <- Minus
arm_X 17313481..17313908 2096..2523 100 <- Minus
arm_X 17313969..17315956 108..2095 100 <- Minus
arm_X 17316016..17316122 1..107 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:57:16 Download gff for LD47310.complete
Subject Subject Range Query Range Percent Splice Strand
X 17421893..17422740 2714..3560 99 <- Minus
X 17423068..17423257 2524..2713 100 <- Minus
X 17427546..17427973 2096..2523 100 <- Minus
X 17428034..17430021 108..2095 100 <- Minus
X 17430081..17430187 1..107 100   Minus

LD47310.pep Sequence

Translation from 2 to 2974

> LD47310.pep
KFRDSSLVASINCAKMVENISLNVTVKSSARKNQQQSPALSVKKRAQKSQ
DFDFQFNVDKPKVKAIVVRRRAPPSKVEPTNSSVPNTTKSPTPSVSSSKS
AISTLSASPKANASNDDLMFNVSPTKPPVKSVLGDDFMLNVTTKPVVAQK
AKPKITRAERLGKKQRQGKPLTKLSEEQITRALKSNKKPKNPNQLPTPGD
LFRAQLEEERRQKRREEGGGDQEASADEEDAKNNSGGGSPRVKPSSAVKE
SKKSSDIEDSGESGEESATSDEEPDESSAQSPGQEKEPKQTAKKPPKAEE
TSSTNRFRTKKIGLFDQSDVEALKQLGQRAVKPVKETIFTGSKISTLGLH
PHAVKNLEDLLSIRELTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALP
LVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKLVKPYTWIVPG
SLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTASFKLTKLQFLILD
EADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQ
QLAGLTLKNPLYIDNSDEAASAALKSKDGYQKETIEALLEVDDGLGEYQE
DVTGVLSIPENLQLSYVVVPPKLRLVALSSLLAKEVDASPKQFKAIVFMS
TTEMVNFHHDMLNEALTRRVLDEEDEQEKGDSDDDGDIPLLQGLRFFKLH
GSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYTPPQTT
ADFVHRVGRTARAGRKGRAVLFLTPSEAQFVRHLEKKRIRIQQGDMYAYL
QTLLPKDDEARTVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYS
TFPKELKPIFNVRIAHMGHFAKSFALKEAPSKFAAKHAAPKAAPPTNRLT
YTERDPEKIQAQKRAKRRFTTTVSGEVRQLQQRDVGAQKPGAPPPKGGFI
GGGVGRSSFMKSLGKSRALNMSEFDSGLPPEGAAKRRKQA*

LD47310.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:39:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22616-PA 921 GF22616-PA 1..921 16..990 3451 74.5 Plus
Dana\GF18065-PA 678 GF18065-PA 203..625 361..880 660 31.4 Plus
Dana\GF19542-PA 841 GF19542-PA 96..529 367..880 558 30.2 Plus
Dana\GF16207-PA 607 GF16207-PA 25..504 361..913 535 29.9 Plus
Dana\GF10884-PA 822 GF10884-PA 175..508 367..779 480 31 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:39:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18185-PA 978 GG18185-PA 1..978 16..990 4376 90.4 Plus
Dere\GG11103-PA 683 GG11103-PA 208..630 361..880 667 31.4 Plus
Dere\GG19124-PA 827 GG19124-PA 96..529 367..880 559 30.7 Plus
Dere\GG17465-PA 613 GG17465-PA 25..508 361..913 527 30.2 Plus
Dere\GG15018-PA 824 GG15018-PA 181..514 367..779 478 31 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:39:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24071-PA 925 GH24071-PA 1..925 16..990 2941 62.2 Plus
Dgri\GH20986-PA 689 GH20986-PA 215..637 361..880 656 31 Plus
Dgri\GH24149-PA 798 GH24149-PA 87..514 367..880 528 28.6 Plus
Dgri\GH14140-PA 621 GH14140-PA 30..511 366..914 482 29.4 Plus
Dgri\GH22580-PA 793 GH22580-PA 170..502 367..778 474 30.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:32:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG8611-PB 975 CG8611-PB 1..975 16..990 4913 100 Plus
CG8611-PA 974 CG8611-PA 1..974 16..990 4896 99.9 Plus
CG8611-PC 828 CG8611-PC 1..825 16..840 4135 100 Plus
pit-PC 680 CG6375-PC 11..645 154..899 689 27.4 Plus
pit-PA 680 CG6375-PA 11..645 154..899 689 27.4 Plus
pit-PB 680 CG6375-PB 11..645 154..899 689 27.4 Plus
CG5800-PA 826 CG5800-PA 37..529 285..880 537 29 Plus
CG9630-PA 613 CG9630-PA 17..508 353..913 523 29.4 Plus
CG9253-PA 507 CG9253-PA 77..453 359..830 451 28.8 Plus
mahe-PC 945 CG10777-PC 261..606 367..784 446 30.1 Plus
mahe-PB 945 CG10777-PB 261..606 367..784 446 30.1 Plus
CG10077-PD 818 CG10077-PD 181..513 367..778 439 30.6 Plus
CG10077-PA 818 CG10077-PA 181..513 367..778 439 30.6 Plus
Rm62-PH 575 CG10279-PH 161..501 367..784 431 30 Plus
Rm62-PD 575 CG10279-PD 161..501 367..784 431 30 Plus
Rm62-PI 578 CG10279-PI 164..504 367..784 431 30 Plus
Rm62-PF 578 CG10279-PF 164..504 367..784 431 30 Plus
Rm62-PE 578 CG10279-PE 164..504 367..784 431 30 Plus
Rm62-PB 578 CG10279-PB 164..504 367..784 431 30 Plus
Rm62-PC 578 CG10279-PC 164..504 367..784 431 30 Plus
Rm62-PA 719 CG10279-PA 305..645 367..784 431 30 Plus
CG6418-PB 791 CG6418-PB 121..629 185..784 403 25 Plus
CG10333-PA 822 CG10333-PA 312..783 248..786 397 27.1 Plus
CG32344-PA 827 CG32344-PA 63..381 367..769 382 29 Plus
Gem3-PB 1028 CG6539-PB 21..391 351..787 370 27.7 Plus
Gem3-PA 1028 CG6539-PA 21..391 351..787 370 27.7 Plus
Dbp73D-PA 687 CG9680-PA 37..556 247..777 357 27 Plus
vas-PC 661 CG46283-PC 269..597 367..777 355 27.9 Plus
vas-PB 661 CG46283-PB 269..597 367..777 355 27.9 Plus
vas-PA 661 CG46283-PA 269..597 367..777 355 27.9 Plus
CG9143-PA 813 CG9143-PA 63..680 171..804 343 23.5 Plus
Rs1-PB 782 CG2173-PB 181..372 367..570 332 38.3 Plus
Rs1-PA 782 CG2173-PA 181..372 367..570 332 38.3 Plus
CG10077-PC 472 CG10077-PC 181..468 367..733 331 28.9 Plus
Rm62-PK 485 CG10279-PK 161..451 367..734 328 28.9 Plus
Hlc-PB 560 CG1666-PB 27..401 361..787 327 26.7 Plus
Hlc-PA 560 CG1666-PA 27..401 361..787 327 26.7 Plus
Rm62-PL 473 CG10279-PL 161..451 367..734 324 28.6 Plus
Rm62-PM 478 CG10279-PM 161..451 367..734 324 28.6 Plus
Rm62-PJ 458 CG10279-PJ 161..450 367..733 322 28.7 Plus
me31B-PB 428 CG4916-PB 53..382 369..787 319 26.4 Plus
me31B-PA 459 CG4916-PA 84..413 369..787 319 26.4 Plus
CG6227-PA 1224 CG6227-PA 240..719 90..563 314 25.6 Plus
bel-PA 798 CG9748-PA 173..515 218..563 289 25.4 Plus
bel-PB 801 CG9748-PB 173..515 218..563 289 25.4 Plus
Dbp21E2-PA 536 CG3561-PA 115..468 349..771 275 25 Plus
abs-PA 619 CG14637-PA 93..422 248..592 269 27.4 Plus
Hel25E-PB 424 CG7269-PB 65..389 367..774 267 24.3 Plus
Hel25E-PA 424 CG7269-PA 65..389 367..774 267 24.3 Plus
Hel25E-PC 424 CG7269-PC 65..389 367..774 267 24.3 Plus
Dbp45A-PA 521 CG12759-PA 12..197 347..551 251 33.5 Plus
Rs1-PB 782 CG2173-PB 425..520 691..786 194 41.7 Plus
Rs1-PA 782 CG2173-PA 425..520 691..786 194 41.7 Plus
Dbp45A-PA 521 CG12759-PA 281..370 699..787 191 41.1 Plus
CG6227-PA 1224 CG6227-PA 765..906 681..822 187 33.1 Plus
abs-PA 619 CG14637-PA 436..567 677..808 174 31.6 Plus
bel-PA 798 CG9748-PA 589..683 699..793 163 35.8 Plus
bel-PB 801 CG9748-PB 589..683 699..793 163 35.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:39:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14650-PA 893 GI14650-PA 212..893 301..990 2929 83.3 Plus
Dmoj\GI10456-PA 748 GI10456-PA 272..690 361..876 680 31.5 Plus
Dmoj\GI21709-PA 804 GI21709-PA 91..519 367..880 562 30.8 Plus
Dmoj\GI10673-PA 610 GI10673-PA 30..525 366..933 515 29.7 Plus
Dmoj\GI12369-PA 794 GI12369-PA 167..500 367..779 478 30.5 Plus
Dmoj\GI14650-PA 893 GI14650-PA 1..194 16..217 231 37.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:39:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19832-PA 917 GL19832-PA 1..917 16..990 3361 69.7 Plus
Dper\GL24012-PA 884 GL24012-PA 241..562 361..762 586 33.5 Plus
Dper\GL15986-PA 838 GL15986-PA 88..527 367..880 552 30.4 Plus
Dper\GL24181-PA 609 GL24181-PA 25..505 361..913 528 30.1 Plus
Dper\GL15249-PA 688 GL15249-PA 10..355 367..784 474 31 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:39:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27288-PA 917 GA27288-PA 1..917 16..990 3372 69.6 Plus
Dpse\GA26479-PA 716 GA26479-PA 241..663 361..880 665 31.4 Plus
Dpse\GA19139-PA 838 GA19139-PA 88..527 367..880 552 30.4 Plus
Dpse\GA21925-PA 609 GA21925-PA 25..505 361..913 528 30.1 Plus
Dpse\GA10556-PA 939 GA10556-PA 234..607 351..784 483 30.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:39:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13317-PA 972 GM13317-PA 1..972 16..990 4687 94.1 Plus
Dsec\GM26397-PA 680 GM26397-PA 205..627 361..880 667 31.4 Plus
Dsec\GM13518-PA 825 GM13518-PA 37..529 285..880 561 29.2 Plus
Dsec\GM26359-PA 613 GM26359-PA 25..508 361..913 531 30 Plus
Dsec\GM23393-PA 519 GM23393-PA 70..457 347..830 472 29 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:39:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17360-PA 841 GD17360-PA 265..841 414..990 3036 97.4 Plus
Dsim\GD17360-PA 841 GD17360-PA 1..264 16..282 1080 86.1 Plus
Dsim\pit-PA 918 GD20918-PA 205..555 361..790 612 33.3 Plus
Dsim\GD15676-PA 825 GD15676-PA 37..529 285..880 554 29 Plus
Dsim\GD20881-PA 613 GD20881-PA 25..508 361..913 527 29.8 Plus
Dsim\GD24302-PA 519 GD24302-PA 70..457 347..830 470 28.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:39:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19298-PA 957 GJ19298-PA 71..957 40..990 3074 68.5 Plus
Dvir\GJ23143-PA 670 GJ23143-PA 196..618 361..880 673 31.2 Plus
Dvir\GJ15570-PA 806 GJ15570-PA 90..529 367..880 551 30.1 Plus
Dvir\GJ15571-PA 531 GJ15571-PA 90..529 367..880 543 30.1 Plus
Dvir\GJ23025-PA 610 GJ23025-PA 30..522 366..932 515 30.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:39:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19923-PA 917 GK19923-PA 1..917 16..989 3265 67.9 Plus
Dwil\GK14240-PA 663 GK14240-PA 190..630 361..899 668 31.2 Plus
Dwil\GK16405-PA 846 GK16405-PA 97..532 367..880 536 30.2 Plus
Dwil\GK11359-PA 613 GK11359-PA 30..525 366..926 518 29.6 Plus
Dwil\GK21047-PA 507 GK21047-PA 60..450 347..833 474 28.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:39:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15594-PA 970 GE15594-PA 1..970 16..990 4157 89.7 Plus
Dyak\GE10265-PA 681 GE10265-PA 206..628 361..880 667 31.4 Plus
Dyak\GE17675-PA 823 GE17675-PA 96..529 367..880 563 31.1 Plus
Dyak\GE24865-PA 615 GE24865-PA 25..510 361..913 532 29.9 Plus
Dyak\GE12898-PA 522 GE12898-PA 84..423 359..785 478 30.4 Plus

LD47310.hyp Sequence

Translation from 2 to 2974

> LD47310.hyp
KFRDSSLVASINCAKMVENISLNVTVKSSARKNQQQSPALSVKKRAQKSQ
DFDFQFNVDKPKVKAIVVRRRAPPSKVEPTNSSVPNTTKSPTPSVSSSKS
AISTLSASPKANASNDDLMFNVSPTKPPVKSVLGDDFMLNVTTKPVVAQK
AKPKITRAERLGKKQRQGKPLTKLSEEQITRALKSNKKPKNPNQLPTPGD
LFRAQLEEERRQKRREEGGGDQEASADEEDAKNNSGGGSPRVKPSSAVKE
SKKSSDIEDSGESGEESATSDEEPDESSAQSPGQEKEPKQTAKKPPKAEE
TSSTNRFRTKKIGLFDQSDVEALKQLGQRAVKPVKETIFTGSKISTLGLH
PHAVKNLEDLLSIRELTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALP
LVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKLVKPYTWIVPG
SLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTASFKLTKLQFLILD
EADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQ
QLAGLTLKNPLYIDNSDEAASAALKSKDGYQKETIEALLEVDDGLGEYQE
DVTGVLSIPENLQLSYVVVPPKLRLVALSSLLAKEVDASPKQFKAIVFMS
TTEMVNFHHDMLNEALTRRVLDEEDEQEKGDSDDDGDIPLLQGLRFFKLH
GSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYTPPQTT
ADFVHRVGRTARAGRKGRAVLFLTPSEAQFVRHLEKKRIRIQQGDMYAYL
QTLLPKDDEARTVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYS
TFPKELKPIFNVRIAHMGHFAKSFALKEAPSKFAAKHAAPKAAPPTNRLT
YTERDPEKIQAQKRAKRRFTTTVSGEVRQLQQRDVGAQKPGAPPPKGGFI
GGGVGRSSFMKSLGKSRALNMSEFDSGLPPEGAAKRRKQA*

LD47310.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:28:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG8611-PB 975 CG8611-PB 1..975 16..990 4913 100 Plus
CG8611-PA 974 CG8611-PA 1..974 16..990 4896 99.9 Plus
CG8611-PC 828 CG8611-PC 1..825 16..840 4135 100 Plus
pit-PC 680 CG6375-PC 11..645 154..899 689 27.4 Plus
pit-PA 680 CG6375-PA 11..645 154..899 689 27.4 Plus