BDGP Sequence Production Resources |
Search the DGRC for LD47413
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 474 |
Well: | 13 |
Vector: | pOT2 |
Associated Gene/Transcript | CG32075-RA |
Protein status: | LD47413.pep: gold |
Preliminary Size: | 1948 |
Sequenced Size: | 1979 |
Gene | Date | Evidence |
---|---|---|
CG6316 | 2001-01-01 | Release 2 assignment |
CG32075 | 2001-11-30 | Blastp of sequenced clone |
CG32075 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32075 | 2008-04-29 | Release 5.5 accounting |
CG32075 | 2008-08-15 | Release 5.9 accounting |
CG32075 | 2008-12-18 | 5.12 accounting |
1979 bp (1979 high quality bases) assembled on 2001-11-30
GenBank Submission: AY069701
> LD47413.complete TAGCAAAATATTAAAAAAAACTTACTGAACCGACAAGGATTAGTAAAATA CATTAGGTTGGAAACCTTTGGCGAGTAAAATGTTTTTAAATTAAATTATT TATTCTGCCAACTCAAAACTTGTGTAAGGAATTCATTTTTATAGCTGCAT TTAGCTCATCACTGTTGCAACTGTTGTGATTTCGTTTGCGGTTTGTTTCG CATGGAATTTGTTTAAATTTATTCAGACCAAATTGCCATGGCTGTTGCAA AGAAGGAAAAATTTGAGGCAAAAAAGAAAAGCCCTGAAAAGGGAAAACAG CAGAAAGCCAAAGTTGTTCCTGTCACACCGCCACCAAATGTAAAACAACG AACTGTGGTCACTCCTTGGCGAGACACGCTGGAATTTAATACAACGTACA AATGGTTGTTTGGCAAGTCCAACACACCAGCCACATGGCGTCAAGCGCTC AGTAAAATCCGCATTTGGTGTCTGCGAAGAGGAAGTCTCTGCCCGGCAGC GGTTTTGGCCACATCGGTGCTTGTTCAGGCGCACTTGGAGGACCAGGAGG GCAGCGCCAAAATACAGGACACCTATGCCAGTGCCTTTACACGATTCTAC AACTTTATGTCCTCCATTATCCAGGGACACAACATGTCCAGCATGTATGA AACGGCCAAGGAACTGGGCCTCCAGTCGTTCATCGTTGATCTGCGCCACT TGTGCGCCCATGGACAGGAGCTGCCGCCTGTGGAGGTGCTGAGAAACACC TCGAATCATTGTCTGGAGTGGCTGCGCACCTACTACTGGTTGCCACACAT GGAAACCATGTCCAATTTGGATGCTGGCAAACTGCATCGCAAGGACAAGC TTAAGTTTGAAAAGGCTGTGACAGATCTTCTGGAGATCTACGATCTAACC CTGGAGTGCCATATCAAGGGGGCTGAGAAACTAAAGGCCATTAGCAAGCT AAAATCCAGTGGTGAATTCAATAAGATACGAGTCTACTCCTCCAGCAAGA AGGCGAAGACATCGAAAGAAATTCTGAGTGCTGTGTTAGGTGATCTAAGT GCGTTGGTCAAAAAGGAGTCATCATCGATGAAGGATCTGCTGGACATATA TACAAAATGCCTGCTTAAAATGAAATACTTCCTTGGCGTTGGCTTGGAAA TCGACGACAACGAGGATGTCATCATTGCAGCCACACAGGGACTCTTCCGT CTATTGGCCGTGCAGGGATATATCGAGAAGGTTTTTTTGGCCCTAGTTCA ACTGAGTGAAAACCAAAACGAGTCGGAGCAAAGGCGTCTGGGAGCCAGCT ACTGGGCAAAGAAAATGTTGGAAACATTTGGGATGCTGTTCCGTATGAAG CGCATGTACAAAGCCGAACTGGATTTGAACGATAAACTAAAACCAGCGGA CTTTGCCACCCTAAACACGGATAAAATTTCTAAGACAATGCGCAGTCTGT TAGTACACTCAAATGCCGATCTCTCGGTTACCCTTATTTTTGGCGACAAT CCCAAAAAGTCCAGGTCTTTGATTTTTGATCGTGATTTTATTATGCAGCG TGTTGATGCATTTAGCAATTACTCAGCGCCCATTCTAAAAGGATTATTAC CGCTCGCAGATCCTCCATACACCAAGACGCAAATTGAGGATTTAACTAAA CTCTGCGATGCACAGCTTGAAGAATTTTATGAAGAGGAAGCTATGGAAGA AGATAGCTCTTCAGAGGAGAGCAACAATCTAGACCGTTTGGAACGATTTT TGGAACAAGCAGCTCAAAGCAAAGAGCATACATCAGACTGGGGAGTTTGG AAATTAGACAAGCATACCGATTGGCCCAAATGTGCATTGGGTGTGCTCCC TTGGGCTCAATAAATACGCAGATTAATATTAAATAAAGTAATTAATAAAA ACTAGTACTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11054340..11055339 | 1377..378 | 4925 | 99.5 | Minus |
chr3L | 24539361 | chr3L | 11055398..11055775 | 378..1 | 1875 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 11053781..11054002 | 1813..1592 | 1095 | 99.5 | Minus |
chr3L | 24539361 | chr3L | 11054065..11054280 | 1592..1377 | 1080 | 100 | Minus |
chr3L | 24539361 | chr3L | 11053604..11053701 | 1911..1814 | 490 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11063462..11064461 | 1377..378 | 5000 | 100 | Minus |
3L | 28110227 | 3L | 11064520..11064897 | 378..1 | 1890 | 100 | Minus |
3L | 28110227 | 3L | 11062903..11063124 | 1813..1592 | 1110 | 100 | Minus |
3L | 28110227 | 3L | 11063187..11063402 | 1592..1377 | 1080 | 100 | Minus |
3L | 28110227 | 3L | 11062725..11062823 | 1912..1814 | 495 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11056562..11057561 | 1377..378 | 5000 | 100 | Minus |
3L | 28103327 | 3L | 11057620..11057997 | 378..1 | 1890 | 100 | Minus |
3L | 28103327 | 3L | 11056003..11056224 | 1813..1592 | 1110 | 100 | Minus |
3L | 28103327 | 3L | 11056287..11056502 | 1592..1377 | 1080 | 100 | Minus |
3L | 28103327 | 3L | 11055825..11055923 | 1912..1814 | 495 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
transib3 | 2883 | transib3 TRANSIB3 2883bp | 2652..2701 | 1859..1909 | 117 | 72.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11053648..11053701 | 1814..1867 | 100 | <- | Minus |
chr3L | 11053781..11054001 | 1593..1813 | 99 | <- | Minus |
chr3L | 11054065..11054279 | 1378..1592 | 100 | <- | Minus |
chr3L | 11054340..11055339 | 378..1377 | 99 | <- | Minus |
chr3L | 11055399..11055775 | 1..377 | 94 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32075-RA | 1..1626 | 238..1863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32075-RA | 1..1626 | 238..1863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32075-RA | 1..1626 | 238..1863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32075-RA | 1..1626 | 238..1863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32075-RA | 1..1626 | 238..1863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32075-RA | 41..1951 | 1..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32075-RA | 41..1951 | 1..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32075-RA | 45..1955 | 1..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32075-RA | 41..1951 | 1..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32075-RA | 45..1955 | 1..1911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11062726..11062823 | 1814..1911 | 100 | <- | Minus |
3L | 11062903..11063123 | 1593..1813 | 100 | <- | Minus |
3L | 11063187..11063401 | 1378..1592 | 100 | <- | Minus |
3L | 11063462..11064461 | 378..1377 | 100 | <- | Minus |
3L | 11064521..11064897 | 1..377 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11062726..11062823 | 1814..1911 | 100 | <- | Minus |
3L | 11062903..11063123 | 1593..1813 | 100 | <- | Minus |
3L | 11063187..11063401 | 1378..1592 | 100 | <- | Minus |
3L | 11063462..11064461 | 378..1377 | 100 | <- | Minus |
3L | 11064521..11064897 | 1..377 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11062726..11062823 | 1814..1911 | 100 | <- | Minus |
3L | 11062903..11063123 | 1593..1813 | 100 | <- | Minus |
3L | 11063187..11063401 | 1378..1592 | 100 | <- | Minus |
3L | 11063462..11064461 | 378..1377 | 100 | <- | Minus |
3L | 11064521..11064897 | 1..377 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11055826..11055923 | 1814..1911 | 100 | <- | Minus |
arm_3L | 11056003..11056223 | 1593..1813 | 100 | <- | Minus |
arm_3L | 11056287..11056501 | 1378..1592 | 100 | <- | Minus |
arm_3L | 11056562..11057561 | 378..1377 | 100 | <- | Minus |
arm_3L | 11057621..11057997 | 1..377 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11056003..11056223 | 1593..1813 | 100 | <- | Minus |
3L | 11056287..11056501 | 1378..1592 | 100 | <- | Minus |
3L | 11056562..11057561 | 378..1377 | 100 | <- | Minus |
3L | 11057621..11057997 | 1..377 | 100 | Minus | |
3L | 11055826..11055923 | 1814..1911 | 100 | <- | Minus |
Translation from 237 to 1862
> LD47413.pep MAVAKKEKFEAKKKSPEKGKQQKAKVVPVTPPPNVKQRTVVTPWRDTLEF NTTYKWLFGKSNTPATWRQALSKIRIWCLRRGSLCPAAVLATSVLVQAHL EDQEGSAKIQDTYASAFTRFYNFMSSIIQGHNMSSMYETAKELGLQSFIV DLRHLCAHGQELPPVEVLRNTSNHCLEWLRTYYWLPHMETMSNLDAGKLH RKDKLKFEKAVTDLLEIYDLTLECHIKGAEKLKAISKLKSSGEFNKIRVY SSSKKAKTSKEILSAVLGDLSALVKKESSSMKDLLDIYTKCLLKMKYFLG VGLEIDDNEDVIIAATQGLFRLLAVQGYIEKVFLALVQLSENQNESEQRR LGASYWAKKMLETFGMLFRMKRMYKAELDLNDKLKPADFATLNTDKISKT MRSLLVHSNADLSVTLIFGDNPKKSRSLIFDRDFIMQRVDAFSNYSAPIL KGLLPLADPPYTKTQIEDLTKLCDAQLEEFYEEEAMEEDSSSEESNNLDR LERFLEQAAQSKEHTSDWGVWKLDKHTDWPKCALGVLPWAQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23807-PA | 545 | GF23807-PA | 1..545 | 1..541 | 1869 | 64.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13947-PA | 541 | GG13947-PA | 1..541 | 1..541 | 2435 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16572-PA | 501 | GH16572-PA | 1..499 | 27..538 | 1680 | 60.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32075-PB | 541 | CG32075-PB | 1..541 | 1..541 | 2798 | 100 | Plus |
CG32075-PA | 541 | CG32075-PA | 1..541 | 1..541 | 2798 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13863-PA | 526 | GI13863-PA | 4..522 | 11..538 | 1671 | 59.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15742-PA | 381 | GL15742-PA | 2..381 | 70..452 | 1070 | 53 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16659-PA | 492 | GA16659-PA | 9..480 | 29..480 | 1220 | 49.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24782-PA | 537 | GM24782-PA | 22..537 | 22..541 | 2470 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12833-PA | 537 | GD12833-PA | 1..537 | 1..541 | 2466 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11724-PA | 527 | GJ11724-PA | 1..523 | 1..538 | 1707 | 58.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11450-PA | 537 | GK11450-PA | 25..537 | 31..539 | 1458 | 53 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20245-PA | 541 | GE20245-PA | 1..541 | 1..541 | 2468 | 86.3 | Plus |
Translation from 237 to 1862
> LD47413.hyp MAVAKKEKFEAKKKSPEKGKQQKAKVVPVTPPPNVKQRTVVTPWRDTLEF NTTYKWLFGKSNTPATWRQALSKIRIWCLRRGSLCPAAVLATSVLVQAHL EDQEGSAKIQDTYASAFTRFYNFMSSIIQGHNMSSMYETAKELGLQSFIV DLRHLCAHGQELPPVEVLRNTSNHCLEWLRTYYWLPHMETMSNLDAGKLH RKDKLKFEKAVTDLLEIYDLTLECHIKGAEKLKAISKLKSSGEFNKIRVY SSSKKAKTSKEILSAVLGDLSALVKKESSSMKDLLDIYTKCLLKMKYFLG VGLEIDDNEDVIIAATQGLFRLLAVQGYIEKVFLALVQLSENQNESEQRR LGASYWAKKMLETFGMLFRMKRMYKAELDLNDKLKPADFATLNTDKISKT MRSLLVHSNADLSVTLIFGDNPKKSRSLIFDRDFIMQRVDAFSNYSAPIL KGLLPLADPPYTKTQIEDLTKLCDAQLEEFYEEEAMEEDSSSEESNNLDR LERFLEQAAQSKEHTSDWGVWKLDKHTDWPKCALGVLPWAQ*