BDGP Sequence Production Resources |
Search the DGRC for LD47425
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 474 |
Well: | 25 |
Vector: | pOT2 |
Associated Gene/Transcript | Fsn-RA |
Protein status: | LD47425.pep: gold |
Preliminary Size: | 1393 |
Sequenced Size: | 1278 |
Gene | Date | Evidence |
---|---|---|
CG4643 | 2001-01-01 | Release 2 assignment |
CG4643 | 2002-05-17 | Blastp of sequenced clone |
CG4643 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4643 | 2008-04-29 | Release 5.5 accounting |
CG4643 | 2008-08-15 | Release 5.9 accounting |
CG4643 | 2008-12-18 | 5.12 accounting |
1278 bp (1278 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118594
> LD47425.complete GCCAACGGTCACCCTGAATCGCAGAATATTAAAGTTTTCGAGTTTTATTT TTACCCATTTGGTTGGTGTGGGAAAATGACAATCAACAGGAACGGGTAAA TCCAAGCAGCTATCTACACGAGCCCAGCAGCGGAGCGCACACGCACACAA TGGTCGATCCGGTGGCGGCGCTGTGCAATTACAATGTGCTGGAGGTAATC TTCTCCTACCTGGAGCTGGACGACCTCAGTCATTGCTCGCAGGTGTGCAA AAGTTGGTACCACTTCCTCAACGACGAGAACAGCGACGTCTGGCGCTGGC ACTGCCTGAACAAGCTGCCCAAGGAGTCCCTCAAATCGGACCTGCTGGCC TCCGTCTCCACGTACAAGACGAAGCTGCGGGCCTATTTTCACGCCTGGAG CCCCAACGACTGTTCGAGGAATGTGTACATTAAGCCGAACGGATTCACCC TGCATCGCAATCCCGTGGCGCAGAGCACAGACGCGGCCCGGGGCAAGATA GGATTCCGCCACGGTCGTCACACCTGGGAGGTGATATGGGAGGGACCGCT GGGCACTGTGGCCGTCATCGGCATATCTACCAAGGAGGCGGCTCTACAGT GTCACGGCTATGTGGCTCTGCTCGGCTCCGACGACCAGAGCTGGGGCTGG AATCTGGTCGAGAACCACCTGCTGCACAACGGCGACATGCAGGGCAGTTA CCCGCTGCTGAACAATGCTCCCAAGTACCAAGTGGGCGAGCGGATACGCG TCATTCTCGACTGCGAGGACAACACCTTGTCGTTCGAGAAGAACTACGAG TTCCTCGGTGTGGCCTTCCGGGGCCTGCCGGACAAAAAGCTCTATCCCAC AGTATCCGCTGTCTACGGCAATACCGAGGTCTCGATGGTCTATCTGGGCA CGCCGTTGGACGGATAGCTTTGCAGAGGGCCTACAACTTGGTTAACAACT TCCACGGATCCATTAGGTTATTGTGTACATTTGTATTTATCTCAATTATG ATTGCTTCATTCCACCTGAAACTCAGTTCGATAAATTTAGTTAATAGTTT CGTTTTTTTGTACAAAATTATGCATTTTGTTGATTTACGCTAAGCCAAAG TTCATATCCACCTCGGCACTATCTCACATGGCAATTTACCTTAGTTATAC GAACCAAATGAATATAATAAGCGATTAAACAATAGTTGAAGCAATTTTTT ATACACCAATGATCGCTGATTGTGCAAGTAAAATTACAGACAGAAGAACG AGTCGCGAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 9109206..9109662 | 457..1 | 2285 | 100 | Minus |
chr2R | 21145070 | chr2R | 9108283..9108721 | 1260..822 | 2195 | 100 | Minus |
chr2R | 21145070 | chr2R | 9108783..9109149 | 823..457 | 1835 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 13221862..13222318 | 457..1 | 2285 | 100 | Minus |
2R | 25286936 | 2R | 13220934..13221377 | 1265..822 | 2205 | 99.8 | Minus |
2R | 25286936 | 2R | 13221439..13221805 | 823..457 | 1835 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 13223061..13223517 | 457..1 | 2285 | 100 | Minus |
2R | 25260384 | 2R | 13222133..13222576 | 1265..822 | 2205 | 99.7 | Minus |
2R | 25260384 | 2R | 13222638..13223004 | 823..457 | 1835 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 9108283..9108720 | 823..1260 | 100 | <- | Minus |
chr2R | 9108784..9109148 | 458..822 | 100 | <- | Minus |
chr2R | 9109206..9109662 | 1..457 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4643-RA | 1..768 | 150..917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fsn-RA | 1..768 | 150..917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fsn-RB | 1..768 | 150..917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4643-RA | 1..768 | 150..917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fsn-RB | 1..768 | 150..917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4643-RB | 20..1279 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fsn-RB | 20..1279 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fsn-RB | 21..1280 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4643-RB | 20..1279 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fsn-RB | 21..1280 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13220939..13221376 | 823..1260 | 100 | <- | Minus |
2R | 13221440..13221804 | 458..822 | 100 | <- | Minus |
2R | 13221862..13222318 | 1..457 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13220939..13221376 | 823..1260 | 100 | <- | Minus |
2R | 13221440..13221804 | 458..822 | 100 | <- | Minus |
2R | 13221862..13222318 | 1..457 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13220939..13221376 | 823..1260 | 100 | <- | Minus |
2R | 13221440..13221804 | 458..822 | 100 | <- | Minus |
2R | 13221862..13222318 | 1..457 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 9108444..9108881 | 823..1260 | 100 | <- | Minus |
arm_2R | 9108945..9109309 | 458..822 | 100 | <- | Minus |
arm_2R | 9109367..9109823 | 1..457 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13222138..13222575 | 823..1260 | 100 | <- | Minus |
2R | 13222639..13223003 | 458..822 | 100 | <- | Minus |
2R | 13223061..13223517 | 1..457 | 100 | Minus |
Translation from 149 to 916
> LD47425.pep MVDPVAALCNYNVLEVIFSYLELDDLSHCSQVCKSWYHFLNDENSDVWRW HCLNKLPKESLKSDLLASVSTYKTKLRAYFHAWSPNDCSRNVYIKPNGFT LHRNPVAQSTDAARGKIGFRHGRHTWEVIWEGPLGTVAVIGISTKEAALQ CHGYVALLGSDDQSWGWNLVENHLLHNGDMQGSYPLLNNAPKYQVGERIR VILDCEDNTLSFEKNYEFLGVAFRGLPDKKLYPTVSAVYGNTEVSMVYLG TPLDG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12960-PA | 255 | GF12960-PA | 1..255 | 1..255 | 1334 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22511-PA | 255 | GG22511-PA | 1..255 | 1..255 | 1363 | 98.8 | Plus |
Dere\GG23140-PA | 349 | GG23140-PA | 126..300 | 81..250 | 389 | 46.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21169-PA | 252 | GH21169-PA | 1..252 | 1..255 | 1285 | 93.3 | Plus |
Dgri\GH13013-PA | 349 | GH13013-PA | 126..300 | 81..250 | 387 | 45.1 | Plus |
Dgri\GH11484-PA | 283 | GH11484-PA | 51..215 | 82..246 | 161 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fsn-PA | 255 | CG4643-PA | 1..255 | 1..255 | 1395 | 100 | Plus |
Fsn-PB | 255 | CG4643-PB | 1..255 | 1..255 | 1395 | 100 | Plus |
gus-PM | 279 | CG2944-PM | 56..230 | 81..250 | 394 | 45.7 | Plus |
gus-PL | 279 | CG2944-PL | 56..230 | 81..250 | 394 | 45.7 | Plus |
gus-PK | 279 | CG2944-PK | 56..230 | 81..250 | 394 | 45.7 | Plus |
gus-PJ | 279 | CG2944-PJ | 56..230 | 81..250 | 394 | 45.7 | Plus |
gus-PI | 279 | CG2944-PI | 56..230 | 81..250 | 394 | 45.7 | Plus |
gus-PH | 279 | CG2944-PH | 56..230 | 81..250 | 394 | 45.7 | Plus |
gus-PG | 279 | CG2944-PG | 56..230 | 81..250 | 394 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18764-PA | 252 | GI18764-PA | 1..252 | 1..255 | 1280 | 93.3 | Plus |
Dmoj\GI18267-PA | 349 | GI18267-PA | 126..300 | 81..250 | 390 | 45.1 | Plus |
Dmoj\GI16979-PA | 316 | GI16979-PA | 85..249 | 82..246 | 160 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10506-PA | 255 | GL10506-PA | 1..255 | 1..255 | 1262 | 90.6 | Plus |
Dper\GL15433-PA | 349 | GL15433-PA | 126..300 | 81..250 | 393 | 46.3 | Plus |
Dper\GL26545-PA | 292 | GL26545-PA | 65..229 | 82..246 | 168 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18323-PA | 255 | GA18323-PA | 1..255 | 1..255 | 1262 | 90.6 | Plus |
Dpse\GA23998-PA | 349 | GA23998-PA | 126..300 | 81..250 | 393 | 46.3 | Plus |
Dpse\GA12721-PA | 292 | GA12721-PA | 65..229 | 82..246 | 168 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20297-PA | 255 | GM20297-PA | 1..255 | 1..255 | 1362 | 99.2 | Plus |
Dsec\GM26734-PA | 349 | GM26734-PA | 126..300 | 81..250 | 387 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25778-PA | 245 | GD25778-PA | 1..245 | 1..255 | 1294 | 95.7 | Plus |
Dsim\GD16681-PA | 349 | GD16681-PA | 126..300 | 81..250 | 387 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21788-PA | 252 | GJ21788-PA | 1..252 | 1..255 | 1290 | 94.5 | Plus |
Dvir\GJ21895-PA | 349 | GJ21895-PA | 126..300 | 81..250 | 387 | 44.6 | Plus |
Dvir\GJ17226-PA | 299 | GJ17226-PA | 67..231 | 82..246 | 155 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22006-PA | 255 | GK22006-PA | 1..255 | 1..255 | 1312 | 94.1 | Plus |
Dwil\GK14868-PA | 349 | GK14868-PA | 126..300 | 81..250 | 375 | 44.6 | Plus |
Dwil\GK24858-PA | 301 | GK24858-PA | 74..235 | 82..246 | 176 | 31 | Plus |
Translation from 149 to 916
> LD47425.hyp MVDPVAALCNYNVLEVIFSYLELDDLSHCSQVCKSWYHFLNDENSDVWRW HCLNKLPKESLKSDLLASVSTYKTKLRAYFHAWSPNDCSRNVYIKPNGFT LHRNPVAQSTDAARGKIGFRHGRHTWEVIWEGPLGTVAVIGISTKEAALQ CHGYVALLGSDDQSWGWNLVENHLLHNGDMQGSYPLLNNAPKYQVGERIR VILDCEDNTLSFEKNYEFLGVAFRGLPDKKLYPTVSAVYGNTEVSMVYLG TPLDG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fsn-PA | 255 | CG4643-PA | 1..255 | 1..255 | 1395 | 100 | Plus |
Fsn-PB | 255 | CG4643-PB | 1..255 | 1..255 | 1395 | 100 | Plus |
gus-PM | 279 | CG2944-PM | 56..230 | 81..250 | 394 | 45.7 | Plus |
gus-PL | 279 | CG2944-PL | 56..230 | 81..250 | 394 | 45.7 | Plus |
gus-PK | 279 | CG2944-PK | 56..230 | 81..250 | 394 | 45.7 | Plus |