BDGP Sequence Production Resources |
Search the DGRC for LD47479
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 474 |
Well: | 79 |
Vector: | pOT2 |
Associated Gene/Transcript | Gem2-RA |
Protein status: | LD47479.pep: gold |
Preliminary Size: | 1330 |
Sequenced Size: | 1181 |
Gene | Date | Evidence |
---|---|---|
CG10419 | 2001-01-01 | Release 2 assignment |
CG10419 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10419 | 2003-01-15 | Blastp of sequenced clone |
CG10419 | 2008-04-29 | Release 5.5 accounting |
CG10419 | 2008-08-15 | Release 5.9 accounting |
CG10419 | 2008-12-18 | 5.12 accounting |
1181 bp (1181 high quality bases) assembled on 2003-01-15
GenBank Submission: AY069703
> LD47479.complete CACTGCTTGGCGGCTTTGAGTTTGCACGACTAATTCAACACAAATTTATT AAATACAGTGTAAACATGCAGCATGAGCCCGAAGATCAGACTTTTCAACT CCAGGCACTGGAGATCTGTGAGCCGGATAGCAGTTTTGACCCCCAGAAGC CGCCAGAGTCCGGGGAAGAGTACCTAATGCACATGTTCTACGAGAGGAAG CGATGTCCAGCTGTGGTGACCAAAAGATCATCCAAAATCAGGAATAACAC GGGAAATACCACTTTAGAGATGTTGGACAATCCCGAGTTGCCTCCGTTCA AGTGCCTGCTGCCCACGCCCGAATGGCGGGATGAGCAAGTTAAATCCTTC CAAGCAGCCCGCTCCCAGGTCCTAGTTCTTCGTAAGGAGTTGGCCAACAA CAACTACGACCAGTCCGGGGAACCACCTTTGACTTCCGACCAGGAGAAAT GGAAGGAATTCTGCCGGAATCAGCAGCCCCTCCTGAGCACCCTGCTCCAT TTGACCCAAAACGACTTGGAGCTCTTGCTGGAAATGCTCAGCAAGTGGCT GCAGGATCCCAACACCACGGTAGACCTTCTCCACGATGTCTGGCTGGCTC GCTGGCTGTATGCCACCTTGGTCTGCCTCCACCTTCCACTGGAACCTCAC GTGTTCAGCACCCTTCGATACATCGCCCGAACCTGCATCCATCTGAGAAA TCAACTTAAGGAGGACGAAGTGCAACGGGCAGCTCCCTACAACCTACTAC TAACGCTCACCGTTCAGGTTTTCGCACAGAATGATTTCAAGGATTACATA TAGGTATCATATTCCCAGTTTAGAAACCACTAATTTAAGCGCAAATTCGA CTATTTTGTTAACTAAAAAGCCAAAAGCTACGCTGGTAATTTTGTTTATA TAATTACTCTACGTTTAGATACTATTTTTATAGTTTTCTGTGGCTGAATT ATATTCTTTTGGTTAGAAAACAGATTTATTTATGCATATCAATCAAGAGA CAACATATTGTTAATGAACCTAAAAATTAGATCGTAAAACATAAAAGTTT AAATATAAAAGTAATGATAATATCTTAATTTGAATGAAGAAGTTACCCAT TTAACCCATGTACACAAGTCAATTATTTCTGGAAAATGTACTGAAATGTG ACCATTTATTGAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 19088687..19089566 | 282..1161 | 100 | <- | Minus |
chr3L | 19089618..19089898 | 1..281 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10419-RA | 1..738 | 66..803 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gem2-RA | 1..738 | 66..803 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gem2-RA | 1..738 | 66..803 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10419-RA | 1..738 | 66..803 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gem2-RA | 1..738 | 66..803 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10419-RA | 1..1161 | 1..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gem2-RA | 1..1161 | 1..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gem2-RA | 22..1182 | 1..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10419-RA | 1..1161 | 1..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gem2-RA | 22..1182 | 1..1161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19099123..19100002 | 282..1161 | 100 | <- | Minus |
3L | 19100054..19100334 | 1..281 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19099123..19100002 | 282..1161 | 100 | <- | Minus |
3L | 19100054..19100334 | 1..281 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19099123..19100002 | 282..1161 | 100 | <- | Minus |
3L | 19100054..19100334 | 1..281 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 19092223..19093102 | 282..1161 | 100 | <- | Minus |
arm_3L | 19093154..19093434 | 1..281 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19092223..19093102 | 282..1161 | 100 | <- | Minus |
3L | 19093154..19093434 | 1..281 | 100 | Minus |
Translation from 2 to 802
> LD47479.hyp LLGGFEFARLIQHKFIKYSVNMQHEPEDQTFQLQALEICEPDSSFDPQKP PESGEEYLMHMFYERKRCPAVVTKRSSKIRNNTGNTTLEMLDNPELPPFK CLLPTPEWRDEQVKSFQAARSQVLVLRKELANNNYDQSGEPPLTSDQEKW KEFCRNQQPLLSTLLHLTQNDLELLLEMLSKWLQDPNTTVDLLHDVWLAR WLYATLVCLHLPLEPHVFSTLRYIARTCIHLRNQLKEDEVQRAAPYNLLL TLTVQVFAQNDFKDYI*
Translation from 65 to 802
> LD47479.pep MQHEPEDQTFQLQALEICEPDSSFDPQKPPESGEEYLMHMFYERKRCPAV VTKRSSKIRNNTGNTTLEMLDNPELPPFKCLLPTPEWRDEQVKSFQAARS QVLVLRKELANNNYDQSGEPPLTSDQEKWKEFCRNQQPLLSTLLHLTQND LELLLEMLSKWLQDPNTTVDLLHDVWLARWLYATLVCLHLPLEPHVFSTL RYIARTCIHLRNQLKEDEVQRAAPYNLLLTLTVQVFAQNDFKDYI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10782-PA | 245 | GF10782-PA | 1..245 | 1..245 | 974 | 73.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13425-PA | 245 | GG13425-PA | 1..245 | 1..245 | 1211 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16947-PA | 247 | GH16947-PA | 1..247 | 1..245 | 910 | 68.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gem2-PB | 245 | CG10419-PB | 1..245 | 1..245 | 1311 | 100 | Plus |
Gem2-PA | 245 | CG10419-PA | 1..245 | 1..245 | 1311 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11807-PA | 258 | GI11807-PA | 1..258 | 1..245 | 895 | 67.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21755-PA | 245 | GL21755-PA | 1..245 | 1..245 | 862 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10306-PA | 245 | GA10306-PA | 1..245 | 1..245 | 867 | 70.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14892-PA | 245 | GM14892-PA | 1..245 | 1..245 | 1259 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12302-PA | 245 | GD12302-PA | 1..245 | 1..245 | 1281 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13510-PA | 260 | GJ13510-PA | 1..260 | 1..245 | 848 | 65.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12484-PA | 268 | GK12484-PA | 5..262 | 4..245 | 826 | 62.9 | Plus |