Clone LD47350 Report

Gene	Date	Evidence
CG15467	2001-01-01	Release 2 assignment
CG6824	2001-01-01	Release 2 assignment
CG6824	2002-03-20	Blastp of sequenced clone
ovo	2008-04-29	Release 5.5 accounting
ovo	2008-08-15	Release 5.9 accounting
ovo	2008-12-18	5.12 accounting

Clone Sequence Records

LD47350.complete Sequence

5514 bp (5514 high quality bases) assembled on 2002-03-20

GenBank Submission: AY094838

> LD47350.complete
TGAATGCACGTGTTTTCGCTTAACTCACCTGGGCGAATCCCAAAGACCAA
AGCAAACCATTAAACTCACATAAAACAATACAAATTATAAAAACGAAAAC
ACTGTGTTGTGCATCAATCAATATAGTAATATATTGAATTACATCCATAC
AAAACAGAAACAAAATTTTTTTTGAGTAATATTTTTTACAAGTGCGCTGA
ATAACACAAATAAATCAAGAACCCAACAAGTGTTTGAAAACCCAAAAAAT
AAATTGGGAAAAACAAAAATTTCTCATAACCGAATATTTTTTTTTTTTGA
AAACTTGGGGGAAAAATCAACACTTTTTTCGACAAGTCACCGAAAACTTA
AAAAAAAATTGATTTTTCAAAAAAAGAACCAAGACTCGACACTGCCGAAA
AGGCAATATTTTTCAAGTACATTTTTTCGAAGTGTTTTGACAAAACAAAG
CAAAATTCTCGAACCAAAGAACAAAATCACGAAAGGACACCCCAAAACAA
TCCCTCAATTATAATTGACTTGACTTTGACTTGCAAAGCCGAAGAACTTT
CAAAAGACATGAAGAGGGCAAAACAGAAGTTAACTTGAGCTCGGCTCATG
ACCAAATCAAAACTGAAATCAAGCAATTTTTTTTTTTTCAACACAGTGGA
CGAGCGGCGAACAAACATACACACACAATTGGATTAGTGTTTTGTTTATT
TCGGACCCACTGTAACTGTCCCTCGTCCACCTGAAAATACGAAGAAATTC
GTCGCCTCCTTGAATTCGTCGCGTGTCGCCGTCGCGTTTCGTTAAATCGC
TTATCGTTCATCGCAAATCAACCGATAATCCATCATGCCGAAGATTTTCC
TGATCAAAAATCGCCTGCATCAGCAGCAACAGCGCTTGCTTGAATCGCAA
AACTTGCTGCAGCACAAGAATCAGGATGATGAGCGCTTGGTGCCGCCCCT
CAGTCCAAGTGGGAGTGGTAGCGGCCCCTCGCCAACGCCCACATCCCAAC
CACCACCGGAACCGCAAGGTCAGGGGCAACAGGTGCTCGGACAGGTGCCC
GATTCAGATCAACAGCCACTGAGCCTCACGCGCAAACGATTCCACCATCG
TCGTCACTACTTCGGACAATCGCGCCACAGTCTCGATCATCTCAATCAAA
ATCAGAGCCCGAATCCAAATGCAAATGCAAATCCCAATCAAATACAAAAT
CCTGCGGAATTGGAAGTCGAATGCGCCACTGGCCAAGTTCAAAATGAAAA
CTTTGCCGCCGAGTTGCTGCAGCGTTTGACACCAAACACTGCCACCACTG
CACAAAATAATATTGTTAACAATTTGGTTAATAATAGCAGAGCCGCCACC
TCCGTTTTAGCCACTAAAGACTGTACAATTGAAAATTCCCCAATTAGCAT
ACCAAAAAATCAGCGAGCAGAGGACGAGGAGGAGCAAGAAGACCAGGAAA
AAGAGAAGCCCGCAGAGCGGGAGAGAGAGAAGTCCGATGAGAGGACAGAA
CAGGTAGAAAAGGAGGAGCGGGTGGAGCGCGAAGAGGAGGAGGACGACGA
GGTGGATGTCGGCGTAGAGGCGCCACGCCCACGATTCTATAATACCGGCG
TGGTCTTAACCCAGGCCCAACGCAAGGAGTATCCCCAAGAGCCCAAGGAC
TTATCCCTAACCATCGCCAAATCCTCGCCAGCTTCACCGCATATCCACAG
TGACTCCGAATCCGATTCGGACTCTGATGGGGGCTGCAAGCTAATTGTGG
ACGAGAAGCCACCATTGCCGGTGATCAAACCATTGTCCCTGCGCTTGCGC
AGCACACCGCCACCGGCGGATCAACGACCAAGTCCGCCGCCTCCGCGAGA
TCCCGCGCCCGCTGTCCGCTGCTCGGTGATCCAACGGGCGCCGCAATCCC
AATTGCCCACCAGCCGGGCTGGCTTCCTATTGCCCCCCTTGGATCAGCTA
GGACCCGAGCAGCAGGAGCCCATCGATTATCACGTGCCGAAGCGAAGGAG
CCCCTCTTATGACTCCGATGAGGAGCTGAACGCCAGGCGCCTGGAACGAG
CGCGGCAGGTGCGCGAGGCAAGACGACGCAGCACCATTTTGGCCGCACGA
GTTCTGCTCGCCCAGTCCCAAAGGCTTAATCCGCGCTTGGTGCGATCCTT
GCCCGGTATTTTGGCTGCGGCAGCCGGACACGGACGGAATAGCAGCAGTT
CCAGCGGTGCCGCCGGGCAGGGCTTTCAATCGTCCGGTTTTGGCAGCCAA
AACAGCGGCAGCGGCTCGTCCAGTGGCAATCAGAACGCCGGCAGCGGCGC
TGGTTCACCTGGATCTGGTGCCGGTGGCGGTGGTGGTATGGGCGGTGGTC
GCGACGGCCGAGGGAACTACGGACCCAATTCACCGCCAACGGGAGCATTG
CCTCCGTTTTATGAGAGCCTCAAGAGCGGCCAACAGAGCACGGCCAGCAA
CAATACGGGCCAAAGTCCCGGCGCTAATCATTCGCATTTCAACGCAAATC
CAGCGAATTTTCTGCAAAACGCAGCAGCGGCTGCGTACATCATGTCGGCA
GGTTCCGGTGGAGGAGGCTGCACCGGAAACGGAGGTGGTGGAGCATCGGG
GCCAGGAGGTGGCCCATCGGCAAATAGTGGTGGTGGTGGTGGTGGTGGCG
GCGGCAATGGGTACATCAACTGTGGTGGTGTTGGTGGTCCAAACAATAGT
CTCGACGGTAATAATCTATTGAACTTCGCCAGTGTTTCTAACTATAACGA
ATCCAATTCCAAATTCCATAATCATCATCATCATCATCAACACAACAACA
ACAACAACAACAATGGTGGTCAAACATCTATGATGGGTCATCCCTTTTAC
GGCGGTAATCCCTCAGCCTACGGCATAATACTCAAGGATGAACCGGACAT
TGAGTACGACGAGGCCAAGATCGATATTGGCACCTTTGCGCAGAACATTA
TCCAGGCAACGATGGGCAGCTCCGGTCAGTTCAATGCCAGCGCCTATGAG
GATGCTATAATGTCGGACCTGGCCAGTTCGGGTCAGTGTCCCAATGGAGC
CGTCGATCCGCTTCAGTTCACAGCCACTCTGATGCTGAGTTCGCAGACCG
ATCATTTACTGGAGCAGCTGTCCGATGCCGTGGACTTGAGTTCATTCCTG
CAAAGGAGCTGCGTGGACGACGAGGAGTCCACCAGTCCGCGGCAGGATTT
CGAGCTGGTGTCCACGCCCTCGCTAACGCCGGATTCAGTGACGCCGGTGG
AGCAGCACAATACCAATACAACCCAGCTGGATGTCCTGCACGAGAATCTG
TTGACGCAGCTGACCCACAATATAGTCCGGGGCGGCAGCAATCAGCAGCA
GCAGCACCATCAACAGCATGGTGTGCAGCAGCAACAGCAGCAGCAGCATA
GTGTGCAGCAGCAACAGCAGCACAATGTGCAACAGCAGCATGGCGTGCAG
CAGCAACATGTCCAGCAGCAACCACCGCCCTCGTATCAGCATGCCACGCG
TGGCCTGATGATGCAACAGCAGCCGCAGCACGGCGGCTATCAGCAGCAAG
CTGCCATCATGTCGCAACAGCAGCAGCAATTGCTCAGCCAGCAGCAGCAG
CAGTCGCACCACCAGCAGCAGCAGCAGCAGCAACATGCCGCTGCCTACCA
GCAGCACAACATCTATGCACAGCAGCAACAGCAGCAGCAGCAGCAGCATC
ATCAACAGCAGCAACAGCAGCAACATCATCACTTCCACCACCAGCAACAA
CAGCAGCCACAGCCACAGTCGCATCATTCGCACCATCATGGCCATGGTCA
TGACAACAGCAACATGTCGCTTCCCTCGCCAACTGCGGCTGCAGCGGCGG
CGGCCGCTGCTGCTGCTGCTGCGGCAGCCGCAGCCGCTCATCTGCAGCGT
CCGATGAGCAGCAGCAGCAGCTCCGGCGGCACCAATAGCAGCAACAGTAG
CGGTGGCAGCAGCAACAGTCCGCTCCTAGATGCAAACGCTGCTGCGGCAG
CTGCAGCTGCTTTGTTGGACACAAAGCCACTCATCCAAAGCTTGGGCTTG
CCGCCGGATCTGCAGCTTGAGTTTGTGAACGGCGGCCATGGCATTAAGAA
CCCGCTGGCCGTGGAGAATGCCCACGGTGGCCATCACCGAATTCGCAACA
TCGATTGCATTGATGATCTCAGCAAGCATGGCCACCACTCGCAGCACCAA
CAGCAGCAGGGCTCGCCGCAGCAGCAAAATATGCAACAATCGGTGCAACA
GCAGTCGGTGCAACAGCAGCAATCCCTGCAGCAGCAACAGCAGCAGCAGC
ACCATCAGCACCACAGTAACAGCAGTGCAAGCAGCAATGCCAGCAGTCAT
GGATCCGCCGAAGCCCTTTGCATGGGCTCATCCGGCGGAGCCAATGAGGA
TTCGTCGTCGGGCAACAATAAGTTCGTCTGCCGCGTCTGCATGAAGACAT
TCTCGCTGCAGCGCCTGCTCAATCGGCACATGAAGTGTCACTCGGACATC
AAGCGGTATCTGTGCACGTTCTGCGGCAAGGGATTCAACGACACCTTCGA
CCTCAAGCGCCACACGCGCACCCACACGGGCGTCCGGCCGTACAAGTGCA
ATCTCTGCGAGAAGAGCTTCACGCAGCGCTGTTCCCTCGAGTCGCACTGC
CAGAAGGTGCATAGCGTTCAGCACCAGTATGCCTACAAGGAGCGCAGAGC
CAAGATGTACGTGTGCGAGGAGTGCGGACACACCACCTGCGAGCCGGAGG
TCCACTATCTGCACCTGAAGAACAACCATCCGTTCTCGCCGGCGCTGCTT
AAGTTCTACGACAAGCGGCACTTTAAGTTCACCAACTCGCAGTTCGCCAA
CAATCTGCTCGGCCAGCTGCCCATGCCAGTCCACAATTAGTTGATGGATT
TTAGTTATATAGAATAGGAACCATTCGATCGATTCGAATCATTCGAATAA
CTCGAATCACTCGAATCACTCGAATCACTTAAGCAAACCAACATTGTGAC
TTTGAAGTTTTTTGAAAACTGCCCCCCCCTCCTTTTGCGGAGGATACGGA
ATTATTGGAGATTATGCTTATTATGTATATTTTTGCGTAGTCCTAAGAAA
ATTAGTTACTAGTTACTAGCTGAATTAGTACCCACTGTATCATGCTACCC
CACTTCACTTTGCTGTGCAAATCTCTCTCACTTGAGAAAACTCGAGTTCC
CTTTTCTTTATTGTTAATCTTGAATTTTCGTTTATTTCAAGTATGGATCT
TTCGAAAAAAAAAACTCGTTGTTAGTCAAAAAGAAAGGTATCGTTAGGAC
GTAAGAAATGTTTGAAAATGCTTTGAGCAACACTCACACAAATTATGAAT
GATCGCGTATACATATATTAGAAGAAAATATATATTAAATATTTAGCTTT
AAGATGTTAAGAGCTACCAACCGAACAAGCTGCAAACGTTGGCATTTATT
TGTCTTCAACAAAACAGAACACAAATCAAAAAACAAAAACTTCGAAAAAA
AAAAAAAAAAAAAA

LD47350.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:23:19

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
ovo-RB	6799	ovo-RB	61..5574	1..5514	27540	99.9	Plus
ovo-RE	6799	ovo-RE	61..5574	1..5514	27540	99.9	Plus
ovo.m	6067	ovo.m	88..2883	1246..4041	13980	100	Plus
ovo.m	6067	ovo.m	3416..4890	4040..5514	7360	99.9	Plus

Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:09:36

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chrX	22417052	chrX	4957198..4959984	1246..4041	13795	99.6	Plus
chrX	22417052	chrX	4941039..4942282	1..1246	6045	99.4	Plus
chrX	22417052	chrX	4961630..4962421	4703..5494	3960	100	Plus
chrX	22417052	chrX	4960873..4961535	4042..4704	3315	100	Plus

Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:44:05 has no hits.

Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:09:32

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
X	23542271	X	5064452..5067247	1246..4041	13980	100	Plus
X	23542271	X	5048297..5049542	1..1246	6215	99.9	Plus
X	23542271	X	5068893..5069704	4703..5514	4045	99.9	Plus
X	23542271	X	5068136..5068798	4042..4704	3315	100	Plus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:10:41

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
X	23527363	X	5072550..5075345	1246..4041	13980	100	Plus
X	23527363	X	5056395..5057640	1..1246	6215	99.9	Plus
X	23527363	X	5076991..5077802	4703..5514	4045	99.8	Plus
X	23527363	X	5076234..5076896	4042..4704	3315	100	Plus
3L	28103327	3L	18773124..18773216	3763..3671	240	83.8	Minus
X	23527363	X	6543912..6544000	3675..3763	235	84.2	Plus
X	23527363	X	9063795..9063889	3763..3669	205	81	Minus
X	23527363	X	21880732..21880813	3671..3752	200	82.9	Plus
X	23527363	X	20822937..20823018	3671..3752	200	82.9	Plus
X	23527363	X	11752799..11752880	3671..3752	200	82.9	Plus
X	23527363	X	8957981..8958062	3671..3752	200	82.9	Plus
X	23527363	X	7134479..7134560	3671..3752	200	82.9	Plus
X	23527363	X	3619341..3619422	3671..3752	200	82.9	Plus
X	23527363	X	3606775..3606856	3671..3752	200	82.9	Plus
X	23527363	X	2409061..2409142	3671..3752	200	82.9	Plus
X	23527363	X	1072997..1073078	3671..3752	200	82.9	Plus
X	23527363	X	169981..170062	3671..3752	200	82.9	Plus
X	23527363	X	5761075..5761159	3679..3763	200	82.3	Plus
X	23527363	X	21534730..21534811	3752..3671	200	82.9	Minus
X	23527363	X	18972677..18972758	3752..3671	200	82.9	Minus
X	23527363	X	16356772..16356853	3752..3671	200	82.9	Minus
X	23527363	X	16238075..16238156	3752..3671	200	82.9	Minus
X	23527363	X	3234596..3234677	3752..3671	200	82.9	Minus
X	23527363	X	2839275..2839356	3752..3671	200	82.9	Minus
X	23527363	X	1753215..1753296	3752..3671	200	82.9	Minus
X	23527363	X	10698132..10698213	3752..3671	200	82.9	Minus
X	23527363	X	10283396..10283477	3752..3671	200	82.9	Minus
X	23527363	X	5004203..5004284	3752..3671	200	82.9	Minus
X	23527363	X	3509185..3509266	3752..3671	200	82.9	Minus
3L	28103327	3L	21300384..21300465	3671..3752	200	82.9	Plus
3L	28103327	3L	18041840..18041921	3671..3752	200	82.9	Plus
3L	28103327	3L	17079228..17079309	3671..3752	200	82.9	Plus
3L	28103327	3L	16939955..16940036	3671..3752	200	82.9	Plus
3L	28103327	3L	13798771..13798852	3671..3752	200	82.9	Plus
3L	28103327	3L	13519375..13519456	3671..3752	200	82.9	Plus
3L	28103327	3L	7911073..7911154	3671..3752	200	82.9	Plus
3L	28103327	3L	6399880..6399961	3671..3752	200	82.9	Plus
3L	28103327	3L	2448625..2448706	3671..3752	200	82.9	Plus
3L	28103327	3L	24012697..24012778	3752..3671	200	82.9	Minus
3L	28103327	3L	20114765..20114846	3752..3671	200	82.9	Minus
3L	28103327	3L	19849608..19849689	3752..3671	200	82.9	Minus
3L	28103327	3L	18529735..18529816	3752..3671	200	82.9	Minus
3L	28103327	3L	15930292..15930373	3752..3671	200	82.9	Minus
3L	28103327	3L	13812286..13812367	3752..3671	200	82.9	Minus
3L	28103327	3L	11500163..11500244	3752..3671	200	82.9	Minus
3L	28103327	3L	9270320..9270401	3752..3671	200	82.9	Minus
3L	28103327	3L	8482879..8482960	3752..3671	200	82.9	Minus
3L	28103327	3L	5042154..5042235	3752..3671	200	82.9	Minus
3L	28103327	3L	118218..118299	3752..3671	200	82.9	Minus
3L	28103327	3L	14020815..14020902	3757..3670	200	81.8	Minus
2L	23513712	2L	21442197..21442278	3671..3752	200	82.9	Plus
2L	23513712	2L	19653617..19653698	3671..3752	200	82.9	Plus
2L	23513712	2L	18053001..18053082	3671..3752	200	82.9	Plus
2L	23513712	2L	10948123..10948204	3671..3752	200	82.9	Plus
2L	23513712	2L	8453555..8453636	3671..3752	200	82.9	Plus
2L	23513712	2L	6437079..6437160	3671..3752	200	82.9	Plus
2L	23513712	2L	6427976..6428057	3671..3752	200	82.9	Plus
2L	23513712	2L	22613602..22613683	3752..3671	200	82.9	Minus
2L	23513712	2L	21989689..21989770	3752..3671	200	82.9	Minus
2L	23513712	2L	21569073..21569154	3752..3671	200	82.9	Minus
2L	23513712	2L	19711532..19711613	3752..3671	200	82.9	Minus
2L	23513712	2L	14650577..14650658	3752..3671	200	82.9	Minus
2L	23513712	2L	13861080..13861161	3752..3671	200	82.9	Minus
2L	23513712	2L	9006636..9006717	3752..3671	200	82.9	Minus
2L	23513712	2L	2108371..2108452	3752..3671	200	82.9	Minus
2L	23513712	2L	1499289..1499382	3763..3670	200	80.8	Minus
2L	23513712	2L	23406792..23406873	3671..3752	200	82.9	Plus
2L	23513712	2L	23360212..23360293	3671..3752	200	82.9	Plus
2L	23513712	2L	21598153..21598234	3671..3752	200	82.9	Plus
3R	31820162	3R	30138172..30138253	3671..3752	200	82.9	Plus
3R	31820162	3R	27263115..27263196	3671..3752	200	82.9	Plus
3R	31820162	3R	25574668..25574749	3671..3752	200	82.9	Plus
3R	31820162	3R	23577359..23577440	3671..3752	200	82.9	Plus
3R	31820162	3R	19183472..19183553	3671..3752	200	82.9	Plus
3R	31820162	3R	13936384..13936465	3671..3752	200	82.9	Plus
3R	31820162	3R	8144969..8145050	3671..3752	200	82.9	Plus
3R	31820162	3R	23979648..23979738	3670..3760	200	81.3	Plus
3R	31820162	3R	31636332..31636413	3752..3671	200	82.9	Minus
3R	31820162	3R	26125163..26125244	3752..3671	200	82.9	Minus
3R	31820162	3R	25474666..25474747	3752..3671	200	82.9	Minus
3R	31820162	3R	21988329..21988410	3752..3671	200	82.9	Minus
3R	31820162	3R	19905528..19905609	3752..3671	200	82.9	Minus
3R	31820162	3R	11128062..11128143	3752..3671	200	82.9	Minus
3R	31820162	3R	8350597..8350678	3752..3671	200	82.9	Minus
3R	31820162	3R	4114793..4114874	3752..3671	200	82.9	Minus
2R	25260384	2R	25152648..25152729	3671..3752	200	82.9	Plus
2R	25260384	2R	24355761..24355842	3671..3752	200	82.9	Plus
2R	25260384	2R	21811857..21811938	3671..3752	200	82.9	Plus
2R	25260384	2R	12709847..12709928	3671..3752	200	82.9	Plus
2R	25260384	2R	18371289..18371370	3752..3671	200	82.9	Minus
2R	25260384	2R	14102634..14102715	3752..3671	200	82.9	Minus
2R	25260384	2R	12797698..12797779	3752..3671	200	82.9	Minus
2R	25260384	2R	11019020..11019101	3752..3671	200	82.9	Minus
2R	25260384	2R	10186085..10186166	3752..3671	200	82.9	Minus
2R	25260384	2R	9361420..9361501	3752..3671	200	82.9	Minus
2R	25260384	2R	7217632..7217713	3752..3671	200	82.9	Minus
2R	25260384	2R	2420260..2420341	3752..3671	200	82.9	Minus
2R	25260384	2R	2417023..2417104	3752..3671	200	82.9	Minus
Y	3410481	Y	771537..771618	3671..3752	200	82.9	Plus
X	23527363	X	11364801..11364884	3674..3757	195	82.1	Plus
X	23527363	X	4092105..4092190	3669..3757	195	83.1	Plus

Blast to na_te.dros performed 2019-03-16 11:09:34

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2309..2966	3669..4346	497	57.9	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2272..2989	3484..4205	445	57.8	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2270..2922	3647..4344	411	57.7	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6725..6900	4170..4345	339	69.4	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2348..2865	3513..4010	335	58.5	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6722..7219	3448..3949	322	57.6	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2625..3012	3336..3741	316	60.7	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6720..6867	4196..4345	304	68.9	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2328..2511	4183..4364	266	63.4	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2328..2512	4170..4345	256	62.7	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6767..6923	4170..4323	255	65.2	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2312..2461	4191..4336	247	66	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6393..6952	3386..3950	243	54.2	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6779..6921	4170..4313	231	63.2	Plus
Dmer\R1A3	3772	Dmer\R1A3 MERCR1A3 3772bp	628..737	4288..4178	211	70.4	Minus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2375..2535	4169..4323	207	62.8	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6815..6977	4170..4331	199	60.4	Plus
roo	9092	roo DM_ROO 9092bp	1064..1165	4183..4287	176	64.8	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6846..7003	4175..4330	145	56.3	Plus
copia	5143	copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4).	1174..1220	5235..5189	136	76.6	Minus
gypsy11	4428	gypsy11 GYPSY11 4428bp	948..1006	4169..4229	129	70.5	Plus

LD47350.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:10:25 Download gff for LD47350.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chrX	4961632..4962421	4705..5494	91		Plus
chrX	4941039..4942282	1..1246	99	->	Plus
chrX	4957199..4957371	1247..1419	100	==	Plus
chrX	4957509..4959292	1557..3340	97	==	Plus
chrX	4959410..4959488	3458..3536	100	==	Plus
chrX	4959714..4959775	3771..3832	100	==	Plus
chrX	4959832..4959849	3889..3906	100	==	Plus
chrX	4959912..4959984	3969..4041	100	->	Plus
chrX	4960873..4961021	4042..4190	100	==	Plus
chrX	4961157..4961535	4326..4704	100	->	Plus

Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:04:39 Download gff for LD47350.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
ovo-RB	1..4056	835..4890	100		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:47:49 Download gff for LD47350.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
ovo-RE	1..4056	835..4890	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 13:02:33 Download gff for LD47350.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
ovo-RB	1..4056	835..4890	100		Plus

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:41:41 Download gff for LD47350.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
ovo-RB	1..4056	835..4890	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:29:10 Download gff for LD47350.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
ovo-RB	1..4056	835..4890	100		Plus

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:04:38 Download gff for LD47350.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
ovo-RB	1..5494	1..5494	99		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:47:49 Download gff for LD47350.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
ovo-RE	1..5494	1..5494	99		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:02:33 Download gff for LD47350.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
ovo-RB	25..5518	1..5494	99		Plus

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:41:41 Download gff for LD47350.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
ovo-RB	1..5494	1..5494	99		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:29:10 Download gff for LD47350.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
ovo-RB	25..5518	1..5494	99		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:10:25 Download gff for LD47350.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	5048297..5049542	1..1246	99	->	Plus
X	5064453..5067247	1247..4041	100	->	Plus
X	5068136..5068798	4042..4704	100	->	Plus
X	5068895..5069684	4705..5494	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:10:25 Download gff for LD47350.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	5048297..5049542	1..1246	99	->	Plus
X	5064453..5067247	1247..4041	100	->	Plus
X	5068136..5068798	4042..4704	100	->	Plus
X	5068895..5069684	4705..5494	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:10:25 Download gff for LD47350.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	5048297..5049542	1..1246	99	->	Plus
X	5064453..5067247	1247..4041	100	->	Plus
X	5068136..5068798	4042..4704	100	->	Plus
X	5068895..5069684	4705..5494	100		Plus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:02:33 Download gff for LD47350.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_X	4942330..4943575	1..1246	99	->	Plus
arm_X	4958486..4961280	1247..4041	100	->	Plus
arm_X	4962169..4962831	4042..4704	100	->	Plus
arm_X	4962928..4963717	4705..5494	100		Plus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:33:19 Download gff for LD47350.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	5056395..5057640	1..1246	99	->	Plus
X	5072551..5075345	1247..4041	100	->	Plus
X	5076234..5076896	4042..4704	100	->	Plus
X	5076993..5077782	4705..5494	100		Plus

LD47350.pep Sequence

Translation from 834 to 4889

> LD47350.pep
MPKIFLIKNRLHQQQQRLLESQNLLQHKNQDDERLVPPLSPSGSGSGPSP
TPTSQPPPEPQGQGQQVLGQVPDSDQQPLSLTRKRFHHRRHYFGQSRHSL
DHLNQNQSPNPNANANPNQIQNPAELEVECATGQVQNENFAAELLQRLTP
NTATTAQNNIVNNLVNNSRAATSVLATKDCTIENSPISIPKNQRAEDEEE
QEDQEKEKPAEREREKSDERTEQVEKEERVEREEEEDDEVDVGVEAPRPR
FYNTGVVLTQAQRKEYPQEPKDLSLTIAKSSPASPHIHSDSESDSDSDGG
CKLIVDEKPPLPVIKPLSLRLRSTPPPADQRPSPPPPRDPAPAVRCSVIQ
RAPQSQLPTSRAGFLLPPLDQLGPEQQEPIDYHVPKRRSPSYDSDEELNA
RRLERARQVREARRRSTILAARVLLAQSQRLNPRLVRSLPGILAAAAGHG
RNSSSSSGAAGQGFQSSGFGSQNSGSGSSSGNQNAGSGAGSPGSGAGGGG
GMGGGRDGRGNYGPNSPPTGALPPFYESLKSGQQSTASNNTGQSPGANHS
HFNANPANFLQNAAAAAYIMSAGSGGGGCTGNGGGGASGPGGGPSANSGG
GGGGGGGNGYINCGGVGGPNNSLDGNNLLNFASVSNYNESNSKFHNHHHH
HQHNNNNNNNGGQTSMMGHPFYGGNPSAYGIILKDEPDIEYDEAKIDIGT
FAQNIIQATMGSSGQFNASAYEDAIMSDLASSGQCPNGAVDPLQFTATLM
LSSQTDHLLEQLSDAVDLSSFLQRSCVDDEESTSPRQDFELVSTPSLTPD
SVTPVEQHNTNTTQLDVLHENLLTQLTHNIVRGGSNQQQQHHQQHGVQQQ
QQQQHSVQQQQQHNVQQQHGVQQQHVQQQPPPSYQHATRGLMMQQQPQHG
GYQQQAAIMSQQQQQLLSQQQQQSHHQQQQQQQHAAAYQQHNIYAQQQQQ
QQQQHHQQQQQQQHHHFHHQQQQQPQPQSHHSHHHGHGHDNSNMSLPSPT
AAAAAAAAAAAAAAAAAAHLQRPMSSSSSSGGTNSSNSSGGSSNSPLLDA
NAAAAAAAALLDTKPLIQSLGLPPDLQLEFVNGGHGIKNPLAVENAHGGH
HRIRNIDCIDDLSKHGHHSQHQQQQGSPQQQNMQQSVQQQSVQQQQSLQQ
QQQQQHHQHHSNSSASSNASSHGSAEALCMGSSGGANEDSSSGNNKFVCR
VCMKTFSLQRLLNRHMKCHSDIKRYLCTFCGKGFNDTFDLKRHTRTHTGV
RPYKCNLCEKSFTQRCSLESHCQKVHSVQHQYAYKERRAKMYVCEECGHT
TCEPEVHYLHLKNNHPFSPALLKFYDKRHFKFTNSQFANNLLGQLPMPVH
N*

LD47350.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 23:49:12

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF20355-PA	1453	GF20355-PA	1..581	1..572	1246	67.2	Plus
Dana\GF20355-PA	1453	GF20355-PA	1279..1453	1176..1351	974	95.5	Plus
Dana\GF20355-PA	1453	GF20355-PA	635..875	675..902	805	78	Plus
Dana\GF10411-PA	555	GF10411-PA	409..497	1185..1274	207	42.2	Plus
Dana\GF20350-PA	545	GF20350-PA	179..283	1199..1297	163	34	Plus
Dana\GF16538-PA	601	GF16538-PA	220..356	1188..1298	163	30.7	Plus
Dana\GF19706-PA	454	GF19706-PA	171..299	1192..1303	162	30.2	Plus
Dana\GF19706-PA	454	GF19706-PA	227..313	1192..1278	161	34.5	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 23:49:22

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG18741-PA	1452	GG18741-PA	1..1010	1..1067	2709	87.6	Plus
Dere\GG18741-PA	1452	GG18741-PA	1154..1452	1056..1351	1248	88.3	Plus
Dere\GG13774-PA	542	GG13774-PA	403..491	1185..1274	210	43.3	Plus
Dere\GG22424-PA	278	GG22424-PA	48..120	1199..1271	181	42.5	Plus
Dere\GG23037-PA	502	GG23037-PA	240..339	1187..1297	177	34.2	Plus
Dere\GG23037-PA	502	GG23037-PA	205..311	1181..1297	176	31.4	Plus
Dere\GG15664-PA	340	GG15664-PA	183..301	1198..1327	174	32.3	Plus
Dere\GG22424-PA	278	GG22424-PA	23..148	1146..1271	154	28.9	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 23:49:39

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH24684-PA	1689	GH24684-PA	1521..1689	1178..1351	936	93.7	Plus
Dgri\GH24684-PA	1689	GH24684-PA	269..517	243..451	479	54	Plus
Dgri\GH18613-PA	627	GH18613-PA	290..513	1058..1283	214	27.4	Plus
Dgri\GH16734-PA	568	GH16734-PA	429..517	1185..1274	201	42.2	Plus
Dgri\GH24275-PA	1404	GH24275-PA	668..747	1194..1273	187	42.5	Plus
Dgri\GH17362-PA	563	GH17362-PA	156..297	1181..1298	181	32.4	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:58:20

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
ovo-PE	1351	CG6824-PE	1..1351	1..1351	7180	100	Plus
ovo-PB	1351	CG6824-PB	1..1351	1..1351	7180	100	Plus
ovo-PC	1222	CG6824-PC	9..1222	138..1351	6441	99.9	Plus
ovo-PD	1028	CG6824-PD	1..572	502..1073	3032	99.5	Plus
ovo-PA	975	CG6824-PA	1..519	502..1073	2635	89.9	Plus
ovo-PD	1028	CG6824-PD	440..1028	828..1351	1648	60.4	Plus
ovo-PA	975	CG6824-PA	387..975	828..1351	1648	60.4	Plus
dar1-PB	751	CG12029-PB	8..745	532..1274	379	25.1	Plus
sr-PE	906	CG7847-PE	201..834	736..1312	362	25.9	Plus
sr-PB	906	CG7847-PB	201..834	736..1312	362	25.9	Plus
sr-PA	1186	CG7847-PA	481..1114	736..1312	362	25.9	Plus
sr-PD	1271	CG7847-PD	481..1114	736..1312	362	25.9	Plus
Smr-PG	3607	CG4013-PG	30..416	809..1195	358	31.9	Plus
Smr-PF	3601	CG4013-PF	30..410	809..1195	356	31.9	Plus
Smr-PE	3601	CG4013-PE	30..410	809..1195	356	31.9	Plus
Smr-PD	3601	CG4013-PD	30..410	809..1195	356	31.9	Plus
Smr-PG	3607	CG4013-PG	5..416	792..1194	349	30.5	Plus
Smr-PF	3601	CG4013-PF	5..410	792..1194	343	30.7	Plus
Smr-PE	3601	CG4013-PE	5..410	792..1194	343	30.7	Plus
Smr-PD	3601	CG4013-PD	5..410	792..1194	343	30.7	Plus
Hr4-PC	1518	CG43934-PC	122..818	441..1191	311	23.7	Plus
Hr4-PD	1529	CG43934-PD	132..828	441..1191	311	23.7	Plus
Hr4-PF	1611	CG43934-PF	215..911	441..1191	311	23.7	Plus
Hr4-PE	1842	CG43934-PE	446..1142	441..1191	311	23.7	Plus
Hr4-PK	1843	CG43934-PK	446..1142	441..1191	311	23.7	Plus
Hr4-PJ	1843	CG43934-PJ	446..1142	441..1191	311	23.7	Plus
Hr4-PH	1863	CG43934-PH	122..818	441..1191	311	23.7	Plus
Hr4-PG	1986	CG43934-PG	589..1285	441..1191	311	23.7	Plus
Hr4-PI	2123	CG43934-PI	122..818	441..1191	311	23.7	Plus
Smr-PF	3601	CG4013-PF	12..530	616..1156	289	26.4	Plus
Smr-PE	3601	CG4013-PE	12..530	616..1156	289	26.4	Plus
Smr-PD	3601	CG4013-PD	12..530	616..1156	289	26.4	Plus
sens-PA	541	CG32120-PA	353..490	1131..1274	289	41	Plus
Smr-PG	3607	CG4013-PG	12..536	616..1156	283	25.8	Plus
fs(1)h-PB	2038	CG2252-PB	1347..1756	799..1194	283	27.4	Plus
fs(1)h-PG	2046	CG2252-PG	1355..1764	799..1194	283	27.4	Plus
Lasp-PC	636	CG3849-PC	157..576	838..1175	281	30	Plus
Lasp-PB	657	CG3849-PB	178..597	838..1175	281	30	Plus
Rim-PAA	1358	CG33547-PAA	218..604	837..1192	280	28.6	Plus
Rim-PS	1399	CG33547-PS	218..604	837..1192	280	28.6	Plus
Rim-PQ	1931	CG33547-PQ	218..604	837..1192	280	28.6	Plus
Rim-PR	1941	CG33547-PR	218..604	837..1192	280	28.6	Plus
Rim-PX	1955	CG33547-PX	218..604	837..1192	280	28.6	Plus
Rim-PU	1955	CG33547-PU	218..604	837..1192	280	28.6	Plus
Rim-PV	1965	CG33547-PV	218..604	837..1192	280	28.6	Plus
Rim-PW	2595	CG33547-PW	218..604	837..1192	280	28.6	Plus
Rim-PP	2792	CG33547-PP	218..604	837..1192	280	28.6	Plus
Rim-PK	2798	CG33547-PK	218..604	837..1192	280	28.6	Plus
Rim-PF	2798	CG33547-PF	218..604	837..1192	280	28.6	Plus
mam-PD	1594	CG8118-PD	643..1031	833..1178	279	29.2	Plus
mam-PB	1594	CG8118-PB	643..1031	833..1178	279	29.2	Plus
mam-PA	1594	CG8118-PA	643..1031	833..1178	279	29.2	Plus
srp-PB	1249	CG3992-PB	208..563	923..1282	273	30.7	Plus
srp-PA	1264	CG3992-PA	208..563	923..1282	273	30.7	Plus
velo-PC	1833	CG10107-PC	65..348	827..1155	269	31	Plus
velo-PA	1833	CG10107-PA	65..348	827..1155	269	31	Plus
srp-PB	1249	CG3992-PB	385..622	810..1045	265	35.2	Plus
srp-PA	1264	CG3992-PA	385..622	810..1045	265	35.2	Plus
CG32772-PE	520	CG32772-PE	72..259	1127..1334	263	31.2	Plus
CG32772-PC	520	CG32772-PC	72..259	1127..1334	263	31.2	Plus
CG10543-PD	1631	CG10543-PD	1065..1525	791..1192	262	26.7	Plus
CG10543-PE	1634	CG10543-PE	1068..1528	791..1192	262	26.7	Plus
CG10543-PA	1634	CG10543-PA	1068..1528	791..1192	262	26.7	Plus
mam-PD	1594	CG8118-PD	348..1079	436..1164	259	24.8	Plus
mam-PB	1594	CG8118-PB	348..1079	436..1164	259	24.8	Plus
mam-PA	1594	CG8118-PA	348..1079	436..1164	259	24.8	Plus
fs(1)h-PB	2038	CG2252-PB	1037..1769	427..1045	236	23	Plus
Hr4-PC	1518	CG43934-PC	1006..1240	828..1030	235	31.1	Plus
Hr4-PD	1529	CG43934-PD	1016..1250	828..1030	235	31.1	Plus
Hr4-PF	1611	CG43934-PF	1099..1333	828..1030	235	31.1	Plus
Hr4-PE	1842	CG43934-PE	1330..1564	828..1030	235	31.1	Plus
Hr4-PK	1843	CG43934-PK	1330..1564	828..1030	235	31.1	Plus
Hr4-PJ	1843	CG43934-PJ	1330..1564	828..1030	235	31.1	Plus
Hr4-PH	1863	CG43934-PH	1006..1240	828..1030	235	31.1	Plus
Hr4-PG	1986	CG43934-PG	1473..1707	828..1030	235	31.1	Plus
Hr4-PI	2123	CG43934-PI	1006..1240	828..1030	235	31.1	Plus
Hr4-PC	1518	CG43934-PC	1020..1205	918..1174	222	30	Plus
Hr4-PD	1529	CG43934-PD	1030..1215	918..1174	222	30	Plus
Hr4-PF	1611	CG43934-PF	1113..1298	918..1174	222	30	Plus
Hr4-PE	1842	CG43934-PE	1344..1529	918..1174	222	30	Plus
Hr4-PK	1843	CG43934-PK	1344..1529	918..1174	222	30	Plus
Hr4-PJ	1843	CG43934-PJ	1344..1529	918..1174	222	30	Plus
Hr4-PH	1863	CG43934-PH	1020..1205	918..1174	222	30	Plus
Hr4-PG	1986	CG43934-PG	1487..1672	918..1174	222	30	Plus
Hr4-PI	2123	CG43934-PI	1020..1205	918..1174	222	30	Plus
fs(1)h-PG	2046	CG2252-PG	1037..1777	427..1045	217	22.8	Plus
velo-PC	1833	CG10107-PC	183..555	844..1158	207	29.5	Plus
velo-PA	1833	CG10107-PA	183..555	844..1158	207	29.5	Plus
CG10543-PD	1631	CG10543-PD	1056..1233	823..999	204	35.6	Plus
CG10543-PE	1634	CG10543-PE	1059..1236	823..999	204	35.6	Plus
CG10543-PA	1634	CG10543-PA	1059..1236	823..999	204	35.6	Plus
Smr-PG	3607	CG4013-PG	508..832	823..1174	192	26	Plus
Smr-PF	3601	CG4013-PF	502..826	823..1174	192	26	Plus
Smr-PE	3601	CG4013-PE	502..826	823..1174	192	26	Plus
Smr-PD	3601	CG4013-PD	502..826	823..1174	192	26	Plus
Lasp-PC	636	CG3849-PC	122..382	899..1188	187	26	Plus
fs(1)h-PB	2038	CG2252-PB	1696..1918	396..616	182	27.9	Plus
fs(1)h-PG	2046	CG2252-PG	1704..1926	396..616	182	27.9	Plus
mam-PD	1594	CG8118-PD	14..220	905..1167	181	27.1	Plus
mam-PB	1594	CG8118-PB	14..220	905..1167	181	27.1	Plus
mam-PA	1594	CG8118-PA	14..220	905..1167	181	27.1	Plus
Lasp-PB	657	CG3849-PB	177..403	926..1188	180	27.1	Plus
Rim-PAA	1358	CG33547-PAA	283..449	836..989	174	32.2	Plus
Rim-PS	1399	CG33547-PS	283..449	836..989	174	32.2	Plus
Rim-PQ	1931	CG33547-PQ	283..449	836..989	174	32.2	Plus
Rim-PR	1941	CG33547-PR	283..449	836..989	174	32.2	Plus
Rim-PX	1955	CG33547-PX	283..449	836..989	174	32.2	Plus
Rim-PU	1955	CG33547-PU	283..449	836..989	174	32.2	Plus
Rim-PV	1965	CG33547-PV	283..449	836..989	174	32.2	Plus
Rim-PW	2595	CG33547-PW	283..449	836..989	174	32.2	Plus
Rim-PP	2792	CG33547-PP	283..449	836..989	174	32.2	Plus
Rim-PK	2798	CG33547-PK	283..449	836..989	174	32.2	Plus
Rim-PF	2798	CG33547-PF	283..449	836..989	174	32.2	Plus
Rim-PAA	1358	CG33547-PAA	282..450	799..962	168	32.2	Plus
Rim-PS	1399	CG33547-PS	282..450	799..962	168	32.2	Plus
Rim-PQ	1931	CG33547-PQ	282..450	799..962	168	32.2	Plus
Rim-PR	1941	CG33547-PR	282..450	799..962	168	32.2	Plus
Rim-PX	1955	CG33547-PX	282..450	799..962	168	32.2	Plus
Rim-PU	1955	CG33547-PU	282..450	799..962	168	32.2	Plus
Rim-PV	1965	CG33547-PV	282..450	799..962	168	32.2	Plus
Rim-PW	2595	CG33547-PW	282..450	799..962	168	32.2	Plus
Rim-PP	2792	CG33547-PP	282..450	799..962	168	32.2	Plus
Rim-PK	2798	CG33547-PK	282..450	799..962	168	32.2	Plus
Rim-PF	2798	CG33547-PF	282..450	799..962	168	32.2	Plus
CG10543-PD	1631	CG10543-PD	1355..1559	790..983	167	29.1	Plus
CG10543-PE	1634	CG10543-PE	1358..1562	790..983	167	29.1	Plus
CG10543-PA	1634	CG10543-PA	1358..1562	790..983	167	29.1	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 23:49:54

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI21666-PA	667	GI21666-PA	350..667	1054..1351	1044	70.3	Plus
Dmoj\GI21665-PA	168	GI21665-PA	1..137	1..108	297	53.1	Plus
Dmoj\GI10361-PA	595	GI10361-PA	237..480	1021..1283	208	26.4	Plus
Dmoj\GI13460-PA	552	GI13460-PA	416..505	1184..1274	198	39.6	Plus
Dmoj\GI21583-PA	1336	GI21583-PA	611..690	1194..1273	190	42.5	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 23:50:04

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL26817-PA	955	GL26817-PA	793..955	1189..1351	920	96.3	Plus
Dper\GL26817-PA	955	GL26817-PA	536..753	681..891	703	77.9	Plus
Dper\GL26816-PA	157	GL26816-PA	1..110	1..100	292	72.7	Plus
Dper\GL15695-PA	572	GL15695-PA	431..519	1185..1274	205	42.2	Plus
Dper\GL20491-PA	347	GL20491-PA	31..144	1190..1312	193	34.1	Plus
Dper\GL26812-PA	1328	GL26812-PA	633..712	1194..1273	193	42.5	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 23:50:18

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA22634-PA	1551	GA22634-PA	1135..1551	956..1351	1118	63.5	Plus
Dpse\GA22634-PA	1551	GA22634-PA	711..1099	681..1069	728	69.4	Plus
Dpse\GA26185-PA	1367	GA26185-PA	630..709	1194..1273	192	42.5	Plus
Dpse\GA16696-PA	568	GA16696-PA	396..515	1155..1274	175	38	Plus
Dpse\GA18481-PA	333	GA18481-PA	168..287	1183..1313	174	35.1	Plus
Dpse\GA23061-PA	507	GA23061-PA	134..220	1199..1286	171	38.6	Plus
Dpse\GA16696-PA	568	GA16696-PA	427..545	1185..1276	170	31.7	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 23:50:27

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM12381-PA	962	GM12381-PA	665..962	1056..1351	1241	87.9	Plus
Dsec\GM12381-PA	962	GM12381-PA	123..510	678..1073	914	87.9	Plus
Dsec\GM12379-PA	162	GM12379-PA	1..136	1..138	468	97.8	Plus
Dsec\GM12380-PA	114	GM12380-PA	14..108	189..283	258	95.8	Plus
Dsec\GM24598-PA	540	GM24598-PA	401..489	1185..1274	211	43.3	Plus
Dsec\GM17698-PA	434	GM17698-PA	272..356	1197..1282	187	40.7	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 23:50:34

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD24377-PA	243	GD24377-PA	1..224	1070..1291	1169	97.8	Plus
Dsim\GD16717-PA	149	GD16717-PA	1..139	1..141	424	90.8	Plus
Dsim\GD12667-PA	540	GD12667-PA	401..489	1185..1274	210	43.3	Plus
Dsim\GD22772-PA	392	GD22772-PA	223..311	1193..1282	184	37.8	Plus
Dsim\GD25683-PA	278	GD25683-PA	48..120	1199..1271	181	42.5	Plus
Dsim\GD22772-PA	392	GD22772-PA	101..311	1105..1317	169	25	Plus
Dsim\GD25683-PA	278	GD25683-PA	23..148	1146..1271	154	28.9	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 23:50:48

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\ovo-PA	1610	GJ15791-PA	1298..1610	1058..1351	1088	73.3	Plus
Dvir\ovo-PA	1610	GJ15791-PA	691..958	678..896	604	58.4	Plus
Dvir\ovo-PA	1610	GJ15791-PA	272..653	243..587	573	51.9	Plus
Dvir\GJ10213-PA	615	GJ10213-PA	302..502	1072..1283	210	27.6	Plus
Dvir\GJ11823-PA	559	GJ11823-PA	421..509	1185..1274	202	42.2	Plus
Dvir\GJ15805-PA	1342	GJ15805-PA	617..696	1194..1273	187	42.5	Plus
Dvir\GJ23994-PA	545	GJ23994-PA	147..289	1181..1298	181	32.2	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 23:51:02

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK10250-PA	1576	GK10250-PA	1..670	1..571	979	50.4	Plus
Dwil\GK10250-PA	1576	GK10250-PA	1396..1576	1172..1351	965	92.8	Plus
Dwil\GK10250-PA	1576	GK10250-PA	716..1060	678..1024	807	71.1	Plus
Dwil\GK25297-PA	1384	GK25297-PA	611..690	1194..1273	189	42.5	Plus
Dwil\GK25316-PA	531	GK25316-PA	152..238	1199..1286	167	38.6	Plus
Dwil\GK13799-PA	569	GK13799-PA	171..294	1197..1298	163	31.5	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 23:51:13

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE16381-PA	1451	GE16381-PA	1..851	1..902	2660	83	Plus
Dyak\GE16381-PA	1451	GE16381-PA	1074..1451	1011..1351	1218	73.3	Plus
Dyak\GE20069-PA	552	GE20069-PA	413..501	1185..1274	209	43.3	Plus
Dyak\GE25095-PA	274	GE25095-PA	117..242	1198..1334	183	31.4	Plus
Dyak\GE12313-PA	278	GE12313-PA	48..120	1199..1271	181	42.5	Plus
Dyak\GE14467-PA	502	GE14467-PA	205..311	1181..1297	175	32.2	Plus
Dyak\GE25095-PA	274	GE25095-PA	144..233	1197..1297	160	34.7	Plus
Dyak\GE12313-PA	278	GE12313-PA	23..148	1146..1271	154	28.9	Plus
Dyak\GE25095-PA	274	GE25095-PA	167..248	1192..1273	153	37.8	Plus

LD47350.hyp Sequence

Translation from 834 to 4889

> LD47350.hyp
MPKIFLIKNRLHQQQQRLLESQNLLQHKNQDDERLVPPLSPSGSGSGPSP
TPTSQPPPEPQGQGQQVLGQVPDSDQQPLSLTRKRFHHRRHYFGQSRHSL
DHLNQNQSPNPNANANPNQIQNPAELEVECATGQVQNENFAAELLQRLTP
NTATTAQNNIVNNLVNNSRAATSVLATKDCTIENSPISIPKNQRAEDEEE
QEDQEKEKPAEREREKSDERTEQVEKEERVEREEEEDDEVDVGVEAPRPR
FYNTGVVLTQAQRKEYPQEPKDLSLTIAKSSPASPHIHSDSESDSDSDGG
CKLIVDEKPPLPVIKPLSLRLRSTPPPADQRPSPPPPRDPAPAVRCSVIQ
RAPQSQLPTSRAGFLLPPLDQLGPEQQEPIDYHVPKRRSPSYDSDEELNA
RRLERARQVREARRRSTILAARVLLAQSQRLNPRLVRSLPGILAAAAGHG
RNSSSSSGAAGQGFQSSGFGSQNSGSGSSSGNQNAGSGAGSPGSGAGGGG
GMGGGRDGRGNYGPNSPPTGALPPFYESLKSGQQSTASNNTGQSPGANHS
HFNANPANFLQNAAAAAYIMSAGSGGGGCTGNGGGGASGPGGGPSANSGG
GGGGGGGNGYINCGGVGGPNNSLDGNNLLNFASVSNYNESNSKFHNHHHH
HQHNNNNNNNGGQTSMMGHPFYGGNPSAYGIILKDEPDIEYDEAKIDIGT
FAQNIIQATMGSSGQFNASAYEDAIMSDLASSGQCPNGAVDPLQFTATLM
LSSQTDHLLEQLSDAVDLSSFLQRSCVDDEESTSPRQDFELVSTPSLTPD
SVTPVEQHNTNTTQLDVLHENLLTQLTHNIVRGGSNQQQQHHQQHGVQQQ
QQQQHSVQQQQQHNVQQQHGVQQQHVQQQPPPSYQHATRGLMMQQQPQHG
GYQQQAAIMSQQQQQLLSQQQQQSHHQQQQQQQHAAAYQQHNIYAQQQQQ
QQQQHHQQQQQQQHHHFHHQQQQQPQPQSHHSHHHGHGHDNSNMSLPSPT
AAAAAAAAAAAAAAAAAAHLQRPMSSSSSSGGTNSSNSSGGSSNSPLLDA
NAAAAAAAALLDTKPLIQSLGLPPDLQLEFVNGGHGIKNPLAVENAHGGH
HRIRNIDCIDDLSKHGHHSQHQQQQGSPQQQNMQQSVQQQSVQQQQSLQQ
QQQQQHHQHHSNSSASSNASSHGSAEALCMGSSGGANEDSSSGNNKFVCR
VCMKTFSLQRLLNRHMKCHSDIKRYLCTFCGKGFNDTFDLKRHTRTHTGV
RPYKCNLCEKSFTQRCSLESHCQKVHSVQHQYAYKERRAKMYVCEECGHT
TCEPEVHYLHLKNNHPFSPALLKFYDKRHFKFTNSQFANNLLGQLPMPVH
N*

LD47350.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:54:12

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
ovo-PE	1351	CG6824-PE	1..1351	1..1351	7180	100	Plus
ovo-PB	1351	CG6824-PB	1..1351	1..1351	7180	100	Plus
ovo-PC	1222	CG6824-PC	9..1222	138..1351	6441	99.9	Plus
ovo-PD	1028	CG6824-PD	1..572	502..1073	3032	99.5	Plus
ovo-PA	975	CG6824-PA	1..519	502..1073	2635	89.9	Plus
ovo-PD	1028	CG6824-PD	440..1028	828..1351	1648	60.4	Plus

Library:	LD
Tissue Source:	Drosophila melanogaster embryo
Created by:	Ling Hong
Date Registered:	1997-12-04
Comments:	Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:	473
Well:	50
Vector:	pOT2
Associated Gene/Transcript	ovo-RB
Protein status:	LD47350.pep: gold
Preliminary Size:	5392
Sequenced Size:	5514

Clone LD47350 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

LD47350.complete Sequence

LD47350.complete Blast Records

LD47350.complete Sim4 Records

LD47350.pep Sequence

LD47350.pep Blast Records

LD47350.hyp Sequence

LD47350.hyp Blast Records