![]() | BDGP Sequence Production Resources |
Search the DGRC for LD47334
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 473 |
Well: | 34 |
Vector: | pOT2 |
Associated Gene/Transcript | CG2685-RA |
Protein status: | LD47334.pep: gold |
Sequenced Size: | 1938 |
Gene | Date | Evidence |
---|---|---|
CG2685 | 2010-06-28 | Manual selection by Sue Celniker |
1938 bp assembled on 2011-02-17
GenBank Submission: BT126048.1
> LD47334.complete CCTGCGCGTGTATCGGCCTATCGAGCTGCAAACGAATAAATAAATAAAAA TATAAATAAATCAATTGAAAGTGATATTATAAAAGCAAATTAGGACGTTG GGCAGGAAAAAAACGCCGGTAACAATATTGCAGCGCCGGCGTTTAGGTGA AGTCATTCGTTTAGTTGCAGCAACAAGAAATAGCCAGCAAGATGGGACGC CGCTCCATAAACACCACGAAGAGTGGAAAGTACATGAATCCCACGGACCA GGCGCGCAAGGAGGCCCGCAAGAAGGAGCTCAAGAAGAACAAGAAACAGC GCCAAATGGTGCGGGCCGCCGTTTTGAAGAACAAGGATCCTTCACAGATA CTTGAGGAGATGGAGAAGATCGACGAGATGGAGTACAACGTTCTGCAACC ATCGCCGCTGAACGAGAAGGTGCTGCGCGACAAGCGCAAAAAGCTGAAGG AAACATTCGACCGCGTAATGCGACTCTATCACAATGACGAGCCGGAGCAC TGGGCGGACCTCAAGCGCAAGGAGGTGGAGTATGAGAAGAAGCGCCTGAA GAAGCAGCAGTACTACGAAAGCGTTAAGCACGCCCAGAGCGTCCAGATTG ACGAAATTCCACTGCCCGCTCCGGTGTCTGCCGTGTCAGGCGGTTCTACC GAAACGACTGGCGGATCGGTGGTTGCGGGATTCGGCGCATCCGTTGTCAT ACGCCTTCCCCCACCGCCCATGACAATGGCACTGCCGCCTTATGCTCCAG GCGCTCCACCAGGCGTGTCCAGAAATAGCGATTTAGCCAGCGAGGCGCAA GTGGAGAAATCGAAGGAGAACGAGCAAAAGGATTGGCTGGGTGTCCCGCC GGGACCGCCGCCAGATCTGTTTGCCTTTTCCGAACTCAATTCCGATGCCG AGGGAAATACTGACTACGATGGTGAGGGCGAGGAGGAGGAGCCAGAGCCA TTGAAGAAGGGCAAGGATAAAGAGAAGGACAAGAACAGCGAGGCCACCGA GCCAAATAACCAAAATATCGACGACTTCATGAAGGAAATGGAGCATGTGC ACAAGCGTAAGCATCGAAAACTGGCGGCTAAAGAGGACGAGGCCGACAAA AAGCGGGAGGAGGACGATGGGAAAGATATAGATAAGATAGAGGAACGAAC ATCTGACTCCGATAAGAGAACCGCCAGCAGTACGGACGATGAGGACGACG ATGACCAGGATGAGGATGAAAATATGCCCGAAGTGCCGACCAAGCCAGCA TCAGTCAAATCATCTACAGCGACACCCGCGCCAGCTCCTCCGACAGCGCC CACATTGCCGACTATTCCGCTGCCACCAGCGTCGTCTGTGCCTGCGCCGC CACAGCTGCCACACCTACCGCCAATTCCTAATCTTGGGCCACCTGGCATA ATGTACCGACCTCCACCCATGCGACCTCCTCACCCGGGTTCCGGCTTTGG CATACGCATGCCACCTGGACCGCCGCCAGGACCCAGGGCACCGCATGGCC TGGGACCAATACCGCGCATGGGCATCAGGATGCCACCAGGACCGCCGCCA GGTCTGCCTCCGCGCCTTGCGCACCACAATAAGCAGGGAGGCGGCGCAGG TGCACCAAAGGAGTCAGCCAAGGGTGTGGCCACTATTACAGCCAAGCCAC AAATCAGGAATCTGAGTGCGGATGTCACCCGCTTTGTACCGTCCACGTTG CGAGTGAAGCGCGAGGATCAGCGACGCACGGCGAGGCCCAGGCATGCGGC CAACGATGGACACCACGCCCACTCCGAGGCGCACAGCAAGCCGCCCACCA AGGATGACGCCTATCTGCAGTTCATGAACGAGATGCAGGGCTTGCTGTAG CACGCAAAAGGAGTCGCGTAGTGGTAGCTGAGTAGTCTAAGTCCTAGATA AAACGTGTCATCCAAACCAATACCAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 2605908..2607086 | 1658..480 | 5895 | 100 | Minus |
chrX | 22417052 | chrX | 2605572..2605840 | 1924..1656 | 1345 | 100 | Minus |
chrX | 22417052 | chrX | 2607489..2607748 | 260..1 | 1285 | 99.6 | Minus |
chrX | 22417052 | chrX | 2607312..2607437 | 381..256 | 630 | 100 | Minus |
chrX | 22417052 | chrX | 2607150..2607248 | 479..381 | 495 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 2712092..2713270 | 1658..480 | 5895 | 100 | Minus |
X | 23542271 | X | 2711753..2712024 | 1927..1656 | 1360 | 100 | Minus |
X | 23542271 | X | 2713673..2713932 | 260..1 | 1285 | 99.6 | Minus |
X | 23542271 | X | 2713496..2713621 | 381..256 | 630 | 100 | Minus |
X | 23542271 | X | 2713334..2713432 | 479..381 | 495 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 2720190..2721368 | 1658..480 | 5895 | 100 | Minus |
X | 23527363 | X | 2719851..2720122 | 1927..1656 | 1360 | 100 | Minus |
X | 23527363 | X | 2721771..2722030 | 260..1 | 1285 | 99.6 | Minus |
X | 23527363 | X | 2721594..2721719 | 381..256 | 630 | 100 | Minus |
X | 23527363 | X | 2721432..2721530 | 479..381 | 495 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
frogger | 2483 | frogger FROGGER 2483bp | 1937..1982 | 1215..1173 | 123 | 80.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 2605572..2605838 | 1658..1924 | 100 | <- | Minus |
chrX | 2605909..2607086 | 480..1657 | 100 | <- | Minus |
chrX | 2607150..2607247 | 382..479 | 100 | <- | Minus |
chrX | 2607312..2607437 | 256..381 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2685-RA | 1..1659 | 192..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2685-RA | 1..1659 | 192..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2685-RA | 1..1659 | 192..1850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2685-RA | 26..1949 | 1..1924 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2685-RA | 29..1952 | 1..1924 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2685-RA | 29..1952 | 1..1924 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2711756..2712022 | 1658..1924 | 100 | <- | Minus |
X | 2712093..2713270 | 480..1657 | 100 | <- | Minus |
X | 2713334..2713431 | 382..479 | 100 | <- | Minus |
X | 2713496..2713621 | 256..381 | 100 | <- | Minus |
X | 2713678..2713932 | 1..255 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2711756..2712022 | 1658..1924 | 100 | <- | Minus |
X | 2712093..2713270 | 480..1657 | 100 | <- | Minus |
X | 2713334..2713431 | 382..479 | 100 | <- | Minus |
X | 2713496..2713621 | 256..381 | 100 | <- | Minus |
X | 2713678..2713932 | 1..255 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2711756..2712022 | 1658..1924 | 100 | <- | Minus |
X | 2712093..2713270 | 480..1657 | 100 | <- | Minus |
X | 2713334..2713431 | 382..479 | 100 | <- | Minus |
X | 2713496..2713621 | 256..381 | 100 | <- | Minus |
X | 2713678..2713932 | 1..255 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 2605789..2606055 | 1658..1924 | 100 | <- | Minus |
arm_X | 2606126..2607303 | 480..1657 | 100 | <- | Minus |
arm_X | 2607367..2607464 | 382..479 | 100 | <- | Minus |
arm_X | 2607529..2607654 | 256..381 | 100 | <- | Minus |
arm_X | 2607711..2607965 | 1..255 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2719854..2720120 | 1658..1924 | 100 | <- | Minus |
X | 2720191..2721368 | 480..1657 | 100 | <- | Minus |
X | 2721432..2721529 | 382..479 | 100 | <- | Minus |
X | 2721594..2721719 | 256..381 | 100 | <- | Minus |
X | 2721776..2722030 | 1..255 | 100 | Minus |
Translation from 191 to 1849
> LD47334.pep MGRRSINTTKSGKYMNPTDQARKEARKKELKKNKKQRQMVRAAVLKNKDP SQILEEMEKIDEMEYNVLQPSPLNEKVLRDKRKKLKETFDRVMRLYHNDE PEHWADLKRKEVEYEKKRLKKQQYYESVKHAQSVQIDEIPLPAPVSAVSG GSTETTGGSVVAGFGASVVIRLPPPPMTMALPPYAPGAPPGVSRNSDLAS EAQVEKSKENEQKDWLGVPPGPPPDLFAFSELNSDAEGNTDYDGEGEEEE PEPLKKGKDKEKDKNSEATEPNNQNIDDFMKEMEHVHKRKHRKLAAKEDE ADKKREEDDGKDIDKIEERTSDSDKRTASSTDDEDDDDQDEDENMPEVPT KPASVKSSTATPAPAPPTAPTLPTIPLPPASSVPAPPQLPHLPPIPNLGP PGIMYRPPPMRPPHPGSGFGIRMPPGPPPGPRAPHGLGPIPRMGIRMPPG PPPGLPPRLAHHNKQGGGAGAPKESAKGVATITAKPQIRNLSADVTRFVP STLRVKREDQRRTARPRHAANDGHHAHSEAHSKPPTKDDAYLQFMNEMQG LL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22486-PA | 561 | GF22486-PA | 1..294 | 1..295 | 1168 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18611-PA | 549 | GG18611-PA | 1..549 | 1..552 | 1797 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11943-PA | 580 | GH11943-PA | 1..309 | 1..312 | 1097 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2685-PA | 552 | CG2685-PA | 1..552 | 1..552 | 2942 | 100 | Plus |
Bap111-PA | 749 | CG7055-PA | 488..656 | 346..535 | 167 | 30.6 | Plus |
CG15021-PA | 420 | CG15021-PA | 282..397 | 341..454 | 158 | 38.5 | Plus |
CG15021-PA | 420 | CG15021-PA | 135..292 | 346..486 | 156 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14730-PA | 467 | GI14730-PA | 1..467 | 93..552 | 936 | 57.9 | Plus |
Dmoj\GI14729-PA | 72 | GI14729-PA | 1..71 | 1..71 | 365 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19810-PA | 519 | GL19810-PA | 1..516 | 1..518 | 1352 | 70.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15430-PA | 550 | GA15430-PA | 1..550 | 1..552 | 1490 | 70.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18859-PA | 554 | GM18859-PA | 1..554 | 1..552 | 2145 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16357-PA | 407 | GD16357-PA | 3..407 | 150..552 | 1406 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18536-PA | 574 | GJ18536-PA | 1..574 | 1..552 | 1412 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16223-PA | 620 | GK16223-PA | 1..331 | 1..310 | 1017 | 68 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16926-PA | 549 | GE16926-PA | 1..549 | 1..552 | 1801 | 89.2 | Plus |
Translation from 191 to 1849
> LD47334.hyp MGRRSINTTKSGKYMNPTDQARKEARKKELKKNKKQRQMVRAAVLKNKDP SQILEEMEKIDEMEYNVLQPSPLNEKVLRDKRKKLKETFDRVMRLYHNDE PEHWADLKRKEVEYEKKRLKKQQYYESVKHAQSVQIDEIPLPAPVSAVSG GSTETTGGSVVAGFGASVVIRLPPPPMTMALPPYAPGAPPGVSRNSDLAS EAQVEKSKENEQKDWLGVPPGPPPDLFAFSELNSDAEGNTDYDGEGEEEE PEPLKKGKDKEKDKNSEATEPNNQNIDDFMKEMEHVHKRKHRKLAAKEDE ADKKREEDDGKDIDKIEERTSDSDKRTASSTDDEDDDDQDEDENMPEVPT KPASVKSSTATPAPAPPTAPTLPTIPLPPASSVPAPPQLPHLPPIPNLGP PGIMYRPPPMRPPHPGSGFGIRMPPGPPPGPRAPHGLGPIPRMGIRMPPG PPPGLPPRLAHHNKQGGGAGAPKESAKGVATITAKPQIRNLSADVTRFVP STLRVKREDQRRTARPRHAANDGHHAHSEAHSKPPTKDDAYLQFMNEMQG LL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2685-PA | 552 | CG2685-PA | 1..552 | 1..552 | 2942 | 100 | Plus |
dalao-PA | 749 | CG7055-PA | 488..656 | 346..535 | 167 | 30.6 | Plus |
CG15021-PA | 420 | CG15021-PA | 282..397 | 341..454 | 158 | 38.5 | Plus |
CG15021-PA | 420 | CG15021-PA | 135..292 | 346..486 | 156 | 33.8 | Plus |