Clone LD47533 Report

Search the DGRC for LD47533

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:475
Well:33
Vector:pOT2
Associated Gene/Transcriptmus210-RA
Protein status:LD47533.pep: gold
Preliminary Size:4146
Sequenced Size:4321

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8153 2001-01-01 Release 2 assignment
CG8153 2001-12-12 Blastp of sequenced clone
CG8153 2003-01-01 Sim4 clustering to Release 3
mus210 2008-04-29 Release 5.5 accounting
mus210 2008-08-15 Release 5.9 accounting
mus210 2008-12-18 5.12 accounting

Clone Sequence Records

LD47533.complete Sequence

4321 bp (4321 high quality bases) assembled on 2001-12-12

GenBank Submission: AY070566

> LD47533.complete
GTGGGCGCGCATCTCTACTGTTCTCGGCCTCTGCTTTTTGTCTGTTTTCT
ACCAAGCGCGAAAATGTGAATTTCGCAATTCATTTAAACTGTCCAAAACC
GAGATCAGGCAGGATTAAACTTGCCCCCCAACATCCATAATCAAATATCA
AATCAGGAGAACGAACTTAGGATATTCTTGTGTAACGCGTGCCCTGAATA
ACTGCGCAGTAAAAATCAATAACTAAGTAGCACGCATCGATACATAAATG
TAAAACGCCCCAGATAAAAAGGAAGATGTCCGACGAGGAGGAGGATTCCG
TGTCCGAGGGCTTCTCGGCCAGCGAGGATGAATGGAAGCCGAGCAAGGAC
GTCAAGGGAGGCGAGTCCTCCGACGATGATGACAGCGATTTCGATGAGCT
CCAGGCGGAGGGAGGAGCAGCGGGCTCCAGTGGACGATCCTCCGCTGTAG
CGGGAAAAAGAGGCGATCACAAGGCACCAAGTGGCATCAAGGGCTCTTCG
GTGAAGAAACGCAAGCCCACTGGTCAATCACTTCGCTCCAAGCTGTACAA
TAAGTACCGACCGCCTCCAAAGACCTTTCCCACTTCTCCTTCGCAACAGA
AGGAGAACACTCCGCGGGCTTCGGGTTCAAAAAACGCCAAAACGCCCAAT
GAAAGCGGTGCACGGAATCAGCACGGTCCTGCTGATTCCAGCAGCGAATC
CAGTGTGGAAGACTACCTAGTAAATCCAGCCGATCTTGATCTGCACTCAA
CCTTCTTTGCCGGCGGCCAAAAAGAGAAGTCACCGGCGCCCCAATTCGAT
TGTAATGCGGGCATCACAAATCTTTCAGACTCTGGATCGGAGGATAACAA
CGAGAGCAGCTTCGAGGATAAAGCAGGCAATGCCTTCGACTTTCGCGGTC
TCCTGGAGAACGCAAACAGTTTGGAGCGCACTAGGGATGCTTTAAGCAAA
CGAAATGTCACGGCCACTCCGCCAAGGAGCCAGGCTGCCACCATGGATGT
CAATGCGCTGCTTGCATTGGGCGAGAACCAAAACTACCAGAGTGTGGAGG
TGGAGGAACGTGAAGGGAATCAGCGTAAGAAGGCGGGAAGAGGAGCACCA
GCAGCGCCTCCGACCCTTGATGAACCGTCACGCCTCAGCAAGACGAAGTC
AACGCGAATAAAGCGACACACCAAGACGCGACCCGTCTCCACGGTGGTCG
CCAACGCTGGTGATACTGATGACTCCGATTTTGAGGAAGTGGCAGATGCA
GATCTATCCAGTGACCAGGACGATGGCGAGACGCCGAACATCTCAGGGGA
TTTGGAGATACGCGTGGGACTGGAAGGGCTCCGTCCTACGAAGGAGCAAA
AGACTCAACACGAATTGGAGATGGCCCTAAAGCGTCGCCTTAACAGGGAC
ATCAAGGACCGTCAGATTTTGCTGCACAAAGTCAGCCTAATGTGCCAAAT
AGCTCGCAGCTTAAAGTACAATCGCCTGCTTAGCGAGTCAGATTCCCTGA
TGCAGGCTACCCTGAAACTCCTGCCAAGCCGAAACGCATATCCTACTGAA
CGAGGCACCGAACTTAAATATCTGCAGTCGTTTGTCACGTGGTTCAAAAC
ATCAATCAAGCTGCTAAGTCCCAACTTATATTCCGCGCAGTCGCCTGCTA
CCAAGGAAGCCATATTAGAGGCTTTACTGGAGCAGGTGAAGCGCAAGGAA
GCCCGCTGCAAGCAGGATATGATTTTCATATTCATTGCCCTTGCACGGGG
AATGGGCATGCACTGTCGGCTAATTGTCAATCTCCAGCCAATGCCACTGC
GTCCGGCGGCCAGTGATTTGATTCCCATTAAGCTTAGGCCAGATGATAAA
AACAAAAGCCAAACAGTGGAATCCGAAAGGGAAAGCGAGGATGAGAAGCC
TAAAAAAGATAAAAAGGCAGGGAAGCCAGCAGAAAAAGAAAGCAGTAAGT
CAACTATTTCCAAAGAGGCTGAAAAGAAAAACAATGCAAAAAAAGCTGAG
GCTAAACCACTCAGTAAATCAACAACCAAGGGTTCAGAAACCACGAAATC
AGGTACAGTTCCGAAGGTTAAAAAGGAGCTAAGTCTCTCCTCGAAATTGG
TTGAAAAATCAAAACATCAAAAAGCCTACACCTCCAGCAAATCGGACACT
TCCTTTGATGAGAAACCAAGTACGTCGTCCAGCTCTAAATGTCTAAAAGA
AGAATATTCAGAACTGGGATTATCCAAAAAGTTATTAAAACCGACTCTAT
CCTCAAAATTGGTTTTAAAATCAAAAAATCAATCTTCATTTAGTTCCAAT
AAATCGGACACTTCATTTGAGGAGAATCCCAGTACCTCATCAAGTTCCAA
ATCTTTAAAAGAAGAGACAGCCAAGTTAAGTTCATCCAAACTCGAAGACA
AAAAGGTCGCAAGCCCTGCCGAAACTAAAACTAAAGTACAATCGTCCCTT
CTAAAAAGGGTCACCACTCAAAATATTTCTGAATCAGGCGATAGCAAGAA
ACCGAAAGTGGCTCCTGTGGACACATTCTCTCCAGTGGCAGGTCGCACAC
GCAGAGCCACTGTGAAACCCAAAACAGAGGAAAAACCGCAGGTGGTTGGA
TCACCAGTTATACCTAAACTGATGCTGTCCAAAGTTAAGCAGCTAAATGC
CAAGCATAGTGATACGGAAAACGCTAGTCCTGCGAATAAACATCTGCAGG
AACAGCGCAACACACGAGAAACTCGATCAAGGAGCAAGTCCCCGAAAGTA
CTTATATCCCCTAGTTTCCTTAAAAAGAAATCCGACGGAGCCGATTCCAC
TTCAGACCCTCAAAAGCATCAAATGGCGCCGGAAACTAAGGCGCGAATTT
CGCCAAACTTTCTGTCCGAAGCTTTGCCAGCTCGTCAGCTACGAAGCCGA
GGTCAAAAAGCCAGTAGTCTAGCCATTCCGCAATTAGACGGCGGTGACGA
TGTGCCGCTACCGAAAAAGCGCCCAAAACTGGAGAAGTTGAAAAATTCGC
AAGATTCCGATGAGGTGTTTGAACCCGCCAAGCCGGTGAAAAAGGCTCCT
GTACTGCCCAAGTCAGTACAGAATCTGCGAAAAGATCGGCGAGTGATGTC
AACAGATGATGAGGGCGGTTCCAGGCTCAATCGGAAAACGGACGCCTCTG
ACATGTGGGTGGAAGTGTGGTCAGATGTGGAGGAGCAGTGGATCTGTATA
GATCTGTTCAAAGGCAAGCTACACTGCGTGGACACAATAAGGAAAAATGC
AACGCCTGGATTAGCCTACGTCTTCGCCTTTCAGGATGATCAGAGTTTGA
AGGATGTGACCGCCAGGTACTGCGCCAGTTGGAGCACCACTGTGCGCAAA
GCCCGTGTAGAAAAGGCGTGGCTAGATGAAACTATTGCTCCTTACCTCGG
ACGCCGCACCAAGCGCGATATAACAGAGGATGATCAGCTACGTCGCATTC
ACTCCGATAAACCCTTGCCAAAGTCAATTTCCGAGTTCAAGGACCATCCG
CTGTACGTGCTAGAGCGGCACTTGCTTAAGTTCCAGGGTCTATATCCACC
AGATGCGCCTACATTGGGCTTTATCCGTGGTGAAGCGGTGTACTCCAGAG
ATTGTGTGCACCTCCTGCATTCTCGGGAAATATGGCTAAAAAGCGCACGG
GTGGTGAAGCTTGGCGAACAGCCGTACAAGGTGGTTAAGGCACGTCCAAA
GTGGGATAGGCTCACGCGCACTGTTATTAAGGACCAGCCATTGGAAATCT
TCGGGTATTGGCAAACTCAGGAATACGAGCCCCCAACTGCAGAGAATGGA
ATTGTGCCGCGAAATGCCTACGGCAATGTTGAGCTCTTTAAGGACTGCAT
GCTGCCAAAGAAGACGGTGCATTTGAGATTGCCCGGCTTGATGCGCATCT
GTAAGAAGCTGAATATTGATTGTGCCAATGCAGTGGTTGGCTTCGATTTT
CATCAAGGCGCTTGTCATCCCATGTACGATGGCTTCATTGTTTGCGAGGA
ATTCCGCGAAGTGGTCACTGCTGCCTGGGAAGAGGATCAACAGGTACAAG
TTCTCAAGGAGCAGGAGAAGTACGAAACCCGCGTGTACGGAAACTGGAAG
AAGCTGATCAAGGGTCTCCTCATTCGCGAGCGACTCAAGAAAAAATATAA
CTTTTGAATTCTTTGGCCTCTGATTTATGTTCGTATTATTGTTTCGTTTA
AAGGCATTTTGATATTTTTGTATTTAAAACGTAATTTGATTCCAATAAAT
TGTACACTAGTTGTTTAGAATTCGTTTATTAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA

LD47533.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:49:50
Subject Length Description Subject Range Query Range Score Percent Strand
mus210-RA 4434 mus210-RA 72..4353 1..4282 21410 100 Plus
mus210-RC 4461 mus210-RC 96..4380 1..4282 21355 99.9 Plus
mus210-RB 2416 mus210-RB 274..2410 2146..4282 10685 100 Plus
mus210-RB 2416 mus210-RB 20..275 1..256 1280 100 Plus
mus210-RB 2416 mus210-RB 429..493 2139..2203 160 83 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:03:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 11201819..11203819 1242..3242 9870 99.6 Plus
chr2R 21145070 chr2R 11199239..11200021 463..1245 3885 99.7 Plus
chr2R 21145070 chr2R 11198709..11199171 1..463 2315 100 Plus
chr2R 21145070 chr2R 11203884..11204352 3242..3710 2315 99.6 Plus
chr2R 21145070 chr2R 11204639..11205039 3880..4280 1945 99 Plus
chr2R 21145070 chr2R 11204413..11204582 3710..3879 820 98.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:44:33 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:03:23
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15314614..15316614 1242..3242 10005 100 Plus
2R 25286936 2R 15312035..15312817 463..1245 3915 100 Plus
2R 25286936 2R 15316679..15317147 3242..3710 2345 100 Plus
2R 25286936 2R 15311505..15311967 1..463 2315 100 Plus
2R 25286936 2R 15317434..15317836 3880..4282 2015 100 Plus
2R 25286936 2R 15317208..15317377 3710..3879 850 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:15:53
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 15315813..15317813 1242..3242 10005 100 Plus
2R 25260384 2R 15313234..15314016 463..1245 3915 100 Plus
2R 25260384 2R 15317878..15318346 3242..3710 2345 100 Plus
2R 25260384 2R 15312704..15313166 1..463 2315 100 Plus
2R 25260384 2R 15318633..15319035 3880..4282 2015 100 Plus
2R 25260384 2R 15318407..15318576 3710..3879 850 100 Plus
Blast to na_te.dros performed on 2019-03-16 06:03:24 has no hits.

LD47533.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:04:20 Download gff for LD47533.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 11198709..11199171 1..463 100 -> Plus
chr2R 11199240..11200021 464..1245 99 -> Plus
chr2R 11201823..11203819 1246..3242 99 -> Plus
chr2R 11203885..11204352 3243..3710 99 -> Plus
chr2R 11204414..11204582 3711..3879 98 -> Plus
chr2R 11204639..11205039 3880..4280 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:31:34 Download gff for LD47533.complete
Subject Subject Range Query Range Percent Splice Strand
mus210-RA 1..3882 276..4157 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:18:49 Download gff for LD47533.complete
Subject Subject Range Query Range Percent Splice Strand
mus210-RA 1..3882 276..4157 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:15:25 Download gff for LD47533.complete
Subject Subject Range Query Range Percent Splice Strand
mus210-RA 1..3882 276..4157 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:44:57 Download gff for LD47533.complete
Subject Subject Range Query Range Percent Splice Strand
mus210-RA 1..3882 276..4157 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:14:37 Download gff for LD47533.complete
Subject Subject Range Query Range Percent Splice Strand
mus210-RA 1..3882 276..4157 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:51:57 Download gff for LD47533.complete
Subject Subject Range Query Range Percent Splice Strand
mus210-RA 20..4299 1..4280 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:18:48 Download gff for LD47533.complete
Subject Subject Range Query Range Percent Splice Strand
mus210-RA 20..4299 1..4280 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:15:25 Download gff for LD47533.complete
Subject Subject Range Query Range Percent Splice Strand
mus210-RA 1..4275 6..4280 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:44:57 Download gff for LD47533.complete
Subject Subject Range Query Range Percent Splice Strand
mus210-RA 20..4299 1..4280 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:14:37 Download gff for LD47533.complete
Subject Subject Range Query Range Percent Splice Strand
mus210-RA 1..4275 6..4280 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:04:20 Download gff for LD47533.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15311505..15311967 1..463 100 -> Plus
2R 15312036..15312817 464..1245 100 -> Plus
2R 15314618..15316614 1246..3242 100 -> Plus
2R 15316680..15317147 3243..3710 100 -> Plus
2R 15317209..15317377 3711..3879 100 -> Plus
2R 15317434..15317834 3880..4280 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:04:20 Download gff for LD47533.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15311505..15311967 1..463 100 -> Plus
2R 15312036..15312817 464..1245 100 -> Plus
2R 15314618..15316614 1246..3242 100 -> Plus
2R 15316680..15317147 3243..3710 100 -> Plus
2R 15317209..15317377 3711..3879 100 -> Plus
2R 15317434..15317834 3880..4280 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:04:20 Download gff for LD47533.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15311505..15311967 1..463 100 -> Plus
2R 15312036..15312817 464..1245 100 -> Plus
2R 15314618..15316614 1246..3242 100 -> Plus
2R 15316680..15317147 3243..3710 100 -> Plus
2R 15317209..15317377 3711..3879 100 -> Plus
2R 15317434..15317834 3880..4280 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:15:25 Download gff for LD47533.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11204714..11204882 3711..3879 100 -> Plus
arm_2R 11199010..11199472 1..463 100 -> Plus
arm_2R 11199541..11200322 464..1245 100 -> Plus
arm_2R 11202123..11204119 1246..3242 100 -> Plus
arm_2R 11204185..11204652 3243..3710 100 -> Plus
arm_2R 11204939..11205339 3880..4280 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:21:16 Download gff for LD47533.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15312704..15313166 1..463 100 -> Plus
2R 15313235..15314016 464..1245 100 -> Plus
2R 15315817..15317813 1246..3242 100 -> Plus
2R 15317879..15318346 3243..3710 100 -> Plus
2R 15318408..15318576 3711..3879 100 -> Plus
2R 15318633..15319033 3880..4280 100   Plus

LD47533.pep Sequence

Translation from 275 to 4156

> LD47533.pep
MSDEEEDSVSEGFSASEDEWKPSKDVKGGESSDDDDSDFDELQAEGGAAG
SSGRSSAVAGKRGDHKAPSGIKGSSVKKRKPTGQSLRSKLYNKYRPPPKT
FPTSPSQQKENTPRASGSKNAKTPNESGARNQHGPADSSSESSVEDYLVN
PADLDLHSTFFAGGQKEKSPAPQFDCNAGITNLSDSGSEDNNESSFEDKA
GNAFDFRGLLENANSLERTRDALSKRNVTATPPRSQAATMDVNALLALGE
NQNYQSVEVEEREGNQRKKAGRGAPAAPPTLDEPSRLSKTKSTRIKRHTK
TRPVSTVVANAGDTDDSDFEEVADADLSSDQDDGETPNISGDLEIRVGLE
GLRPTKEQKTQHELEMALKRRLNRDIKDRQILLHKVSLMCQIARSLKYNR
LLSESDSLMQATLKLLPSRNAYPTERGTELKYLQSFVTWFKTSIKLLSPN
LYSAQSPATKEAILEALLEQVKRKEARCKQDMIFIFIALARGMGMHCRLI
VNLQPMPLRPAASDLIPIKLRPDDKNKSQTVESERESEDEKPKKDKKAGK
PAEKESSKSTISKEAEKKNNAKKAEAKPLSKSTTKGSETTKSGTVPKVKK
ELSLSSKLVEKSKHQKAYTSSKSDTSFDEKPSTSSSSKCLKEEYSELGLS
KKLLKPTLSSKLVLKSKNQSSFSSNKSDTSFEENPSTSSSSKSLKEETAK
LSSSKLEDKKVASPAETKTKVQSSLLKRVTTQNISESGDSKKPKVAPVDT
FSPVAGRTRRATVKPKTEEKPQVVGSPVIPKLMLSKVKQLNAKHSDTENA
SPANKHLQEQRNTRETRSRSKSPKVLISPSFLKKKSDGADSTSDPQKHQM
APETKARISPNFLSEALPARQLRSRGQKASSLAIPQLDGGDDVPLPKKRP
KLEKLKNSQDSDEVFEPAKPVKKAPVLPKSVQNLRKDRRVMSTDDEGGSR
LNRKTDASDMWVEVWSDVEEQWICIDLFKGKLHCVDTIRKNATPGLAYVF
AFQDDQSLKDVTARYCASWSTTVRKARVEKAWLDETIAPYLGRRTKRDIT
EDDQLRRIHSDKPLPKSISEFKDHPLYVLERHLLKFQGLYPPDAPTLGFI
RGEAVYSRDCVHLLHSREIWLKSARVVKLGEQPYKVVKARPKWDRLTRTV
IKDQPLEIFGYWQTQEYEPPTAENGIVPRNAYGNVELFKDCMLPKKTVHL
RLPGLMRICKKLNIDCANAVVGFDFHQGACHPMYDGFIVCEEFREVVTAA
WEEDQQVQVLKEQEKYETRVYGNWKKLIKGLLIRERLKKKYNF*

LD47533.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:13:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13029-PA 1264 GF13029-PA 12..1264 12..1293 4500 72.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:13:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20510-PA 1101 GG20510-PA 562..1101 754..1293 2793 92.6 Plus
Dere\GG20510-PA 1101 GG20510-PA 1..538 1..537 2604 95.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:13:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22443-PA 614 GH22443-PA 19..614 688..1293 2230 70.6 Plus
Dgri\GH13928-PA 1219 GH13928-PA 12..668 12..659 1827 63.2 Plus
Dgri\GH20424-PA 420 GH20424-PA 12..416 12..403 1266 69.4 Plus
Dgri\GH13929-PA 408 GH13929-PA 12..404 12..403 1196 66.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:19
Subject Length Description Subject Range Query Range Score Percent Strand
Xpc-PA 1293 CG8153-PA 1..1293 1..1293 6633 100 Plus
Xpc-PC 1294 CG8153-PC 1..1294 1..1293 6621 99.9 Plus
Xpc-PD 330 CG8153-PD 1..324 1..323 1649 99.7 Plus
Nopp140-PF 685 CG7421-PF 144..534 507..881 200 24.9 Plus
Nopp140-PB 686 CG7421-PB 144..534 507..881 200 24.9 Plus
Nopp140-PA 720 CG7421-PA 144..534 507..881 200 24.9 Plus
Nopp140-PE 773 CG7421-PE 144..534 507..881 200 24.9 Plus
Strn-Mlck-PT 7905 CG44162-PT 3677..4119 525..971 190 20.3 Plus
Strn-Mlck-PT 7905 CG44162-PT 3726..4704 3..971 190 17.9 Plus
Strn-Mlck-PV 7944 CG44162-PV 3716..4158 525..971 190 20.3 Plus
Strn-Mlck-PV 7944 CG44162-PV 3765..4743 3..971 190 17.9 Plus
Strn-Mlck-PS 8216 CG44162-PS 3677..4119 525..971 190 20.3 Plus
Strn-Mlck-PS 8216 CG44162-PS 3726..4704 3..971 190 17.9 Plus
Strn-Mlck-PU 8255 CG44162-PU 3716..4158 525..971 190 20.3 Plus
Strn-Mlck-PU 8255 CG44162-PU 3765..4743 3..971 190 17.9 Plus
PNUTS-PE 1135 CG33526-PE 207..652 513..959 189 23 Plus
PNUTS-PD 1135 CG33526-PD 207..652 513..959 189 23 Plus
Strn-Mlck-PT 7905 CG44162-PT 4431..4899 513..971 188 20.8 Plus
Strn-Mlck-PV 7944 CG44162-PV 4470..4938 513..971 188 20.8 Plus
Strn-Mlck-PS 8216 CG44162-PS 4431..4899 513..971 188 20.8 Plus
Strn-Mlck-PU 8255 CG44162-PU 4470..4938 513..971 188 20.8 Plus
CG14692-PE 2851 CG14692-PE 1101..1500 533..909 187 24.3 Plus
PNUTS-PA 628 CG33526-PA 207..550 513..861 178 23.2 Plus
PNUTS-PB 628 CG33526-PB 207..550 513..861 178 23.2 Plus
Strn-Mlck-PT 7905 CG44162-PT 3465..3924 523..971 174 20.6 Plus
Strn-Mlck-PV 7944 CG44162-PV 3504..3963 523..971 174 20.6 Plus
Strn-Mlck-PS 8216 CG44162-PS 3465..3924 523..971 174 20.6 Plus
Strn-Mlck-PU 8255 CG44162-PU 3504..3963 523..971 174 20.6 Plus
Strn-Mlck-PT 7905 CG44162-PT 4587..5029 525..971 171 19.8 Plus
Strn-Mlck-PV 7944 CG44162-PV 4626..5068 525..971 171 19.8 Plus
Strn-Mlck-PS 8216 CG44162-PS 4587..5029 525..971 171 19.8 Plus
Strn-Mlck-PU 8255 CG44162-PU 4626..5068 525..971 171 19.8 Plus
CG14692-PE 2851 CG14692-PE 1192..1589 523..861 168 25.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:13:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19607-PA 1254 GI19607-PA 12..1254 12..1293 3877 63.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:13:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11089-PA 567 GL11089-PA 1..567 734..1293 2338 76 Plus
Dper\GL11088-PA 569 GL11088-PA 1..544 1..538 1858 73.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:13:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20854-PA 1247 GA20854-PA 1..1247 1..1293 4194 66.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:14:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21602-PA 1117 GM21602-PA 569..1117 745..1293 2956 96.9 Plus
Dsec\GM21602-PA 1117 GM21602-PA 1..538 1..537 2697 98.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:14:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11107-PA 1117 GD11107-PA 569..1117 745..1293 2976 98 Plus
Dsim\GD11107-PA 1117 GD11107-PA 1..538 1..537 2687 98.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:14:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14972-PA 1266 GJ14972-PA 685..1266 717..1293 2252 71.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:14:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20890-PA 1209 GK20890-PA 624..1209 686..1293 2100 68.1 Plus
Dwil\GK20890-PA 1209 GK20890-PA 1..548 1..531 1700 69.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:14:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13643-PA 1296 GE13643-PA 1..1296 1..1293 6003 90.5 Plus

LD47533.hyp Sequence

Translation from 275 to 4156

> LD47533.hyp
MSDEEEDSVSEGFSASEDEWKPSKDVKGGESSDDDDSDFDELQAEGGAAG
SSGRSSAVAGKRGDHKAPSGIKGSSVKKRKPTGQSLRSKLYNKYRPPPKT
FPTSPSQQKENTPRASGSKNAKTPNESGARNQHGPADSSSESSVEDYLVN
PADLDLHSTFFAGGQKEKSPAPQFDCNAGITNLSDSGSEDNNESSFEDKA
GNAFDFRGLLENANSLERTRDALSKRNVTATPPRSQAATMDVNALLALGE
NQNYQSVEVEEREGNQRKKAGRGAPAAPPTLDEPSRLSKTKSTRIKRHTK
TRPVSTVVANAGDTDDSDFEEVADADLSSDQDDGETPNISGDLEIRVGLE
GLRPTKEQKTQHELEMALKRRLNRDIKDRQILLHKVSLMCQIARSLKYNR
LLSESDSLMQATLKLLPSRNAYPTERGTELKYLQSFVTWFKTSIKLLSPN
LYSAQSPATKEAILEALLEQVKRKEARCKQDMIFIFIALARGMGMHCRLI
VNLQPMPLRPAASDLIPIKLRPDDKNKSQTVESERESEDEKPKKDKKAGK
PAEKESSKSTISKEAEKKNNAKKAEAKPLSKSTTKGSETTKSGTVPKVKK
ELSLSSKLVEKSKHQKAYTSSKSDTSFDEKPSTSSSSKCLKEEYSELGLS
KKLLKPTLSSKLVLKSKNQSSFSSNKSDTSFEENPSTSSSSKSLKEETAK
LSSSKLEDKKVASPAETKTKVQSSLLKRVTTQNISESGDSKKPKVAPVDT
FSPVAGRTRRATVKPKTEEKPQVVGSPVIPKLMLSKVKQLNAKHSDTENA
SPANKHLQEQRNTRETRSRSKSPKVLISPSFLKKKSDGADSTSDPQKHQM
APETKARISPNFLSEALPARQLRSRGQKASSLAIPQLDGGDDVPLPKKRP
KLEKLKNSQDSDEVFEPAKPVKKAPVLPKSVQNLRKDRRVMSTDDEGGSR
LNRKTDASDMWVEVWSDVEEQWICIDLFKGKLHCVDTIRKNATPGLAYVF
AFQDDQSLKDVTARYCASWSTTVRKARVEKAWLDETIAPYLGRRTKRDIT
EDDQLRRIHSDKPLPKSISEFKDHPLYVLERHLLKFQGLYPPDAPTLGFI
RGEAVYSRDCVHLLHSREIWLKSARVVKLGEQPYKVVKARPKWDRLTRTV
IKDQPLEIFGYWQTQEYEPPTAENGIVPRNAYGNVELFKDCMLPKKTVHL
RLPGLMRICKKLNIDCANAVVGFDFHQGACHPMYDGFIVCEEFREVVTAA
WEEDQQVQVLKEQEKYETRVYGNWKKLIKGLLIRERLKKKYNF*

LD47533.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:51:39
Subject Length Description Subject Range Query Range Score Percent Strand
mus210-PA 1293 CG8153-PA 1..1293 1..1293 6633 100 Plus
mus210-PC 1294 CG8153-PC 1..1294 1..1293 6621 99.9 Plus
mus210-PD 330 CG8153-PD 1..324 1..323 1649 99.7 Plus
Nopp140-PF 685 CG7421-PF 144..534 507..881 200 24.9 Plus
Nopp140-PB 686 CG7421-PB 144..534 507..881 200 24.9 Plus