BDGP Sequence Production Resources |
Search the DGRC for LD47508
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 475 |
Well: | 8 |
Vector: | pOT2 |
Associated Gene/Transcript | GILT1-RA |
Protein status: | LD47508.pep: gold |
Preliminary Size: | 1268 |
Sequenced Size: | 1131 |
Gene | Date | Evidence |
---|---|---|
CG9796 | 2001-01-01 | Release 2 assignment |
CG9796 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9796 | 2003-03-19 | Blastp of sequenced clone |
CG9796 | 2008-04-29 | Release 5.5 accounting |
CG9796 | 2008-08-15 | Release 5.9 accounting |
CG9796 | 2008-12-18 | 5.12 accounting |
1131 bp (1131 high quality bases) assembled on 2003-03-19
GenBank Submission: AY061519
> LD47508.complete CCACCGAACCGCTAACAACACGACCGCCGTTCGTTACGTGCTGGCTATAT AACTGCATTTATAAGAAATTCTGAAGAACGAGAAGCCTGAAGATGAGTCA CAAAATCGCCGCTGTGTGCCTCTTGATGAGCTGCCTGATTGCCACGGCTT ATAGTGCCGCTAAGGTGCCAATTTCTATCTACTACGAGTCCCTGTGCCCG GACAGCGCCAAGTTCATTACGGAGCAGGTATATCCGGCGGTGAAGGGAGA ACTGCGCGATGTGGTGGAACTCACTTTCGTGCCATTCGGAAAGTCTCAGT TCGTTACCCAGGGCTCCGAAGTGACGTTCACCTGCCACCACGGACCGAAC GAGTGCTATGGCAATAAGGTGCATGCCTGCGCCATCGAGCACATTCAGGC CAACTCCTATCAGGTGGAGTACACGCGCGAGTCGCTCACGATGGACTTCA TCAACTGCCTAATGAAGGCCGGCAAGAATTTCCCGGACAACGTCTATCCC GGCCAGCGATGCGCCTCGGAGAACCACATCAATAACTGGGAGAACATCAA GACCTGTGCCAACTCCACCGAGGGAAGCGTTCTGCTCCGGAAGGCCGGCG AAAGCACCATGCGGCTCAAGGAGCCACTCACCAGCGTGCCCACCATTCTG TTCAATGAGCAATTCGACAAGAAGGTGAATGATCGCGCCCAGGTGAACTT GGTGGGCACCATCTGCCAATACGTATCCGCCCCGCAGCCGCGCATCTGCA ACCAGCACAACGGAGCATCGACTCCATCTTTGGCCAGCGTAAGCGCCATC CTTAGCTCCCTGCTGGGTCTTTGGTTTATCCGCTCCTTCTACTAAGCTAA GCTAAGCTCAACTGTCCACTCTCTCCGATGTTTCCATTTATATAACTCTT CCAAGTCAGCTCAAACCTTTGGCAATCGGGAATCTCAACACCTAATGCTG TATTTTGCTCTTGACCTTTTTGTTGGTTTGTTTTTTAGGCCAATTGAAAC GCAAGCCGTCCAATTATGCAGCTCGAATATGTGTATCAGAAATTAGTTTT CAAAGAGCTGATCGTAAAGTAGCAATTTAATAAAGTTGAAATAAAATATG GTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9796-RA | 1182 | CG9796-RA | 81..1182 | 1..1102 | 5510 | 100 | Plus |
CG9796.a | 982 | CG9796.a | 81..869 | 1..789 | 3945 | 100 | Plus |
CG9796.a | 982 | CG9796.a | 869..982 | 989..1102 | 570 | 100 | Plus |
CG14377-RA | 751 | CG14377-RA | 691..751 | 1103..1043 | 305 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 9223757..9224201 | 1102..658 | 2210 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 9224305..9224667 | 659..297 | 1755 | 98.9 | Minus |
chr3R | 27901430 | chr3R | 9226897..9227063 | 167..1 | 820 | 99.4 | Minus |
chr3R | 27901430 | chr3R | 9224742..9224878 | 299..163 | 685 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 13398525..13398970 | 1103..658 | 2230 | 100 | Minus |
3R | 32079331 | 3R | 13399073..13399435 | 659..297 | 1815 | 100 | Minus |
3R | 32079331 | 3R | 13401676..13401842 | 167..1 | 835 | 100 | Minus |
3R | 32079331 | 3R | 13399510..13399646 | 299..163 | 685 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 13139356..13139801 | 1103..658 | 2230 | 100 | Minus |
3R | 31820162 | 3R | 13139904..13140266 | 659..297 | 1815 | 100 | Minus |
3R | 31820162 | 3R | 13142507..13142673 | 167..1 | 835 | 100 | Minus |
3R | 31820162 | 3R | 13140341..13140477 | 299..163 | 685 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 9223757..9224199 | 660..1102 | 99 | <- | Minus |
chr3R | 9224305..9224664 | 300..659 | 98 | <- | Minus |
chr3R | 9224742..9224876 | 165..299 | 100 | <- | Minus |
chr3R | 9226900..9227063 | 1..164 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9796-RA | 1..753 | 93..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9796-RA | 1..753 | 93..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9796-RA | 1..753 | 93..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9796-RA | 1..753 | 93..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GILT1-RA | 1..753 | 93..845 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9796-RA | 17..1118 | 1..1102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9796-RA | 17..1118 | 1..1102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9796-RA | 21..1122 | 1..1102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9796-RA | 17..1118 | 1..1102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GILT1-RA | 21..1122 | 1..1102 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13398526..13398968 | 660..1102 | 100 | <- | Minus |
3R | 13399073..13399432 | 300..659 | 100 | <- | Minus |
3R | 13399510..13399644 | 165..299 | 100 | <- | Minus |
3R | 13401679..13401842 | 1..164 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13398526..13398968 | 660..1102 | 100 | <- | Minus |
3R | 13399073..13399432 | 300..659 | 100 | <- | Minus |
3R | 13399510..13399644 | 165..299 | 100 | <- | Minus |
3R | 13401679..13401842 | 1..164 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13398526..13398968 | 660..1102 | 100 | <- | Minus |
3R | 13399073..13399432 | 300..659 | 100 | <- | Minus |
3R | 13399510..13399644 | 165..299 | 100 | <- | Minus |
3R | 13401679..13401842 | 1..164 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 9224248..9224690 | 660..1102 | 100 | <- | Minus |
arm_3R | 9224795..9225154 | 300..659 | 100 | <- | Minus |
arm_3R | 9225232..9225366 | 165..299 | 100 | <- | Minus |
arm_3R | 9227401..9227564 | 1..164 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13139357..13139799 | 660..1102 | 100 | <- | Minus |
3R | 13139904..13140263 | 300..659 | 100 | <- | Minus |
3R | 13140341..13140475 | 165..299 | 100 | <- | Minus |
3R | 13142510..13142673 | 1..164 | 100 | Minus |
Translation from 92 to 844
> LD47508.pep MSHKIAAVCLLMSCLIATAYSAAKVPISIYYESLCPDSAKFITEQVYPAV KGELRDVVELTFVPFGKSQFVTQGSEVTFTCHHGPNECYGNKVHACAIEH IQANSYQVEYTRESLTMDFINCLMKAGKNFPDNVYPGQRCASENHINNWE NIKTCANSTEGSVLLRKAGESTMRLKEPLTSVPTILFNEQFDKKVNDRAQ VNLVGTICQYVSAPQPRICNQHNGASTPSLASVSAILSSLLGLWFIRSFY *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17383-PA | 251 | GF17383-PA | 1..251 | 1..250 | 1199 | 86.5 | Plus |
Dana\GF17838-PA | 213 | GF17838-PA | 34..199 | 24..211 | 214 | 32.4 | Plus |
Dana\GF16249-PA | 207 | GF16249-PA | 7..192 | 8..208 | 213 | 29 | Plus |
Dana\GF16248-PA | 226 | GF16248-PA | 40..212 | 21..209 | 180 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17054-PA | 250 | GG17054-PA | 1..250 | 1..250 | 1319 | 96.8 | Plus |
Dere\GG17351-PA | 209 | GG17351-PA | 22..192 | 16..208 | 222 | 33.2 | Plus |
Dere\GG11213-PA | 207 | GG11213-PA | 26..192 | 21..208 | 200 | 27.5 | Plus |
Dere\GG11212-PA | 218 | GG11212-PA | 32..202 | 23..209 | 182 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18545-PA | 245 | GH18545-PA | 1..245 | 1..250 | 1026 | 78 | Plus |
Dgri\GH19011-PA | 208 | GH19011-PA | 29..193 | 22..208 | 231 | 33.7 | Plus |
Dgri\GH14296-PA | 193 | GH14296-PA | 16..156 | 24..185 | 207 | 31.3 | Plus |
Dgri\GH18523-PA | 204 | GH18523-PA | 14..190 | 17..209 | 199 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GILT1-PA | 250 | CG9796-PA | 1..250 | 1..250 | 1320 | 100 | Plus |
CG41378-PC | 196 | CG41378-PC | 13..160 | 24..185 | 243 | 34.5 | Plus |
CG41378-PD | 205 | CG41378-PD | 22..169 | 24..185 | 243 | 34.5 | Plus |
CG41378-PB | 228 | CG41378-PB | 45..192 | 24..185 | 243 | 34.5 | Plus |
CG9427-PA | 213 | CG9427-PA | 34..196 | 24..208 | 212 | 33.5 | Plus |
CG9427-PB | 212 | CG9427-PB | 36..195 | 27..208 | 208 | 33.5 | Plus |
GILT2-PA | 207 | CG10157-PA | 7..176 | 8..192 | 175 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23244-PA | 245 | GI23244-PA | 1..244 | 1..250 | 1108 | 78.8 | Plus |
Dmoj\GI23067-PA | 208 | GI23067-PA | 1..193 | 1..208 | 247 | 32.1 | Plus |
Dmoj\GI23191-PA | 206 | GI23191-PA | 26..197 | 21..213 | 220 | 30.4 | Plus |
Dmoj\GI22060-PA | 234 | GI22060-PA | 48..220 | 21..209 | 184 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23064-PA | 250 | GL23064-PA | 1..250 | 1..250 | 1235 | 88 | Plus |
Dper\GL22172-PA | 217 | GL22172-PA | 36..203 | 22..211 | 234 | 34.2 | Plus |
Dper\GL13649-PA | 210 | GL13649-PA | 7..175 | 8..188 | 184 | 29.7 | Plus |
Dper\GL13648-PA | 224 | GL13648-PA | 1..209 | 1..208 | 184 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24052-PA | 250 | GA24052-PA | 1..250 | 1..250 | 1235 | 88 | Plus |
Dpse\GA22042-PA | 250 | GA22042-PA | 1..250 | 1..250 | 1235 | 88 | Plus |
Dpse\GA21779-PA | 217 | GA21779-PA | 36..203 | 22..211 | 234 | 34.2 | Plus |
Dpse\GA12550-PA | 214 | GA12550-PA | 1..199 | 1..208 | 199 | 28.3 | Plus |
Dpse\GA10118-PA | 210 | GA10118-PA | 7..175 | 8..188 | 184 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25939-PA | 250 | GM25939-PA | 1..250 | 1..250 | 1337 | 98.8 | Plus |
Dsec\GM26237-PA | 213 | GM26237-PA | 34..196 | 24..208 | 217 | 34.1 | Plus |
Dsec\GM26511-PA | 216 | GM26511-PA | 29..202 | 23..211 | 188 | 29 | Plus |
Dsec\GM26512-PA | 208 | GM26512-PA | 8..177 | 8..192 | 174 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20500-PA | 250 | GD20500-PA | 1..250 | 1..250 | 1348 | 99.6 | Plus |
Dsim\GD20778-PA | 213 | GD20778-PA | 34..196 | 24..208 | 217 | 34.1 | Plus |
Dsim\GD21021-PA | 208 | GD21021-PA | 8..180 | 8..195 | 186 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10741-PA | 244 | GJ10741-PA | 1..244 | 1..250 | 1123 | 80.4 | Plus |
Dvir\GJ24579-PA | 209 | GJ24579-PA | 1..194 | 1..208 | 259 | 33.8 | Plus |
Dvir\GJ14507-PA | 204 | GJ14507-PA | 11..182 | 21..213 | 216 | 29.4 | Plus |
Dvir\GJ24109-PA | 230 | GJ24109-PA | 47..216 | 24..209 | 210 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13347-PA | 232 | GK13347-PA | 1..230 | 1..232 | 1087 | 84.1 | Plus |
Dwil\GK11854-PA | 217 | GK11854-PA | 25..216 | 15..219 | 242 | 31.1 | Plus |
Dwil\GK13875-PA | 209 | GK13875-PA | 32..195 | 24..208 | 207 | 32.6 | Plus |
Dwil\GK13874-PA | 223 | GK13874-PA | 36..208 | 21..209 | 199 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24442-PA | 250 | GE24442-PA | 1..250 | 1..250 | 1329 | 97.6 | Plus |
Dyak\GE24757-PA | 213 | GE24757-PA | 34..196 | 24..208 | 221 | 34.6 | Plus |
Dyak\GE10377-PA | 207 | GE10377-PA | 29..192 | 24..208 | 176 | 28.5 | Plus |
Translation from 92 to 844
> LD47508.hyp MSHKIAAVCLLMSCLIATAYSAAKVPISIYYESLCPDSAKFITEQVYPAV KGELRDVVELTFVPFGKSQFVTQGSEVTFTCHHGPNECYGNKVHACAIEH IQANSYQVEYTRESLTMDFINCLMKAGKNFPDNVYPGQRCASENHINNWE NIKTCANSTEGSVLLRKAGESTMRLKEPLTSVPTILFNEQFDKKVNDRAQ VNLVGTICQYVSAPQPRICNQHNGASTPSLASVSAILSSLLGLWFIRSFY *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GILT1-PA | 250 | CG9796-PA | 1..250 | 1..250 | 1320 | 100 | Plus |
CG41378-PC | 196 | CG41378-PC | 13..160 | 24..185 | 243 | 34.5 | Plus |
CG41378-PD | 205 | CG41378-PD | 22..169 | 24..185 | 243 | 34.5 | Plus |
CG41378-PB | 228 | CG41378-PB | 45..192 | 24..185 | 243 | 34.5 | Plus |
CG9427-PA | 213 | CG9427-PA | 34..196 | 24..208 | 212 | 33.5 | Plus |