BDGP Sequence Production Resources |
Search the DGRC for LD47312
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 473 |
Well: | 12 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9705-RA |
Protein status: | LD47312.pep: gold |
Preliminary Size: | 1716 |
Sequenced Size: | 1559 |
Gene | Date | Evidence |
---|---|---|
CG9705 | 2001-01-01 | Release 2 assignment |
CG9705 | 2001-09-19 | Blastp of sequenced clone |
CG9705 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9705 | 2008-04-29 | Release 5.5 accounting |
CG9705 | 2008-08-15 | Release 5.9 accounting |
CG9705 | 2008-12-18 | 5.12 accounting |
1559 bp (1559 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060441
> LD47312.complete CTTTGACGCCTCCGCCGCCATTCGTTAAAAAACTGAAATTCTTAAAAAGC GCGCATCAAGCCGGTGTAATAATTGATAAAAAAGTTTAAAAAAATCCCAG ATTCCAAAGTTGATAAAAGTCATACCGCGCAGGACTGATTTAGGGGGTAC AAATAACATTGGCAACCGGCGTTTCGCACAGCGGTAAAATTTGCATCAGT GTGTGGGTGTTTCGCAAAAAAAAAAGAAGCTAAGCCAGGATTTTTGGATT GCCAATTATCAAGGTGCTAGGAAAGAGGGCGTGAAGTTGTCGGTAAGCTG ACCGAGTACACGTGAATTAAGTGCAACGCAATTTGCTGACTGACTAACCC GCCCCCCGTGGCCTTGAACTCGACAGACTTGGCTGCCGTCCACTCACCCA CAAACACACATACGCACATATATACACACGCGCAAGCCGCTTCTACTGTC TGAAGAGAGGAGAGGAAAAGAGCGAAGAAAGGGGAAGAACGCATAAATCG GCAAGTAAACGAGCAGTGTAAGAAAGCCATGACCGAACCAAGGACGCCCG AGAAGCTGCTGGCCGCCAAGCCGCCGGTTTTACACCACAACAGCCATAGT CCCAATGCCTCGCTGCAGCTGCCCAGTCCCATCATCACGAGGCGCACTCG CACGGCCTCGACCTCCGCTCGGGCCTTGGAAAATCCGGTTGTGACCGGTA TGGTGAAATCCTTCAGCCGCACCAAAGGACACGGCTTCATTACACCCAAC GCCGGCGGAGAGGACGTTTTTTGCCACGTTTCCGACATCGAAGGTGAATA TGTGCCCATGCCCGGGGACGAGGTCAAATACCGTCTGTGCGCCATTCCGC CCAAGTATGAGAAGCACCAGGCCGTGCACGTGCAGATTAGCCACCTGACG CCGGAGGTGCACCACAAGTGGGAGGAGCCATTCTATGGTGGCTCCTCGCC CGCTAAGTAAAGCTGAAGCTTGTGGCCCTGGGAGATTTCGAAGCTCGGAA GCGGAAAAGTGTGTTGTTAAAAGCTGAACGGCCTTCCAAGAAATTTAATT GAGCTAGAGCACGCCACCCGAGATGAACGAAACGGAAAACCGGAACAGAA CAATAACCATGAAAGTAAACGAAAGCACAGCAATCGAAGCAGCCAGGAAA AAGCCGAAACCAGACCAGAACGTAATAGAATGGAACAACAGGCCTGCCAT CCAGCCAGCCAGCGAGCAGCATCACAAGAGTTTCAATTGAACACTTAATT AGAATTTAAGCTAAGCTATGGAAGTCAAACAAAACGCAGTCACAAATATT GCCTTTCCCTCTGGAAGAGGGGAGAGCAACCGCAACCAGTTTCGAGTATA TTATTAAAAGCGCGTATGTATTTGGAAATTGAAATTGTTATTCGAGAAGC CACTAGCACAGCGCCTGCGATGCTGTGGTGCCCTGTATCAGTAATTACTT TTAATTATAACAAAACATCTGAATGTGTTCGCGAAGCAAACAAGCAAAAT GCTCTCAGTAATTCACTTTATTATTAAAACAGCTGCAAAACAAAAAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 16771239..16771995 | 786..1541 | 3675 | 99.3 | Plus |
chr3L | 24539361 | chr3L | 16769716..16770376 | 1..662 | 3170 | 98.9 | Plus |
chr3L | 24539361 | chr3L | 16771038..16771160 | 663..785 | 600 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 16781664..16782421 | 786..1543 | 3790 | 100 | Plus |
3L | 28110227 | 3L | 16780129..16780790 | 1..662 | 3310 | 100 | Plus |
3L | 28110227 | 3L | 16781463..16781585 | 663..785 | 615 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 16774764..16775521 | 786..1543 | 3790 | 100 | Plus |
3L | 28103327 | 3L | 16773229..16773890 | 1..662 | 3310 | 100 | Plus |
3L | 28103327 | 3L | 16774563..16774685 | 663..785 | 615 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16769716..16770376 | 1..662 | 92 | -> | Plus |
chr3L | 16771038..16771160 | 663..785 | 99 | -> | Plus |
chr3L | 16771239..16771995 | 786..1541 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9705-RA | 1..432 | 529..960 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9705-RA | 1..432 | 529..960 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9705-RB | 1..432 | 529..960 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9705-RA | 1..432 | 529..960 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9705-RB | 1..432 | 529..960 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9705-RA | 19..1559 | 1..1541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9705-RA | 29..1569 | 1..1541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9705-RA | 30..1570 | 1..1541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9705-RA | 19..1559 | 1..1541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9705-RA | 30..1570 | 1..1541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16780129..16780790 | 1..662 | 100 | -> | Plus |
3L | 16781463..16781585 | 663..785 | 100 | -> | Plus |
3L | 16781664..16782419 | 786..1541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16780129..16780790 | 1..662 | 100 | -> | Plus |
3L | 16781463..16781585 | 663..785 | 100 | -> | Plus |
3L | 16781664..16782419 | 786..1541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16780129..16780790 | 1..662 | 100 | -> | Plus |
3L | 16781463..16781585 | 663..785 | 100 | -> | Plus |
3L | 16781664..16782419 | 786..1541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16773229..16773890 | 1..662 | 100 | -> | Plus |
arm_3L | 16774563..16774685 | 663..785 | 100 | -> | Plus |
arm_3L | 16774764..16775519 | 786..1541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16774563..16774685 | 663..785 | 100 | -> | Plus |
3L | 16773229..16773890 | 1..662 | 100 | -> | Plus |
3L | 16774764..16775519 | 786..1541 | 100 | Plus |
Translation from 528 to 959
> LD47312.pep MTEPRTPEKLLAAKPPVLHHNSHSPNASLQLPSPIITRRTRTASTSARAL ENPVVTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDIEGEYVPMPGDEVK YRLCAIPPKYEKHQAVHVQISHLTPEVHHKWEEPFYGGSSPAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23931-PA | 142 | GF23931-PA | 1..142 | 1..143 | 696 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13577-PA | 143 | GG13577-PA | 1..143 | 1..143 | 728 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16224-PA | 142 | GH16224-PA | 1..142 | 1..143 | 650 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9705-PC | 143 | CG9705-PC | 1..143 | 1..143 | 772 | 100 | Plus |
CG9705-PA | 143 | CG9705-PA | 1..143 | 1..143 | 772 | 100 | Plus |
CG9705-PB | 143 | CG9705-PB | 1..143 | 1..143 | 772 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13370-PA | 142 | GI13370-PA | 1..142 | 1..143 | 646 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20690-PA | 142 | GL20690-PA | 1..142 | 1..143 | 669 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21978-PA | 142 | GA21978-PA | 1..142 | 1..143 | 669 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25657-PA | 143 | GM25657-PA | 1..143 | 1..143 | 752 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14664-PA | 143 | GD14664-PA | 1..143 | 1..143 | 752 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13199-PA | 142 | GJ13199-PA | 1..142 | 1..143 | 654 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16809-PA | 143 | GK16809-PA | 1..143 | 1..143 | 680 | 91 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19874-PA | 143 | GE19874-PA | 1..143 | 1..143 | 732 | 96.5 | Plus |
Translation from 528 to 959
> LD47312.hyp MTEPRTPEKLLAAKPPVLHHNSHSPNASLQLPSPIITRRTRTASTSARAL ENPVVTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDIEGEYVPMPGDEVK YRLCAIPPKYEKHQAVHVQISHLTPEVHHKWEEPFYGGSSPAK*