BDGP Sequence Production Resources |
Search the DGRC for LD47549
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 475 |
Well: | 49 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4572-RA |
Protein status: | LD47549.pep: gold |
Preliminary Size: | 1952 |
Sequenced Size: | 1830 |
Gene | Date | Evidence |
---|---|---|
CG4572 | 2001-01-01 | Release 2 assignment |
CG4572 | 2001-07-04 | Blastp of sequenced clone |
CG4572 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4572 | 2008-04-29 | Release 5.5 accounting |
CG4572 | 2008-08-15 | Release 5.9 accounting |
CG4572 | 2008-12-18 | 5.12 accounting |
1830 bp (1830 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052022
> LD47549.complete GCAAGTGAGAGAACTGATTTAAACCCCTTATCGGCCGATTCGTGAGCAGG TCGGGGCGATAATAAGAATATAAGAATACATATACATAAGCTGAATAAGC AAAGCAACCACTGACAATTCGATCGCTTTTCAGTCGAATCAGCGCAGTTG AACAATGAAAACTGCAACTCATTGCGCATTTTTAATTATCGCGACTATAG TCGCAATAAGCGGAGCAAAAGGAGTAGAGGGGGAACGCCCCTACAGGCGG AGCTTCATCAATCCGTATCCACGCTACCAGTTCTTTGACGATGGTGTCGA TCCCGGGGAGCCCCTGTTCCTGACGCCCCTGATCAACAATGCTTCGATGA GCAAGCAAGAGGTTCAAAAGCTGGCCCGCGTCGTAGGCTCCCAGTTCCAT GGCGTTGAGAGCTACTCCGGCTATTTGACCGTGGACCCTGGCTTCAAATC CAACATGTTCTTCTGGTACTTCCCCGCCGAGCAGGAGCCGGAATATGCGC CAGTGGTCCTGTGGCTTCAGGGTGGACCAGGTGCCTCCTCGCTCTTCGGT TTGTTCACAGAGAATGGACCACTAGAGTTGGATGGTCATGGGAAGCTTCA GAAACGCAACTATACCTGGAGCAAGACACACAATCTCATCTACATTGACA ATCCCGTGGGCACTGGCTTTAGTTTTACAGAGAACGATGCCGGCTATGCT ACGAACGAGAAGGATGTGGGCCGCAATCTGCACGAGGCTGTGATGCAGCT GTACGAACTCTTCGAGTGGAGCAACTCCTCTGGTTTCTGGGTCACCGGCG AGTCCTATGCCGGAAAATACGTTCCCGCCCTGGCTTACCACATCCACAAG GTACAAAATGCCATAGAGACCCGCGTCTATGTGCCGCTCAAGGGCGTGGC CATCGGAAATGGTCTCTCGGATCCGCTGCATCAGCTGAAGTACGGTGACT ATCTCTACCAGCTGGGCCTGATCGACGAGCACGGACTGCAGAGTTTCCAC GATGCCGAGGCAAAGGGTGCTGAATGCATTAAGAGTCACGACATGGAGTG CGCCTTCGACGTATTTGATTCCCTAATCAACGGGGACCTTACCAATGGCT CACTGTTCAGCAACCTTACTGGATACAACTGGTACTACAACTACTTGAAG ACGCATGATGATGATGGCGCCAACTTGGGCGAATTTCTGCAGGCGGGCGC CACTCGGCGGGCAATTCATGTGGGCAATAAGACATTCCATGATCTGGACA AGGAGAACAAGGTGGAACTTCACTTGAAGAAGGATATCATGGACTCGGTG GCCCCGTGGATAGCCGAACTGCTGGCCCACTATACTGTGTGCATCTACAG CGGGCAGCTAGACATTATTGTTGCCTATCCACTGACGCGCAATTATCTCA ACCAACTAAAGTTCCCCGGCTCGGACAAGTACAAGGTGGCTCCCCGCGAA GTGTGGCGCGTTGGGAAGGAAGTGGCCGGCTATGTCAAGCACGCCGGACA TCTTGTGGAGATCATGGTCCGCAATGCCGGGCACATGGCTCCTCACGATC AGCCCAAGTGGCTGTACATGATGATTGATCACCTTACTCATTACAAGCAC TAGGAAATGCGTACTTAAACTATTCAGTACAATTTGGAGACCAAATTTAA GCCTTTGTTTTTAAAATTAATCATGAATAATTTGGTGTGAGTTTTGAATG CATAAATATGTTGATGAGAGCATTGGGTTGTTAATACTCAACTAAATTCA TATAATTTGTTACAGAACTGTATATAACAACAAAGATTAAAACATCAAAA AGAAAATCAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4572-RB | 1876 | CG4572-RB | 69..1876 | 1..1808 | 9040 | 100 | Plus |
CG4572-RD | 1796 | CG4572-RD | 111..1795 | 132..1816 | 8410 | 99.9 | Plus |
CG4572-RA | 1820 | CG4572-RA | 143..1820 | 131..1808 | 8390 | 100 | Plus |
CG4572-RA | 1820 | CG4572-RA | 97..145 | 1..49 | 245 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 15686430..15688237 | 1808..1 | 9040 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 19862509..19864324 | 1816..1 | 9065 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 19603340..19605155 | 1816..1 | 9065 | 99.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 15686430..15688237 | 1..1808 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4572-RC | 1..1449 | 155..1603 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4572-RD | 1..1449 | 155..1603 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4572-RA | 1..1449 | 155..1603 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4572-RC | 1..1449 | 155..1603 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4572-RA | 1..1449 | 155..1603 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4572-RB | 69..1876 | 1..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4572-RB | 69..1876 | 1..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4572-RB | 70..1877 | 1..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4572-RB | 69..1876 | 1..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4572-RB | 70..1877 | 1..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19862517..19864324 | 1..1808 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19862517..19864324 | 1..1808 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19862517..19864324 | 1..1808 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 15688239..15690046 | 1..1808 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19603348..19605155 | 1..1808 | 100 | Minus |
Translation from 154 to 1602
> LD47549.pep MKTATHCAFLIIATIVAISGAKGVEGERPYRRSFINPYPRYQFFDDGVDP GEPLFLTPLINNASMSKQEVQKLARVVGSQFHGVESYSGYLTVDPGFKSN MFFWYFPAEQEPEYAPVVLWLQGGPGASSLFGLFTENGPLELDGHGKLQK RNYTWSKTHNLIYIDNPVGTGFSFTENDAGYATNEKDVGRNLHEAVMQLY ELFEWSNSSGFWVTGESYAGKYVPALAYHIHKVQNAIETRVYVPLKGVAI GNGLSDPLHQLKYGDYLYQLGLIDEHGLQSFHDAEAKGAECIKSHDMECA FDVFDSLINGDLTNGSLFSNLTGYNWYYNYLKTHDDDGANLGEFLQAGAT RRAIHVGNKTFHDLDKENKVELHLKKDIMDSVAPWIAELLAHYTVCIYSG QLDIIVAYPLTRNYLNQLKFPGSDKYKVAPREVWRVGKEVAGYVKHAGHL VEIMVRNAGHMAPHDQPKWLYMMIDHLTHYKH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17355-PA | 478 | GF17355-PA | 1..478 | 1..482 | 2318 | 88.4 | Plus |
Dana\GF24074-PA | 439 | GF24074-PA | 30..438 | 89..480 | 378 | 27.6 | Plus |
Dana\GF14968-PA | 428 | GF14968-PA | 40..427 | 90..480 | 376 | 27.2 | Plus |
Dana\GF14967-PA | 430 | GF14967-PA | 35..424 | 89..480 | 362 | 30 | Plus |
Dana\GF24075-PA | 446 | GF24075-PA | 37..445 | 93..480 | 355 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15819-PA | 482 | GG15819-PA | 1..482 | 1..482 | 2499 | 95.2 | Plus |
Dere\GG14645-PA | 439 | GG14645-PA | 30..438 | 89..480 | 408 | 28.9 | Plus |
Dere\GG24186-PA | 427 | GG24186-PA | 33..426 | 83..480 | 360 | 26.5 | Plus |
Dere\GG24185-PA | 425 | GG24185-PA | 30..419 | 89..480 | 351 | 29.2 | Plus |
Dere\GG14646-PA | 446 | GG14646-PA | 35..445 | 89..480 | 350 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21639-PA | 479 | GH21639-PA | 1..479 | 1..482 | 2091 | 80.5 | Plus |
Dgri\GH16039-PA | 442 | GH16039-PA | 33..428 | 89..467 | 379 | 28.6 | Plus |
Dgri\GH11350-PA | 665 | GH11350-PA | 277..664 | 89..480 | 372 | 29 | Plus |
Dgri\GH16040-PA | 446 | GH16040-PA | 36..445 | 89..480 | 340 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4572-PD | 482 | CG4572-PD | 1..482 | 1..482 | 2612 | 100 | Plus |
CG4572-PB | 482 | CG4572-PB | 1..482 | 1..482 | 2612 | 100 | Plus |
CG4572-PA | 482 | CG4572-PA | 1..482 | 1..482 | 2612 | 100 | Plus |
CG32483-PA | 439 | CG32483-PA | 17..438 | 82..480 | 414 | 29 | Plus |
CG31821-PB | 427 | CG31821-PB | 32..421 | 89..480 | 393 | 30.7 | Plus |
CG31821-PA | 427 | CG31821-PA | 32..421 | 89..480 | 393 | 30.7 | Plus |
CG31823-PA | 427 | CG31823-PA | 33..426 | 83..480 | 391 | 27.7 | Plus |
hiro-PA | 446 | CG3344-PA | 35..445 | 89..480 | 366 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20092-PA | 478 | GI20092-PA | 1..477 | 1..481 | 2031 | 78.8 | Plus |
Dmoj\GI19272-PA | 470 | GI19272-PA | 1..467 | 1..479 | 1605 | 61.9 | Plus |
Dmoj\GI12303-PA | 442 | GI12303-PA | 34..441 | 89..480 | 390 | 29.7 | Plus |
Dmoj\GI12302-PA | 442 | GI12302-PA | 33..441 | 89..480 | 388 | 28.1 | Plus |
Dmoj\GI12304-PA | 450 | GI12304-PA | 34..442 | 89..480 | 382 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15326-PA | 426 | GL15326-PA | 65..425 | 116..480 | 377 | 28.2 | Plus |
Dper\GL20838-PA | 445 | GL20838-PA | 35..444 | 89..480 | 367 | 28.1 | Plus |
Dper\GL20837-PA | 439 | GL20837-PA | 30..438 | 89..480 | 364 | 27.5 | Plus |
Dper\GL15319-PA | 415 | GL15319-PA | 33..414 | 89..480 | 363 | 27 | Plus |
Dper\GL15325-PA | 426 | GL15325-PA | 11..421 | 70..480 | 353 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18267-PA | 483 | GA18267-PA | 1..483 | 1..482 | 2328 | 89 | Plus |
Dpse\GA16505-PA | 426 | GA16505-PA | 65..425 | 116..480 | 377 | 28.2 | Plus |
Dpse\GA16937-PA | 439 | GA16937-PA | 30..438 | 89..480 | 364 | 27.5 | Plus |
Dpse\GA17392-PA | 445 | GA17392-PA | 35..444 | 89..480 | 362 | 27.9 | Plus |
Dpse\GA16504-PA | 426 | GA16504-PA | 11..421 | 70..480 | 353 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26891-PA | 482 | GM26891-PA | 1..482 | 1..482 | 2534 | 97.1 | Plus |
Dsec\GM17924-PA | 427 | GM17924-PA | 33..426 | 83..480 | 385 | 27.8 | Plus |
Dsec\GM14261-PA | 446 | GM14261-PA | 35..445 | 89..480 | 375 | 29.4 | Plus |
Dsec\GM17923-PA | 425 | GM17923-PA | 30..419 | 89..480 | 364 | 29.5 | Plus |
Dsec\GM14260-PA | 262 | GM14260-PA | 30..160 | 89..221 | 219 | 40.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20098-PA | 482 | GD20098-PA | 1..482 | 1..482 | 2542 | 97.7 | Plus |
Dsim\GD13517-PA | 439 | GD13517-PA | 30..438 | 89..480 | 409 | 29.2 | Plus |
Dsim\GD13518-PA | 446 | GD13518-PA | 35..445 | 89..480 | 378 | 29.1 | Plus |
Dsim\GD11968-PA | 285 | GD11968-PA | 18..284 | 213..480 | 235 | 27.2 | Plus |
Dsim\GD21932-PA | 123 | GD21932-PA | 37..122 | 395..480 | 154 | 37.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19859-PA | 479 | GJ19859-PA | 1..479 | 1..482 | 2134 | 80.7 | Plus |
Dvir\GJ22150-PA | 481 | GJ22150-PA | 1..479 | 1..480 | 1892 | 71.1 | Plus |
Dvir\GJ13239-PA | 442 | GJ13239-PA | 33..441 | 89..480 | 398 | 28.6 | Plus |
Dvir\GJ13240-PA | 444 | GJ13240-PA | 34..443 | 89..480 | 367 | 29.5 | Plus |
Dvir\GJ18041-PA | 478 | GJ18041-PA | 90..477 | 89..480 | 347 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22811-PA | 481 | GK22811-PA | 1..481 | 1..482 | 2224 | 83.9 | Plus |
Dwil\GK16683-PA | 445 | GK16683-PA | 34..444 | 89..480 | 408 | 29.4 | Plus |
Dwil\GK24263-PA | 426 | GK24263-PA | 35..425 | 90..480 | 384 | 29.3 | Plus |
Dwil\GK16682-PA | 442 | GK16682-PA | 33..441 | 89..480 | 362 | 27.4 | Plus |
Dwil\GK24262-PA | 428 | GK24262-PA | 15..420 | 73..480 | 345 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25110-PA | 482 | GE25110-PA | 1..482 | 1..482 | 2471 | 94.2 | Plus |
Dyak\GE21005-PA | 439 | GE21005-PA | 30..438 | 89..480 | 411 | 28.9 | Plus |
Dyak\GE19379-PA | 427 | GE19379-PA | 66..426 | 116..480 | 391 | 28.6 | Plus |
Dyak\GE19378-PA | 425 | GE19378-PA | 30..419 | 89..480 | 363 | 30.1 | Plus |
Dyak\GE21006-PA | 446 | GE21006-PA | 35..445 | 89..480 | 355 | 28.4 | Plus |
Translation from 154 to 1602
> LD47549.hyp MKTATHCAFLIIATIVAISGAKGVEGERPYRRSFINPYPRYQFFDDGVDP GEPLFLTPLINNASMSKQEVQKLARVVGSQFHGVESYSGYLTVDPGFKSN MFFWYFPAEQEPEYAPVVLWLQGGPGASSLFGLFTENGPLELDGHGKLQK RNYTWSKTHNLIYIDNPVGTGFSFTENDAGYATNEKDVGRNLHEAVMQLY ELFEWSNSSGFWVTGESYAGKYVPALAYHIHKVQNAIETRVYVPLKGVAI GNGLSDPLHQLKYGDYLYQLGLIDEHGLQSFHDAEAKGAECIKSHDMECA FDVFDSLINGDLTNGSLFSNLTGYNWYYNYLKTHDDDGANLGEFLQAGAT RRAIHVGNKTFHDLDKENKVELHLKKDIMDSVAPWIAELLAHYTVCIYSG QLDIIVAYPLTRNYLNQLKFPGSDKYKVAPREVWRVGKEVAGYVKHAGHL VEIMVRNAGHMAPHDQPKWLYMMIDHLTHYKH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4572-PD | 482 | CG4572-PD | 1..482 | 1..482 | 2612 | 100 | Plus |
CG4572-PB | 482 | CG4572-PB | 1..482 | 1..482 | 2612 | 100 | Plus |
CG4572-PA | 482 | CG4572-PA | 1..482 | 1..482 | 2612 | 100 | Plus |
CG32483-PA | 439 | CG32483-PA | 17..438 | 82..480 | 414 | 29 | Plus |
CG31821-PB | 427 | CG31821-PB | 32..421 | 89..480 | 393 | 30.7 | Plus |