BDGP Sequence Production Resources |
Search the DGRC for LD47422
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 474 |
Well: | 22 |
Vector: | pOT2 |
Associated Gene/Transcript | Ctf4-RA |
Protein status: | LD47422.pep: gold |
Sequenced Size: | 2931 |
Gene | Date | Evidence |
---|---|---|
CG13350 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13350 | 2008-04-29 | Release 5.5 accounting |
CG13350 | 2008-08-15 | Release 5.9 accounting |
CG13350 | 2008-12-18 | 5.12 accounting |
2931 bp (2931 high quality bases) assembled on 2005-08-02
GenBank Submission: BT023774
> LD47422.complete CGAGAGATCAATTGAAATTAAGCATTAAATCACATCATGAGCTTCTTGCG CAGTGCCCTGCGCTATGCCCACACCAATGGCTACACGGGACTCCTTTACA CTCCGCGCGGCGAGTTCATCATCACGTGCGGCACAGATGGAGACATCCGG CACTGGACCTGCATTAGTGACGACGATCCACGCTCAAGTTGCCTGGGCGA GTTCGTCATGTGCATAGCCCACACGGGAACCCGTTTGCTGGCCTCGACGG ATCGGAATACGATCCATGCCTACACCTTTCCCGAGATGGACAGCGATGGC ATCCTCATGCGATTCACGGCACCGGCTACGTGCCTCAAGGTATCCGGTGG CTATACTGCTGCCGGCAGCGAGGATACCACTATAAAGGTGCTTAAGGGAG ATACAGCTGGCAACGAAACGGTGCTGGAGGGGCACACTGGTCCCATTCTG GCACTGGACTTGTTTGCGGAGCGAAAGCTGCTGGTTTCCGTGGCCGGGGA TGGCCAACTGAAGGTGTGGAACTTCGAGGAGGGCAAGGAGCTGAAGACCA TTGGGGGCTTGCCAAAGGTCAACAGTTTCGAGAGCGCCAGCCTGTATGGC ACTCCGCATTTCGAGCCACAAAGCGGTGAACTTCTGGCCTATGCCGTTGA CAACGAGATTGTGGTCCTCAACACGGCCAACTGGGAAGTGGCCTTTAAGC TGCGCGACGACTCGGTGTCCAGTAACTACAGCTGCTGCCAGTTCTCGCCC AATGGTGAGCGCCTGGCCGCCGGAACAACCAAGGGCGAGGTGAGCATCTT CGATGTAAAGAAACGGAAGGCAGTAACAGTGGAGATTCCGCCAAGCGACT GCAATGCCATAACATGCCTTGCCTGGAATCTGTCCGGAGAGGTGGAGGTG GCCTTCTGCGATGCCACTGGCCAGCTGGGAACCGTATTTCTTGGCGATGC AGTCGACACAGGCAACGGCGATGGATTGGTGGACGACCAAGCCGAGCTGT TGGGCGATGACTATGAGTTTGAGGCCGGCGATGACGTGGACACTGCAGCA GACGACGGCGATGGCGTTAGTCTGGAACAGCTTAAGCGCAAGGTGATGAA CTTTGCGGATCCCGTAGATCACGATGACGCCTCCAACCAATCCCTGGACA GCAGTAGCCGAACTGTACCTGCACCCGTTGCCCCGCAAATCAAGCTCTTC AAGCAGCAGACGGCCTTTCAGCCCAGTGCCACACCGGCCGATCTAGAGCA TCGCTACATGGCATGGAATGATGTGGGCATTGTTACCGCCCATGTGGAGC CCTCAGGCGATAGCTCCATCGATGTGGAGTTCCACGACGCTAGTATTCAC CACGCTCTACACATTAGTAACTACAATCAGCACAATTTGGCCAGTGTGAG CAGTGGAGCTTTGGCATTGGCCTCCAACGAATCCAGCAAGTTAGTAGTCA TTGCTCTGGCCGCCGCCGGAAACAAAGAGTGGTCACTCAGCCTCCCGGAT TGCGAGAGTGCAGAGGCTGTTGTGGCCACGCGATTTCTAGTGGCTGTGGC CACCAGCTCCAGTTTTCTGCGTATCTTCACCGTGATGGGTACACAGCGTG AGGTGCTAACCATACCAGGACCAATGGTGGCTATTGCTGGACACGAGCAC AGCCTAATGGTTGTTTACCACAGTTCCGCGCCCAGTCAGACGCAGCAGCA TCTCGCCGCGATGTTGGTGAACATAAATGGATTGAGTTTGCGACAAGAAT ATCTGCCCGTTCCGCTGACTCCAGGCCGGCAGCTCACCTGGTTTGGGTAC AGCGACACCGGATCGCCGAGTATTGCCGACAACATGGGTCTGCTGCAGTT GTATCGCCGGAGCAGCAACGCCTGGTTCCCCATCTGCGACACCATGAAGC AAAGCACCAGTGTGTCGCACAACTTCTTTGTGGTCGCTGTATCCGAGAAA CGTCAGATAGTCCAGGCGGTCCTGTGCCGCGGTACCTCCTATCCCATGAC CAATCCGCGTCCCATGCTCCAGGAACTGCGTATGCAGATCCCGCTCTGCG ACGTCGAAGTGGAAAAGTCCGAGCTGGAGGATGCACTGCTGCGGTCCAGT CTGATGCAAATGGATGGGGCAGAGAAGATGCAAAAGGAGACGGCCATCAA GCTGTTTGCATTGGCCTGCAGCAGCGAGTGCGAGACGCGAGCTAGGGAAT TGATCGAATCGATTGCCTGCACTGATCTGCTTCAACTGGCCGTGAAATAC GCCACGAAACGTGGACGCATCCACCTGTCCGACCGTCTGTGCGAACTGCT ACCTCAATTGGAGGCGGTCCAGGAGGCACGCAAGCAGCAGACTTTGTTGG GTGCCAGCGGCATTGCGGCCACCATTGTTCTGCCAATGACTCCCACATCG GCCTCACAAAGCGGCCCAAAACCCAAGGCCATCGAGCTGAGCTCGGCCAA ACGGGGCACCCTGAAGAGATTGGTCAATTCACCCAATATGTTTAAAGCAG CAGCAGCATCGGCAGCATCCCGGCCCTCGACTCCGGATATCACACCCTCT CCGCTGGACACCCAGGAAAACATATTCGGCGAATCGGAATCCGAGGTTCC CATGGGTAAAGCCACCGATCACCGGTCCCCTTTGAATTCGGTTAATCCCT TTGCTATGAAGCGCAAACTGGGCGACACTGGAGTCATCTTTGGATCCGAA AAGCTGAAGCTGGCAAAGAAATAGTCTGTTTGTAGATTGATAAGTAGGTT TAAGATAAATATATTATATAAATAATGTGTAACGTTTATCCCATTCTGTG AGCTACATGTAAAATAACAAATTTTTATTTGAGCTTTTTATGGAACAGAA TTGTTAAGGATTAATTTGCTTATTTAAATTTAAAGAATAAAATATACTTT TATTTATATTAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13350-RA | 3113 | CG13350-RA | 204..3113 | 1..2910 | 14550 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 9867676..9870585 | 2910..1 | 14460 | 99.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 13980358..13983271 | 2914..1 | 14570 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 13981557..13984470 | 2914..1 | 14570 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 9867719..9870585 | 1..2867 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13350-RA | 1..2688 | 37..2724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13350-RA | 1..2688 | 37..2724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ctf4-RA | 1..2688 | 37..2724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13350-RA | 1..2688 | 37..2724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ctf4-RA | 1..2688 | 37..2724 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13350-RA | 204..3110 | 1..2907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13350-RA | 204..3113 | 1..2910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ctf4-RA | 47..2956 | 1..2910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13350-RA | 204..3110 | 1..2907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ctf4-RA | 47..2956 | 1..2910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13980362..13983271 | 1..2910 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13980362..13983271 | 1..2910 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13980362..13983271 | 1..2910 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 9867867..9870776 | 1..2910 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13981561..13984470 | 1..2910 | 100 | Minus |
Translation from 36 to 2723
> LD47422.pep MSFLRSALRYAHTNGYTGLLYTPRGEFIITCGTDGDIRHWTCISDDDPRS SCLGEFVMCIAHTGTRLLASTDRNTIHAYTFPEMDSDGILMRFTAPATCL KVSGGYTAAGSEDTTIKVLKGDTAGNETVLEGHTGPILALDLFAERKLLV SVAGDGQLKVWNFEEGKELKTIGGLPKVNSFESASLYGTPHFEPQSGELL AYAVDNEIVVLNTANWEVAFKLRDDSVSSNYSCCQFSPNGERLAAGTTKG EVSIFDVKKRKAVTVEIPPSDCNAITCLAWNLSGEVEVAFCDATGQLGTV FLGDAVDTGNGDGLVDDQAELLGDDYEFEAGDDVDTAADDGDGVSLEQLK RKVMNFADPVDHDDASNQSLDSSSRTVPAPVAPQIKLFKQQTAFQPSATP ADLEHRYMAWNDVGIVTAHVEPSGDSSIDVEFHDASIHHALHISNYNQHN LASVSSGALALASNESSKLVVIALAAAGNKEWSLSLPDCESAEAVVATRF LVAVATSSSFLRIFTVMGTQREVLTIPGPMVAIAGHEHSLMVVYHSSAPS QTQQHLAAMLVNINGLSLRQEYLPVPLTPGRQLTWFGYSDTGSPSIADNM GLLQLYRRSSNAWFPICDTMKQSTSVSHNFFVVAVSEKRQIVQAVLCRGT SYPMTNPRPMLQELRMQIPLCDVEVEKSELEDALLRSSLMQMDGAEKMQK ETAIKLFALACSSECETRARELIESIACTDLLQLAVKYATKRGRIHLSDR LCELLPQLEAVQEARKQQTLLGASGIAATIVLPMTPTSASQSGPKPKAIE LSSAKRGTLKRLVNSPNMFKAAAASAASRPSTPDITPSPLDTQENIFGES ESEVPMGKATDHRSPLNSVNPFAMKRKLGDTGVIFGSEKLKLAKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11148-PA | 892 | GF11148-PA | 1..892 | 1..895 | 4123 | 85.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22452-PA | 893 | GG22452-PA | 1..893 | 1..895 | 4634 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22947-PA | 902 | GH22947-PA | 1..902 | 1..895 | 3589 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ctf4-PA | 895 | CG13350-PA | 1..895 | 1..895 | 4596 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18438-PA | 897 | GI18438-PA | 1..897 | 1..895 | 3611 | 76.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20084-PA | 886 | GL20084-PA | 1..886 | 1..895 | 3967 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12225-PA | 886 | GA12225-PA | 1..886 | 1..895 | 3953 | 82.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20238-PA | 893 | GM20238-PA | 1..893 | 1..895 | 4722 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25724-PA | 893 | GD25724-PA | 1..893 | 1..895 | 4723 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21522-PA | 899 | GJ21522-PA | 1..899 | 1..895 | 3703 | 76.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19526-PA | 899 | GK19526-PA | 1..899 | 1..895 | 3624 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13323-PA | 893 | GE13323-PA | 1..893 | 1..895 | 4551 | 96.1 | Plus |
Translation from 36 to 2723
> LD47422.hyp MSFLRSALRYAHTNGYTGLLYTPRGEFIITCGTDGDIRHWTCISDDDPRS SCLGEFVMCIAHTGTRLLASTDRNTIHAYTFPEMDSDGILMRFTAPATCL KVSGGYTAAGSEDTTIKVLKGDTAGNETVLEGHTGPILALDLFAERKLLV SVAGDGQLKVWNFEEGKELKTIGGLPKVNSFESASLYGTPHFEPQSGELL AYAVDNEIVVLNTANWEVAFKLRDDSVSSNYSCCQFSPNGERLAAGTTKG EVSIFDVKKRKAVTVEIPPSDCNAITCLAWNLSGEVEVAFCDATGQLGTV FLGDAVDTGNGDGLVDDQAELLGDDYEFEAGDDVDTAADDGDGVSLEQLK RKVMNFADPVDHDDASNQSLDSSSRTVPAPVAPQIKLFKQQTAFQPSATP ADLEHRYMAWNDVGIVTAHVEPSGDSSIDVEFHDASIHHALHISNYNQHN LASVSSGALALASNESSKLVVIALAAAGNKEWSLSLPDCESAEAVVATRF LVAVATSSSFLRIFTVMGTQREVLTIPGPMVAIAGHEHSLMVVYHSSAPS QTQQHLAAMLVNINGLSLRQEYLPVPLTPGRQLTWFGYSDTGSPSIADNM GLLQLYRRSSNAWFPICDTMKQSTSVSHNFFVVAVSEKRQIVQAVLCRGT SYPMTNPRPMLQELRMQIPLCDVEVEKSELEDALLRSSLMQMDGAEKMQK ETAIKLFALACSSECETRARELIESIACTDLLQLAVKYATKRGRIHLSDR LCELLPQLEAVQEARKQQTLLGASGIAATIVLPMTPTSASQSGPKPKAIE LSSAKRGTLKRLVNSPNMFKAAAASAASRPSTPDITPSPLDTQENIFGES ESEVPMGKATDHRSPLNSVNPFAMKRKLGDTGVIFGSEKLKLAKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ctf4-PA | 895 | CG13350-PA | 1..895 | 1..895 | 4596 | 100 | Plus |