BDGP Sequence Production Resources |
Search the DGRC for LD47536
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 475 |
Well: | 36 |
Vector: | pOT2 |
Associated Gene/Transcript | Gs1-RB |
Protein status: | LD47536.pep: gold |
Preliminary Size: | 1808 |
Sequenced Size: | 1715 |
Gene | Date | Evidence |
---|---|---|
CG2718 | 2001-01-01 | Release 2 assignment |
CG2718 | 2001-09-19 | Blastp of sequenced clone |
Gs1 | 2008-04-29 | Release 5.5 accounting |
Gs1 | 2008-08-15 | Release 5.9 accounting |
Gs1 | 2008-12-18 | 5.12 accounting |
1715 bp (1715 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058730
> LD47536.complete CACAAGACTTCCAAACATCGAATTGGTCGGGTGTCCCCAACAGTCGCTCC GCAGCCCCTGACAGAAACAGAAACGAAAACCGAAAGTACCGCAATCCAAA ATTACCAAAAGACCTGTCCAACCAGCGACTGTTTAACCAATCATATAACT GTAAAGTGGAAAAACGAGCAGAGCACGAACCAAGATGGCACTACGCGTGG CAGGACTCTTCCTGAAGAAGGAGCTGGTGGCTCCCGCAACACAGCAGCTG CGTCTGCTGCGTACTGGCAATACCACCCGCTCCCAGTTCTTGGCCAACTC CCCCAACACGGCTCTAGACAAGAGCATTCTGCAGAGGTACCGCAACCTGG AAACGCCGGCCAATCGAGTGCAGGCTACTTACTTATGGATCGACGGTACC GGCGAGAACATTCGCCTCAAGGATCGCGTTTTGGACAAAGTACCCAGCTC CGTGGAGGACTTGCCGGATTGGCAGTACGACGGCAGTTCCACCTACCAGG CCCATGGCGAGAACTCGGACACCACGCTCAAGCCACGCGCCATATATCGC GATCCCTTTAAGCCGGGAAAGAACGACGTAATTGTCCTGTGCGACACCTA CAGCGCCGACGGCAAGCCGACGGCGTCCAACAAGCGTGCCGCGTTCCAGG CAGCCATTGACCTAATTAGCGATCAGGAGCCCTGGTTCGGCATTGAGCAA GAATACACTTTATTAGACGTGGACGGACGTCCCTTCGGCTGGCCGGAGAA CGGTTTCCCAGCCCCACAAGGTCCTTACTACTGCGGCGTGGGAGCTGACC GTGTGTACGCTCGCGATCTTGTGGAGGCCCACGTCGTGGCCTGCCTGTAT GCTGGGATCGACTTCGCCGGCACCAATGCCGAGGTAATGCCCGCGCAGTG GGAGTTCCAAATTGGTCCAGCCGGGATTAAGGCATGTGACGATTTATGGG TGTCGCGATATATTTTGCAGCGCATAGCTGAGGAGTATGGCGTAGTGGTC ACCTTTGACCCCAAACCGATGGAGGGTCAGTGGAACGGAGCCGGCGCGCA TACCAACTTTTCCACAAAGGAGATGCGTGCTGATGGCGGAATCAAGGCCA TCGAGGAAGCTATCGAGAAGCTGAGCAAGCGCCACGAGCGGCACATCAAG GCATACGACCCCAAGGAAGGCAAAGACAATGAACGGCGCCTCGTGGGACG TCTTGAGACTTCTAGCATCGATAAGTTTTCTTGGGGCGTGGCCAACCGGG CCGTAAGTGTGCGAGTGCCGCGTGGCGTTGCGACGGCCGGCAAAGGATAC CTCGAAGACCGGCGGCCAAGCTCCAACTGTGATCCCTACGCCGTGTGCAA CGCCATTGTTCGCACCTGCCTGCTCAACGAGTAGGCTGTGAGCGGTGCAA CAGATGTTTAATTTTTTGTACATTATGTTTTATGGAACTGTGAAGCGTAT CCGATCATTTGGTTATATTTACATTGAACTGAAGCAAAATTTAGTTTGCT TGTGCAAAAAAGACAGGAGACCGAGGCACGAAAAGCGTGCGCTTAGAATT TAAGAACGTGGGTGGGTGGCAAGAAGAACTAAGCTAAAGCGAAATTTCCT TAAAGCGATGGGGCCTCATGAATACTTTGCCATATATCTCACAAACTACG TATATCTATCATTGCTTTAATCTAAATAATAAAAAACATTGTACTCTAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gs1-RB | 2610 | Gs1-RB | 156..1853 | 1..1698 | 8490 | 100 | Plus |
Gs1.a | 2610 | Gs1.a | 156..1853 | 1..1698 | 8490 | 100 | Plus |
Gs1-RC | 2413 | Gs1-RC | 416..1937 | 177..1698 | 7610 | 100 | Plus |
Gs1-RC | 2413 | Gs1-RC | 20..196 | 1..177 | 885 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 132512..134032 | 177..1697 | 7590 | 99.9 | Plus |
chr2L | 23010047 | chr2L | 132116..132292 | 1..177 | 885 | 100 | Plus |
chrX | 22417052 | chrX | 11320170..11320273 | 806..909 | 205 | 79.8 | Plus |
chrX | 22417052 | chrX | 11319927..11320041 | 675..789 | 200 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 132475..133996 | 177..1698 | 7610 | 100 | Plus |
2L | 23513712 | 2L | 132079..132255 | 1..177 | 885 | 100 | Plus |
X | 23542271 | X | 11428742..11428856 | 675..789 | 215 | 79.1 | Plus |
X | 23542271 | X | 11428985..11429088 | 806..909 | 205 | 79.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 132475..133996 | 177..1698 | 7610 | 100 | Plus |
2L | 23513712 | 2L | 132079..132255 | 1..177 | 885 | 100 | Plus |
X | 23527363 | X | 11436840..11436954 | 675..789 | 215 | 79.1 | Plus |
X | 23527363 | X | 11437116..11437186 | 839..909 | 190 | 84.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 132116..132292 | 1..177 | 100 | -> | Plus |
chr2L | 132513..134032 | 178..1697 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs1-RB | 1..1200 | 185..1384 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs1-RD | 1..1200 | 185..1384 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs1-RC | 1..1200 | 185..1384 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs1-RB | 1..1200 | 185..1384 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs1-RC | 1..1200 | 185..1384 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs1-RB | 20..1716 | 1..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs1-RB | 20..1716 | 1..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs1-RB | 3..1699 | 1..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs1-RB | 20..1716 | 1..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gs1-RB | 3..1699 | 1..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 132079..132255 | 1..177 | 100 | -> | Plus |
2L | 132476..133995 | 178..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 132079..132255 | 1..177 | 100 | -> | Plus |
2L | 132476..133995 | 178..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 132079..132255 | 1..177 | 100 | -> | Plus |
2L | 132476..133995 | 178..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 132079..132255 | 1..177 | 100 | -> | Plus |
arm_2L | 132476..133995 | 178..1697 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 132476..133995 | 178..1697 | 100 | Plus | |
2L | 132079..132255 | 1..177 | 100 | -> | Plus |
Translation from 184 to 1383
> LD47536.pep MALRVAGLFLKKELVAPATQQLRLLRTGNTTRSQFLANSPNTALDKSILQ RYRNLETPANRVQATYLWIDGTGENIRLKDRVLDKVPSSVEDLPDWQYDG SSTYQAHGENSDTTLKPRAIYRDPFKPGKNDVIVLCDTYSADGKPTASNK RAAFQAAIDLISDQEPWFGIEQEYTLLDVDGRPFGWPENGFPAPQGPYYC GVGADRVYARDLVEAHVVACLYAGIDFAGTNAEVMPAQWEFQIGPAGIKA CDDLWVSRYILQRIAEEYGVVVTFDPKPMEGQWNGAGAHTNFSTKEMRAD GGIKAIEEAIEKLSKRHERHIKAYDPKEGKDNERRLVGRLETSSIDKFSW GVANRAVSVRVPRGVATAGKGYLEDRRPSSNCDPYAVCNAIVRTCLLNE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14864-PA | 400 | GF14864-PA | 1..400 | 1..399 | 2025 | 93.2 | Plus |
Dana\GF22546-PA | 299 | GF22546-PA | 3..298 | 33..328 | 1063 | 64.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24698-PA | 399 | GG24698-PA | 1..399 | 1..399 | 2099 | 97.7 | Plus |
Dere\GG18416-PA | 369 | GG18416-PA | 3..369 | 33..399 | 1308 | 64.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10061-PA | 400 | GH10061-PA | 1..400 | 1..399 | 1960 | 89.2 | Plus |
Dgri\GH12401-PA | 369 | GH12401-PA | 3..369 | 33..399 | 1333 | 65.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gs1-PD | 399 | CG2718-PD | 1..399 | 1..399 | 2117 | 100 | Plus |
Gs1-PB | 399 | CG2718-PB | 1..399 | 1..399 | 2117 | 100 | Plus |
Gs1-PC | 399 | CG2718-PC | 1..399 | 1..399 | 2117 | 100 | Plus |
Gs2-PB | 369 | CG1743-PB | 3..369 | 33..399 | 1303 | 64.9 | Plus |
Gs2-PF | 369 | CG1743-PF | 3..369 | 33..399 | 1302 | 64.7 | Plus |
Gs2-PE | 369 | CG1743-PE | 3..369 | 33..399 | 1302 | 64.7 | Plus |
Gs2-PC | 369 | CG1743-PC | 3..369 | 33..399 | 1302 | 64.7 | Plus |
Gs2-PD | 373 | CG1743-PD | 7..373 | 33..399 | 1302 | 64.7 | Plus |
Gs2-PA | 266 | CG1743-PA | 1..266 | 135..399 | 997 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16461-PA | 400 | GI16461-PA | 1..400 | 1..399 | 1966 | 89.8 | Plus |
Dmoj\GI15717-PA | 369 | GI15717-PA | 3..369 | 33..399 | 1324 | 64.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13945-PA | 400 | GL13945-PA | 1..400 | 1..399 | 2003 | 93 | Plus |
Dper\GL14860-PA | 369 | GL14860-PA | 3..369 | 33..399 | 1313 | 64.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15446-PA | 400 | GA15446-PA | 1..400 | 1..399 | 2003 | 93 | Plus |
Dpse\GA14508-PA | 369 | GA14508-PA | 3..369 | 33..399 | 1313 | 64.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16716-PA | 399 | GM16716-PA | 1..399 | 1..399 | 2122 | 99.2 | Plus |
Dsec\GM13079-PA | 369 | GM13079-PA | 2..369 | 32..399 | 1313 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23002-PA | 399 | GD23002-PA | 1..399 | 1..399 | 2116 | 99 | Plus |
Dsim\GD17021-PA | 310 | GD17021-PA | 4..310 | 93..399 | 1143 | 67.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16218-PA | 400 | GJ16218-PA | 1..400 | 1..399 | 1988 | 90.8 | Plus |
Dvir\GJ15245-PA | 369 | GJ15245-PA | 3..369 | 33..399 | 1330 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24607-PA | 397 | GK24607-PA | 1..397 | 1..399 | 1940 | 90.2 | Plus |
Dwil\GK16230-PA | 369 | GK16230-PA | 3..369 | 33..399 | 1310 | 64.9 | Plus |
Dwil\GK24485-PA | 367 | GK24485-PA | 3..367 | 33..399 | 1218 | 60.6 | Plus |
Dwil\GK24614-PA | 367 | GK24614-PA | 5..367 | 35..399 | 1122 | 57.9 | Plus |
Translation from 184 to 1383
> LD47536.hyp MALRVAGLFLKKELVAPATQQLRLLRTGNTTRSQFLANSPNTALDKSILQ RYRNLETPANRVQATYLWIDGTGENIRLKDRVLDKVPSSVEDLPDWQYDG SSTYQAHGENSDTTLKPRAIYRDPFKPGKNDVIVLCDTYSADGKPTASNK RAAFQAAIDLISDQEPWFGIEQEYTLLDVDGRPFGWPENGFPAPQGPYYC GVGADRVYARDLVEAHVVACLYAGIDFAGTNAEVMPAQWEFQIGPAGIKA CDDLWVSRYILQRIAEEYGVVVTFDPKPMEGQWNGAGAHTNFSTKEMRAD GGIKAIEEAIEKLSKRHERHIKAYDPKEGKDNERRLVGRLETSSIDKFSW GVANRAVSVRVPRGVATAGKGYLEDRRPSSNCDPYAVCNAIVRTCLLNE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gs1-PD | 399 | CG2718-PD | 1..399 | 1..399 | 2117 | 100 | Plus |
Gs1-PB | 399 | CG2718-PB | 1..399 | 1..399 | 2117 | 100 | Plus |
Gs1-PC | 399 | CG2718-PC | 1..399 | 1..399 | 2117 | 100 | Plus |
Gs2-PB | 369 | CG1743-PB | 3..369 | 33..399 | 1303 | 64.9 | Plus |
Gs2-PF | 369 | CG1743-PF | 3..369 | 33..399 | 1302 | 64.7 | Plus |