BDGP Sequence Production Resources |
Search the DGRC for LD47477
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 474 |
Well: | 77 |
Vector: | pOT2 |
Associated Gene/Transcript | dgt5-RA |
Protein status: | LD47477.pep: gold |
Preliminary Size: | 2331 |
Sequenced Size: | 2207 |
Gene | Date | Evidence |
---|---|---|
CG8828 | 2001-07-04 | Blastp of sequenced clone |
CG8828 | 2003-01-01 | Sim4 clustering to Release 3 |
dgt5 | 2008-04-29 | Release 5.5 accounting |
dgt5 | 2008-08-15 | Release 5.9 accounting |
dgt5 | 2008-12-18 | 5.12 accounting |
2207 bp (2207 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052018
> LD47477.complete AATGGCTGGTTCAAACGACTGCGCCTTTTTGCGAAAAATTTAATTAGTTG CAAATCATGGCATACCAGGAGAAAATAACAGAATTTAAGAACTGGGCCAC TAATCTTGGCTGCCCGCCCACTGCCCTGCCCACCGATGATGCACTCCGAA GAATTTTTAAGTCCGGCTCCAGTTTACTTTTGAACCAGCTGCAATCCCGC ATCCAGCCGGTGGATTACGTGCGGGAGGTGCGCGAGAACCTGCTGATTGC CCAAGTGGCTCGCTACAAGGACAAAATGGTGCCGCTGGCCTCTAGGAGTT TCCAGCCACCGGAGCTCCAGAGGTACCAAAAAATACAGGAGCTAAAGAAG CACAAGGAGAAGGCGAACCAACAGCTTACGGAGGCCCGAAAAGAGTACCA AAAGCTATCTGCCGGCATCAAGACCAAGAACATTCAAACCATCAGTGCTG AGAACCGGAAGCAACTACTTGAATCCAAATGCAATATCCTTGACCTGAAG CTGGAGTCGCTGAATAAGAACTACGACCAGGAGTTGAAGAACAAGATCCA AATCTTGGGCACCACGCCCGTGAAGCTGAGTGCTAGAAATGCCAGCGAGG CGCAGGCAACAAGGGCTGTGGAGCAGGCTCTCAAGCAGCTGGAGACCTTC TATGGAATGTGTGACGATGGCAATGCGGTGAACAATTTAGCCGAGGCCAA GCAGCGATTATGGGATCAGATGCGGAGCACCTTTGCGGATATTCCCAACT CCCTGCTTCTGAACGTGGTAATGAAGATCAAAGAGGAGCAGCTGCAGCAC ATCATGAAGCTGAATGAATCCAGAGGCGAATGCACAAATGATAAGCCACC GCTGAATAACTATGAGGTCAAGTTACTAAAGACCAAGGCCGATATGCTGG GTCTGGCGGCCAAATATTTCGCGGCCCAAAAGGAGCTGGAACTGAAGGAG GAACGCTTTTGCCAAGACTACAGCGTCTTTGTGGACAAACTGCAATCAAA GGTATACAGATTTAATGGCATAAGTTTGGGCGACGAGGAAAATGCGGATG AACTGATTAGCGACTATCTGGTGCAGTACAACATGCGCAATTTTAATCGC TCCCAAAACGAATTCCTTCGTGAGCAGATTGAGCAACTGCGTCTGGAGCT AGATGCGGGCGCCAAGCAGCTGGAGAATCACGATCTAAAGCTAGGCTCTG TGAAACAAGTATACGGCGACATTAACTCCAGCATCAATCGCATCCAGCAA GATATGGTGCAGCTGTCACAGATCAAGGAGAAGATCCTGTTTTCGCGAAA TATGATGAAGAACCTGCTGGACGATATGCAAGCGGCCACACAGAAACAAA ACGCCAAGTCCCAGCTGATGAGCACTAAGCTAAAAGTCAGCAATATGTCC ATGTTGGGTGCGGAGAGTTTTTGCCTGGCCAATGATAGTGTGTTCTCCAG CACCAAGGTGGAGTTCGATGGCAACTGCAGCGCAATAAACTCAACGATGC GTCGCAGTTTTGACAACAAAACGCTAGTGCCGGGCGGAGCAGCATCTACC ACACTGATGGCTGCATCCGGAGCCACGCTACCATCGCATTTGCTGGAATT CAATACATTTTTGGAAATACCGCTGGAAAAATTTAGCTGTACGCCGCGCG CCTGCTCCTTCCTGTTGTCGGCCAATCCACTCATCGTCGAGGCCCAGGAG TTGGCCTCCACCGTTCAACTGGCACCAGGCTATTTGCTAACACCCTTCGG CGCTCTGCAGGAAGTCCGAAAACGCATTTTGTGGGCGTCAGCAATTGCCG CACACACGTCTGAGTTGAAATTGAATTTGCAGCCGTTAATTGTTGATCCG CACGATTTGAGACTGAAGGCGAGTCGTCAGCACGAGGAAATTGACCAATT GCTGGACAACCTGATGGCCATTGGGGTGAAGACTCAGTTGCAGCTGGAAA AGGCCGAGCGCATCTATCAGTTCCTGCTTGAGAATCCATTGCGACGCTAC GTTCCACCCAGTAAACGATACAACAATGGCAGTTTCGCGGACTACGAGTC CGAATTCAATCTCTACTATCGCATGACCACCAATGGAAGTTCGATGCGAG CGCCACCTAATTAAGTACGTTATTTGTGTTGTGAATACTGTAGCCCTTTT CAATTTTAAATTATATGAATATCCTGTACTGTTAGAATGAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dgt5-RA | 2307 | dgt5-RA | 112..2306 | 1..2195 | 10975 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 8353631..8354855 | 1654..430 | 6050 | 99.6 | Minus |
chr2R | 21145070 | chr2R | 8352964..8353311 | 2189..1842 | 1665 | 98.6 | Minus |
chr2R | 21145070 | chr2R | 8354919..8355198 | 429..150 | 1400 | 100 | Minus |
chr2R | 21145070 | chr2R | 8353377..8353565 | 1842..1654 | 930 | 99.5 | Minus |
chr2R | 21145070 | chr2R | 8355263..8355413 | 151..1 | 740 | 99.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 12466345..12467569 | 1654..430 | 6125 | 100 | Minus |
2R | 25286936 | 2R | 12465672..12466025 | 2195..1842 | 1770 | 100 | Minus |
2R | 25286936 | 2R | 12467633..12467912 | 429..150 | 1400 | 100 | Minus |
2R | 25286936 | 2R | 12466091..12466279 | 1842..1654 | 945 | 100 | Minus |
2R | 25286936 | 2R | 12467978..12468128 | 151..1 | 755 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12467544..12468768 | 1654..430 | 6125 | 100 | Minus |
2R | 25260384 | 2R | 12466871..12467224 | 2195..1842 | 1770 | 100 | Minus |
2R | 25260384 | 2R | 12468832..12469111 | 429..150 | 1400 | 100 | Minus |
2R | 25260384 | 2R | 12467290..12467478 | 1842..1654 | 945 | 100 | Minus |
2R | 25260384 | 2R | 12469177..12469327 | 151..1 | 755 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 8352964..8353310 | 1843..2189 | 98 | <- | Minus |
chr2R | 8353377..8353564 | 1655..1842 | 99 | <- | Minus |
chr2R | 8353631..8354855 | 430..1654 | 99 | <- | Minus |
chr2R | 8354919..8355196 | 152..429 | 100 | <- | Minus |
chr2R | 8355263..8355413 | 1..151 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt5-RA | 1..2058 | 57..2114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt5-RA | 1..2058 | 57..2114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt5-RA | 1..2058 | 57..2114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt5-RA | 1..2058 | 57..2114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt5-RA | 1..2058 | 57..2114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt5-RA | 112..2300 | 1..2189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt5-RA | 112..2300 | 1..2189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt5-RA | 112..2300 | 1..2189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt5-RA | 112..2300 | 1..2189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgt5-RA | 112..2300 | 1..2189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12465678..12466024 | 1843..2189 | 100 | <- | Minus |
2R | 12466091..12466278 | 1655..1842 | 100 | <- | Minus |
2R | 12466345..12467569 | 430..1654 | 100 | <- | Minus |
2R | 12467633..12467910 | 152..429 | 100 | <- | Minus |
2R | 12467978..12468128 | 1..151 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12465678..12466024 | 1843..2189 | 100 | <- | Minus |
2R | 12466091..12466278 | 1655..1842 | 100 | <- | Minus |
2R | 12466345..12467569 | 430..1654 | 100 | <- | Minus |
2R | 12467633..12467910 | 152..429 | 100 | <- | Minus |
2R | 12467978..12468128 | 1..151 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12465678..12466024 | 1843..2189 | 100 | <- | Minus |
2R | 12466091..12466278 | 1655..1842 | 100 | <- | Minus |
2R | 12466345..12467569 | 430..1654 | 100 | <- | Minus |
2R | 12467633..12467910 | 152..429 | 100 | <- | Minus |
2R | 12467978..12468128 | 1..151 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 8355483..8355633 | 1..151 | 100 | Minus | |
arm_2R | 8353183..8353529 | 1843..2189 | 100 | <- | Minus |
arm_2R | 8353596..8353783 | 1655..1842 | 100 | <- | Minus |
arm_2R | 8353850..8355074 | 430..1654 | 100 | <- | Minus |
arm_2R | 8355138..8355415 | 152..429 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12467290..12467477 | 1655..1842 | 100 | <- | Minus |
2R | 12466877..12467223 | 1843..2189 | 100 | <- | Minus |
2R | 12467544..12468768 | 430..1654 | 100 | <- | Minus |
2R | 12468832..12469109 | 152..429 | 100 | <- | Minus |
2R | 12469177..12469327 | 1..151 | 100 | Minus |
Translation from 56 to 2113
> LD47477.pep MAYQEKITEFKNWATNLGCPPTALPTDDALRRIFKSGSSLLLNQLQSRIQ PVDYVREVRENLLIAQVARYKDKMVPLASRSFQPPELQRYQKIQELKKHK EKANQQLTEARKEYQKLSAGIKTKNIQTISAENRKQLLESKCNILDLKLE SLNKNYDQELKNKIQILGTTPVKLSARNASEAQATRAVEQALKQLETFYG MCDDGNAVNNLAEAKQRLWDQMRSTFADIPNSLLLNVVMKIKEEQLQHIM KLNESRGECTNDKPPLNNYEVKLLKTKADMLGLAAKYFAAQKELELKEER FCQDYSVFVDKLQSKVYRFNGISLGDEENADELISDYLVQYNMRNFNRSQ NEFLREQIEQLRLELDAGAKQLENHDLKLGSVKQVYGDINSSINRIQQDM VQLSQIKEKILFSRNMMKNLLDDMQAATQKQNAKSQLMSTKLKVSNMSML GAESFCLANDSVFSSTKVEFDGNCSAINSTMRRSFDNKTLVPGGAASTTL MAASGATLPSHLLEFNTFLEIPLEKFSCTPRACSFLLSANPLIVEAQELA STVQLAPGYLLTPFGALQEVRKRILWASAIAAHTSELKLNLQPLIVDPHD LRLKASRQHEEIDQLLDNLMAIGVKTQLQLEKAERIYQFLLENPLRRYVP PSKRYNNGSFADYESEFNLYYRMTTNGSSMRAPPN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12450-PA | 687 | GF12450-PA | 1..685 | 1..685 | 2927 | 79.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22576-PA | 684 | GG22576-PA | 1..684 | 1..685 | 3396 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19917-PA | 688 | GH19917-PA | 1..688 | 1..682 | 2119 | 59.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dgt5-PB | 685 | CG8828-PB | 1..685 | 1..685 | 3464 | 100 | Plus |
dgt5-PA | 685 | CG8828-PA | 1..685 | 1..685 | 3464 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19874-PA | 689 | GI19874-PA | 1..689 | 1..682 | 2129 | 61.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17348-PA | 673 | GL17348-PA | 1..671 | 1..682 | 2349 | 66.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21351-PA | 678 | GA21351-PA | 1..676 | 1..682 | 2393 | 67 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20358-PA | 645 | GM20358-PA | 1..645 | 1..685 | 3115 | 88.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25837-PA | 685 | GD25837-PA | 1..685 | 1..685 | 3592 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15044-PA | 695 | GJ15044-PA | 1..695 | 1..682 | 2348 | 63.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22108-PA | 672 | GK22108-PA | 1..669 | 1..678 | 2182 | 60.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13445-PA | 685 | GE13445-PA | 1..685 | 1..685 | 3415 | 92.6 | Plus |
Translation from 56 to 2113
> LD47477.hyp MAYQEKITEFKNWATNLGCPPTALPTDDALRRIFKSGSSLLLNQLQSRIQ PVDYVREVRENLLIAQVARYKDKMVPLASRSFQPPELQRYQKIQELKKHK EKANQQLTEARKEYQKLSAGIKTKNIQTISAENRKQLLESKCNILDLKLE SLNKNYDQELKNKIQILGTTPVKLSARNASEAQATRAVEQALKQLETFYG MCDDGNAVNNLAEAKQRLWDQMRSTFADIPNSLLLNVVMKIKEEQLQHIM KLNESRGECTNDKPPLNNYEVKLLKTKADMLGLAAKYFAAQKELELKEER FCQDYSVFVDKLQSKVYRFNGISLGDEENADELISDYLVQYNMRNFNRSQ NEFLREQIEQLRLELDAGAKQLENHDLKLGSVKQVYGDINSSINRIQQDM VQLSQIKEKILFSRNMMKNLLDDMQAATQKQNAKSQLMSTKLKVSNMSML GAESFCLANDSVFSSTKVEFDGNCSAINSTMRRSFDNKTLVPGGAASTTL MAASGATLPSHLLEFNTFLEIPLEKFSCTPRACSFLLSANPLIVEAQELA STVQLAPGYLLTPFGALQEVRKRILWASAIAAHTSELKLNLQPLIVDPHD LRLKASRQHEEIDQLLDNLMAIGVKTQLQLEKAERIYQFLLENPLRRYVP PSKRYNNGSFADYESEFNLYYRMTTNGSSMRAPPN*