Clone LD47550 Report

Search the DGRC for LD47550

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:475
Well:50
Vector:pOT2
Associated Gene/TranscriptCG1671-RA
Protein status:LD47550.pep: gold
Preliminary Size:2532
Sequenced Size:2521

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1671 2003-01-01 Sim4 clustering to Release 3
CG1671 2003-02-17 Blastp of sequenced clone
CG1671 2008-04-29 Release 5.5 accounting
CG1671 2008-08-15 Release 5.9 accounting
CG1671 2008-12-18 5.12 accounting

Clone Sequence Records

LD47550.complete Sequence

2521 bp (2521 high quality bases) assembled on 2003-02-17

GenBank Submission: BT004480

> LD47550.complete
CCGCGGCGCACGCGGTTTTTGTATTTATAAACAACGAAAATCATGCTGGC
GGGTATCAGCGAGAAAAGCTATGCGGCGGAGGCCCGCTACACGAACTTCT
ACGCCGGCGGCGACATCGCCTGGAGCCCGAATGGCCATCATCTTTACTGC
CTCAATGGCTCAGCTGTAAACCAGGTGGATGTGCAGACCTCCCAAATCCT
AAATAGCTACGGCTTGTCTTCCCCGTCGGCGGATAACAAGAGGCCGGCGG
AGCTGGACAATATCGATGTGGAGGAGGATACGATTACTTGCTTCGGGCTG
TCACAGGAGCATCTGGTTACTGCCCATCGAAGTGGCCTGCTTAGGCTGTG
GCAGCTGGACACTGGGAAGCTGGTGAAGCTGTGGAAGGCGCAGCACAAGG
GACCAGTCATCCGAGTTGAGTTTAGTCCCTGCGGCAGGCTTATCTGCACC
AGCGGCGGTGCAGATGCCACACTGAGGCTGTGGGACTACTCGAACAACAG
CTGTCTGGGTGCCCTCAAGGATTTCCCTGGTCCCGCTTGGCTCCTCGTCT
TTCATCCCAATGTGCTGCGCAAAGAGATCTACGCCGGAGGTTCGGATAAC
ACTGTCTATGCCTGGAACTACGAGACGAAGACACTTGTGCACAAGATGCG
AGGTCACCTGTCGCAAGTCACCGGCTTGAGCTTTAAGAGCAACGCGTCCG
ACTGCAATGAAATCGTGACTGTAAGCCGGGACAAGGTTATGATCGTGTGG
CAATTGCAGGAGCAGTTGGAAAGCAAGCAGTTGAAGGTTCTTCCCTTGTA
CGATGAGCTTGAGGGAGTCGTGTACGCAGACGAGGGACAACTGATAATCG
TGGCGAGCGGATCGGGCAAGCTGCAACAGGTCGACCCTAAATCTTGGAAG
ATCAGGGATATTCTTTCTCAATCTGATTTCCAAATTAGTAGACTGCTGCA
CTGCAGCGAGCTAAAACAGCTGGCCCTGGTCACTACAGAGCAGAATATTT
TGGTCTACGACGTTGAAACCCTGGAACCCATTAAACACTTGGTGGGTTAC
AACGACGAGATCCTAGACATGTGCTTTATGGGCGAACACGATCGCTACCT
GGCCGTTGCCACCAACAGCAAGCACTTCAAGCTGTACGACACGGAACACG
ACATGAATTGCAAGCTGATCGTGGGTCACTCGGATACGGTAATGTCCCTT
GCTGCATCCCAAAATCTGCTGATTTCGGTGGGAAAGGACTGCAGCGTTCG
GCTTTGGAGGCTTCAGCACGACAAAGATTGCTCGCTTGAGGCTCTGACTC
AACAGGCCAACTGCCACACGTCCACTATCGGTTGCGTGGCCATGACGCAC
AACGGAGCTACTGGCTTTGCATCCGTGAGCCAAGATGGCAGCATGAAGGT
ATGGCAGCTCGTCAGAAGTAAGGAGGATCGCAACTCGTACTCTTTCAACC
TGCGCTACGCAGCGCTTTCCCACGACAAGGAGGTGAACTGCGTTGCATAT
GCTCCGAATAACAAGCTTATTGCTACCGCGTCGCAAGACAAGACGGCTAA
GGTGTGGCTGGCGGAGTCCAACACGCTGCAAGGAGTGTTGCGGGGACACA
CCCGCGGTGTGTGGAGTGTGCGCTTCTCTCCGGTGGATCAGATCGTGCTC
ACCTCATCGTCGGACTGTACTCTCCGCATCTGGTCCATCAGCAATTTTTC
GTGCATAAAACGTTTCGATCAGGAGTGCACCATACTGAGAGCCGAGTTCC
TGGATCACGGCAAGTTCATTATCTCCGCTGCTTCGGATGGCCTTCTTAAG
CTGTGGAATATCAAGACCAACACATGTCTGCAGTCCCTGGACGAGCACAA
CGATAGGGTTTGGGCGCTGGCCGTATCCGCCAGGAGCAATCGGTTCTTTT
ACACCGGCGGCGCGGACTCCAAGCTGATTCGCTTCGGTGATGTCACTCAG
GTGACGCGAAACGAAGCGCTGGACAAGCGGCAGGCCGCATTGGAGCAGGA
GCAGACCCTACATTCCCTTCTGCACGCCCAGAAGCAGCTTCACAAGGCCT
TCGTGTTGGCTCTGAACCTGGACAAGCCCAAAGCCAGTTTCGATATTATC
AACCACTTTGTCCGCAAGCGAGATGAGCCCGGTCTCCGGCAATTGGTTGA
CCAGTTGAACGTTGACCAGCGGGTTGCGCTGCTGCAGCACGTCAAGGCAT
GGACCACCAACTCGCGCCATTCGCAGGCGGGCAACATGATCCTCAAGTAC
TTGATCGGAGATGCTCTTCTGGATCCCAAGGCGAGGTTCTACTACAATGG
CAACATGGTCGAGGTACTCACTCCGTACGTCCAGAGACACTTTAAGCGGG
TCACCGAGCTGAACAAGGATCTGGCTTTCCTAGAGTTCATTGTCAAGTGC
ATGTAGGCTTTAGCTTCGGAGCCGTTTCATTCATGATTGTTAACTTAATT
CAGTTTAATTAATTTTAGGAAAAAAATAAAGTAGATAACCATACATTACA
TAAAAAAAAAAAAAAAAAAAA

LD47550.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:19:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG1671-RA 2741 CG1671-RA 65..2566 1..2502 12510 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:12:43
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 5735687..5738121 67..2501 11965 99.4 Plus
chr2R 21145070 chr2R 5735562..5735629 1..68 340 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:44:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:12:41
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9848208..9850643 67..2502 12180 100 Plus
2R 25286936 2R 9848083..9848150 1..68 340 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:58:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 9849407..9851842 67..2502 12180 100 Plus
2R 25260384 2R 9849282..9849349 1..68 340 100 Plus
Blast to na_te.dros performed on 2019-03-16 11:12:42 has no hits.

LD47550.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:13:40 Download gff for LD47550.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 5735562..5735629 1..68 100 -> Plus
chr2R 5735689..5738121 69..2501 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:31:39 Download gff for LD47550.complete
Subject Subject Range Query Range Percent Splice Strand
CG1671-RA 1..2364 43..2406 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:49:58 Download gff for LD47550.complete
Subject Subject Range Query Range Percent Splice Strand
CG1671-RA 1..2364 43..2406 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 13:03:51 Download gff for LD47550.complete
Subject Subject Range Query Range Percent Splice Strand
CG1671-RA 1..2364 43..2406 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:41:13 Download gff for LD47550.complete
Subject Subject Range Query Range Percent Splice Strand
CG1671-RA 1..2364 43..2406 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:29:55 Download gff for LD47550.complete
Subject Subject Range Query Range Percent Splice Strand
CG1671-RA 1..2364 43..2406 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:02:50 Download gff for LD47550.complete
Subject Subject Range Query Range Percent Splice Strand
CG1671-RA 23..2523 1..2501 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:49:58 Download gff for LD47550.complete
Subject Subject Range Query Range Percent Splice Strand
CG1671-RA 21..2521 1..2501 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:03:51 Download gff for LD47550.complete
Subject Subject Range Query Range Percent Splice Strand
CG1671-RA 23..2523 1..2501 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:41:13 Download gff for LD47550.complete
Subject Subject Range Query Range Percent Splice Strand
CG1671-RA 23..2523 1..2501 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:29:55 Download gff for LD47550.complete
Subject Subject Range Query Range Percent Splice Strand
CG1671-RA 23..2523 1..2501 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:13:40 Download gff for LD47550.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9848210..9850642 69..2501 100   Plus
2R 9848083..9848150 1..68 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:13:40 Download gff for LD47550.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9848210..9850642 69..2501 100   Plus
2R 9848083..9848150 1..68 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:13:40 Download gff for LD47550.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9848210..9850642 69..2501 100   Plus
2R 9848083..9848150 1..68 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:03:51 Download gff for LD47550.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5735588..5735655 1..68 100 -> Plus
arm_2R 5735715..5738147 69..2501 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:11:44 Download gff for LD47550.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9849409..9851841 69..2501 100   Plus
2R 9849282..9849349 1..68 100 -> Plus

LD47550.pep Sequence

Translation from 42 to 2405

> LD47550.pep
MLAGISEKSYAAEARYTNFYAGGDIAWSPNGHHLYCLNGSAVNQVDVQTS
QILNSYGLSSPSADNKRPAELDNIDVEEDTITCFGLSQEHLVTAHRSGLL
RLWQLDTGKLVKLWKAQHKGPVIRVEFSPCGRLICTSGGADATLRLWDYS
NNSCLGALKDFPGPAWLLVFHPNVLRKEIYAGGSDNTVYAWNYETKTLVH
KMRGHLSQVTGLSFKSNASDCNEIVTVSRDKVMIVWQLQEQLESKQLKVL
PLYDELEGVVYADEGQLIIVASGSGKLQQVDPKSWKIRDILSQSDFQISR
LLHCSELKQLALVTTEQNILVYDVETLEPIKHLVGYNDEILDMCFMGEHD
RYLAVATNSKHFKLYDTEHDMNCKLIVGHSDTVMSLAASQNLLISVGKDC
SVRLWRLQHDKDCSLEALTQQANCHTSTIGCVAMTHNGATGFASVSQDGS
MKVWQLVRSKEDRNSYSFNLRYAALSHDKEVNCVAYAPNNKLIATASQDK
TAKVWLAESNTLQGVLRGHTRGVWSVRFSPVDQIVLTSSSDCTLRIWSIS
NFSCIKRFDQECTILRAEFLDHGKFIISAASDGLLKLWNIKTNTCLQSLD
EHNDRVWALAVSARSNRFFYTGGADSKLIRFGDVTQVTRNEALDKRQAAL
EQEQTLHSLLHAQKQLHKAFVLALNLDKPKASFDIINHFVRKRDEPGLRQ
LVDQLNVDQRVALLQHVKAWTTNSRHSQAGNMILKYLIGDALLDPKARFY
YNGNMVEVLTPYVQRHFKRVTELNKDLAFLEFIVKCM*

LD47550.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:48:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11768-PA 792 GF11768-PA 1..792 1..787 3702 85.1 Plus
Dana\GF18514-PA 510 GF18514-PA 232..496 362..641 239 28.2 Plus
Dana\GF10412-PA 403 GF10412-PA 17..184 436..601 227 30.8 Plus
Dana\GF23871-PA 1276 GF23871-PA 938..1215 331..634 227 25.6 Plus
Dana\GF14879-PA 489 GF14879-PA 116..487 202..588 215 21.6 Plus
Dana\GF10412-PA 403 GF10412-PA 14..259 376..636 171 26.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:48:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24111-PA 787 GG24111-PA 1..787 1..787 4064 95.6 Plus
Dere\GG14860-PA 510 GG14860-PA 232..496 362..641 241 28.2 Plus
Dere\GG14203-PA 1329 GG14203-PA 991..1268 331..634 226 25.6 Plus
Dere\GG24639-PA 488 GG24639-PA 115..486 161..588 218 21.7 Plus
Dere\GG13777-PA 390 GG13777-PA 9..184 417..601 204 26.3 Plus
Dere\GG13777-PA 390 GG13777-PA 14..295 376..629 179 24.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:48:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20562-PA 790 GH20562-PA 1..790 5..787 3100 71.1 Plus
Dgri\GH15796-PA 510 GH15796-PA 232..496 362..641 239 28.6 Plus
Dgri\anon-2-PA 1411 GH15539-PA 1073..1350 331..634 225 25.6 Plus
Dgri\GH14795-PA 404 GH14795-PA 10..185 417..601 213 29 Plus
Dgri\GH24921-PA 357 GH24921-PA 67..240 425..606 206 28.3 Plus
Dgri\GH24921-PA 357 GH24921-PA 57..200 467..609 202 27.1 Plus
Dgri\GH14795-PA 404 GH14795-PA 15..260 376..636 189 26.5 Plus
Dgri\GH24921-PA 357 GH24921-PA 64..294 376..623 188 24.6 Plus
Dgri\GH24921-PA 357 GH24921-PA 64..352 333..631 186 23.2 Plus
Dgri\GH24921-PA 357 GH24921-PA 209..327 91..209 170 34.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG1671-PA 787 CG1671-PA 1..787 1..787 4122 100 Plus
slmb-PB 597 CG3412-PB 233..522 363..667 250 27.6 Plus
ago-PA 1326 CG15010-PA 988..1265 331..634 250 24.9 Plus
ago-PB 1326 CG15010-PB 988..1265 331..634 250 24.9 Plus
ago-PC 1326 CG15010-PC 988..1265 331..634 250 24.9 Plus
slmb-PC 510 CG3412-PC 233..496 363..641 244 28.7 Plus
slmb-PA 510 CG3412-PA 233..496 363..641 244 28.7 Plus
Lis-1-PG 411 CG8440-PG 51..411 242..591 221 24 Plus
Lis-1-PF 411 CG8440-PF 51..411 242..591 221 24 Plus
Lis-1-PB 411 CG8440-PB 51..411 242..591 221 24 Plus
Lis-1-PA 411 CG8440-PA 51..411 242..591 221 24 Plus
Nle-PA 488 CG2863-PA 136..486 181..588 221 21.2 Plus
CG9062-PB 668 CG9062-PB 34..275 384..629 221 24.8 Plus
CG9062-PC 680 CG9062-PC 34..275 384..629 221 24.8 Plus
wds-PB 361 CG17437-PB 71..244 425..606 212 27.7 Plus
wds-PA 361 CG17437-PA 71..244 425..606 212 27.7 Plus
wds-PB 361 CG17437-PB 61..204 467..609 210 27.1 Plus
wds-PA 361 CG17437-PA 61..204 467..609 210 27.1 Plus
CG3909-PA 331 CG3909-PA 49..310 387..617 206 24.3 Plus
Poc1-PA 391 CG10191-PA 17..184 436..601 205 27.9 Plus
Poc1-PB 403 CG10191-PB 17..184 436..601 205 27.9 Plus
Lis-1-PG 411 CG8440-PG 122..368 392..634 204 25 Plus
Lis-1-PF 411 CG8440-PF 122..368 392..634 204 25 Plus
Lis-1-PB 411 CG8440-PB 122..368 392..634 204 25 Plus
Lis-1-PA 411 CG8440-PA 122..368 392..634 204 25 Plus
Rack1-PC 318 CG7111-PC 11..248 376..619 203 27.7 Plus
Rack1-PD 318 CG7111-PD 11..248 376..619 203 27.7 Plus
Rack1-PA 318 CG7111-PA 11..248 376..619 203 27.7 Plus
can-PA 942 CG6577-PA 645..853 446..660 203 26.8 Plus
wds-PB 361 CG17437-PB 68..298 376..623 201 24.6 Plus
wds-PA 361 CG17437-PA 68..298 376..623 201 24.6 Plus
Lis-1-PG 411 CG8440-PG 126..380 356..602 198 23.7 Plus
Lis-1-PF 411 CG8440-PF 126..380 356..602 198 23.7 Plus
Lis-1-PB 411 CG8440-PB 126..380 356..602 198 23.7 Plus
Lis-1-PA 411 CG8440-PA 126..380 356..602 198 23.7 Plus
wda-PA 743 CG4448-PA 495..695 378..591 196 28.1 Plus
wds-PB 361 CG17437-PB 86..341 352..616 195 24.3 Plus
wds-PA 361 CG17437-PA 86..341 352..616 195 24.3 Plus
CG3909-PA 331 CG3909-PA 55..330 179..512 195 23.4 Plus
CG30116-PB 1698 CG30116-PB 908..1444 87..629 195 20.4 Plus
CG30116-PC 1698 CG30116-PC 908..1444 87..629 195 20.4 Plus
CG30116-PD 1701 CG30116-PD 908..1444 87..629 195 20.4 Plus
CG30116-PA 1922 CG30116-PA 908..1444 87..629 195 20.4 Plus
CG7568-PD 467 CG7568-PD 233..466 303..547 188 25.4 Plus
CG7568-PE 482 CG7568-PE 233..466 303..547 188 25.4 Plus
CG3436-PC 347 CG3436-PC 47..347 329..636 185 21.6 Plus
CG3436-PA 347 CG3436-PA 47..347 329..636 185 21.6 Plus
Taf5-PA 704 CG7704-PA 342..601 401..629 184 23.3 Plus
CG8064-PA 922 CG8064-PA 169..793 134..719 184 20.6 Plus
Poc1-PA 391 CG10191-PA 12..295 331..629 182 21.9 Plus
Poc1-PB 403 CG10191-PB 12..295 331..629 182 21.9 Plus
Smu1-PC 509 CG5451-PC 233..384 446..596 182 26.8 Plus
Smu1-PB 509 CG5451-PB 233..384 446..596 182 26.8 Plus
Smu1-PA 509 CG5451-PA 233..384 446..596 182 26.8 Plus
Lis-1-PG 411 CG8440-PG 101..304 471..680 180 22.2 Plus
Lis-1-PF 411 CG8440-PF 101..304 471..680 180 22.2 Plus
Lis-1-PB 411 CG8440-PB 101..304 471..680 180 22.2 Plus
Lis-1-PA 411 CG8440-PA 101..304 471..680 180 22.2 Plus
beta'COP-PA 914 CG6699-PA 98..256 379..547 180 30.1 Plus
wda-PA 743 CG4448-PA 514..698 444..638 179 25.3 Plus
U4-U6-60K-PA 553 CG6322-PA 248..534 324..615 179 22 Plus
CG10931-PA 345 CG10931-PA 52..281 376..623 177 24.9 Plus
beta'COP-PA 914 CG6699-PA 97..235 476..609 177 30.9 Plus
wds-PB 361 CG17437-PB 213..331 91..209 175 34.2 Plus
wds-PA 361 CG17437-PA 213..331 91..209 175 34.2 Plus
Taf5-PA 704 CG7704-PA 446..646 376..589 175 26.3 Plus
Hira-PA 1047 CG12153-PA 34..238 397..579 173 26.7 Plus
Taf5-PA 704 CG7704-PA 342..642 337..628 172 22.3 Plus
CG10931-PA 345 CG10931-PA 48..314 330..606 170 22.9 Plus
CG7568-PD 467 CG7568-PD 263..448 434..612 167 27.7 Plus
CG7568-PE 482 CG7568-PE 263..448 434..612 167 27.7 Plus
Tango4-PA 482 CG1796-PA 166..399 374..623 164 24.6 Plus
U3-55K-PA 484 CG33505-PA 224..420 305..510 164 24.5 Plus
CG10064-PA 742 CG10064-PA 366..601 379..625 162 23.6 Plus
wds-PB 361 CG17437-PB 180..318 100..241 161 32.2 Plus
wds-PA 361 CG17437-PA 180..318 100..241 161 32.2 Plus
CG3071-PA 535 CG3071-PA 56..318 312..587 161 21.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:48:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18830-PA 797 GI18830-PA 1..797 1..787 3100 70.6 Plus
Dmoj\GI23727-PA 510 GI23727-PA 232..496 362..641 236 28.6 Plus
Dmoj\GI16816-PA 1393 GI16816-PA 1055..1336 331..633 217 24 Plus
Dmoj\GI18023-PA 485 GI18023-PA 115..485 202..587 208 21.3 Plus
Dmoj\GI21774-PA 358 GI21774-PA 68..241 425..606 202 27.7 Plus
Dmoj\GI21774-PA 358 GI21774-PA 58..201 467..609 201 27.1 Plus
Dmoj\GI21774-PA 358 GI21774-PA 65..295 376..623 187 25 Plus
Dmoj\GI21774-PA 358 GI21774-PA 65..353 333..631 184 23.2 Plus
Dmoj\GI21774-PA 358 GI21774-PA 210..328 91..209 169 34.2 Plus
Dmoj\GI18023-PA 485 GI18023-PA 174..485 308..631 167 24.2 Plus
Dmoj\GI16816-PA 1393 GI16816-PA 1061..1333 77..368 162 23.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:48:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10096-PA 787 GL10096-PA 1..787 1..787 3660 84.1 Plus
Dper\GL22031-PA 507 GL22031-PA 229..493 362..641 236 28.6 Plus
Dper\GL21559-PA 413 GL21559-PA 9..184 417..601 226 28 Plus
Dper\GL15696-PA 413 GL15696-PA 9..184 417..601 225 28 Plus
Dper\GL26972-PA 232 GL26972-PA 8..185 416..602 223 27.7 Plus
Dper\GL15696-PA 413 GL15696-PA 14..259 376..636 172 25.4 Plus
Dper\GL21559-PA 413 GL21559-PA 14..295 376..629 161 23.3 Plus
Dper\GL26972-PA 232 GL26972-PA 14..185 376..561 151 27 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:48:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14095-PA 787 GA14095-PA 1..787 1..787 3668 84.1 Plus
Dpse\GA27349-PA 507 GA27349-PA 229..493 362..641 236 28.6 Plus
Dpse\GA25887-PA 482 GA25887-PA 109..480 202..588 226 21.6 Plus
Dpse\GA10144-PA 413 GA10144-PA 9..184 417..601 223 27.4 Plus
Dpse\GA26333-PB 299 GA26333-PB 10..184 418..601 219 27 Plus
Dpse\GA10144-PA 413 GA10144-PA 14..259 376..636 173 25.4 Plus
Dpse\GA26333-PB 299 GA26333-PB 14..259 376..636 167 24.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:48:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24417-PA 787 GM24417-PA 1..787 1..787 4147 97.6 Plus
Dsec\GM15099-PA 510 GM15099-PA 232..496 362..641 239 28.6 Plus
Dsec\GM13994-PA 1325 GM13994-PA 987..1264 331..634 225 25.6 Plus
Dsec\GM16656-PA 488 GM16656-PA 115..486 161..588 216 21.7 Plus
Dsec\GM24599-PA 389 GM24599-PA 9..184 417..601 206 26.9 Plus
Dsec\GM24599-PA 389 GM24599-PA 12..295 331..629 173 21.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:48:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10690-PA 787 GD10690-PA 1..787 1..787 4168 98.1 Plus
Dsim\GD20006-PA 510 GD20006-PA 232..496 362..641 239 28.6 Plus
Dsim\GD13273-PA 1328 GD13273-PA 990..1267 331..634 225 25.6 Plus
Dsim\GD22949-PA 483 GD22949-PA 110..481 161..588 217 21.7 Plus
Dsim\GD12669-PA 389 GD12669-PA 17..184 436..601 205 29.1 Plus
Dsim\GD12669-PA 389 GD12669-PA 14..295 376..629 171 23.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:48:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21857-PA 802 GJ21857-PA 1..802 1..787 3192 72.2 Plus
Dvir\GJ23285-PA 510 GJ23285-PA 232..496 362..641 239 28.6 Plus
Dvir\GJ13548-PA 405 GJ13548-PA 6..181 417..601 222 29 Plus
Dvir\GJ12563-PA 1354 GJ12563-PA 1016..1297 331..633 219 24 Plus
Dvir\GJ19693-PA 488 GJ19693-PA 115..486 161..588 214 20.3 Plus
Dvir\GJ13548-PA 405 GJ13548-PA 11..256 376..636 192 26.5 Plus
Dvir\GJ19693-PA 488 GJ19693-PA 174..485 308..631 177 23.7 Plus
Dvir\GJ12563-PA 1354 GJ12563-PA 1022..1292 77..366 160 23.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:48:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20642-PA 791 GK20642-PA 3..791 1..787 3331 75.6 Plus
Dwil\GK24428-PA 493 GK24428-PA 119..491 161..588 236 22.2 Plus
Dwil\GK13501-PA 512 GK13501-PA 234..470 362..609 234 29.1 Plus
Dwil\GK10570-PA 1242 GK10570-PA 904..1185 331..633 227 24.4 Plus
Dwil\GK11178-PA 453 GK11178-PA 140..452 182..547 208 23.8 Plus
Dwil\GK11178-PA 453 GK11178-PA 122..452 249..588 185 21.7 Plus
Dwil\GK11178-PA 453 GK11178-PA 131..420 338..637 157 24.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:48:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19308-PA 787 GE19308-PA 1..787 1..787 4046 94.9 Plus
Dyak\GE25013-PA 487 GE25013-PA 209..473 362..641 241 28.6 Plus
Dyak\GE20631-PA 1327 GE20631-PA 989..1266 331..634 227 25.6 Plus
Dyak\GE16018-PA 481 GE16018-PA 108..479 161..588 216 21.7 Plus
Dyak\GE20071-PA 391 GE20071-PA 9..184 417..601 205 26.3 Plus
Dyak\GE20071-PA 391 GE20071-PA 14..295 376..629 177 23.7 Plus

LD47550.hyp Sequence

Translation from 42 to 2405

> LD47550.hyp
MLAGISEKSYAAEARYTNFYAGGDIAWSPNGHHLYCLNGSAVNQVDVQTS
QILNSYGLSSPSADNKRPAELDNIDVEEDTITCFGLSQEHLVTAHRSGLL
RLWQLDTGKLVKLWKAQHKGPVIRVEFSPCGRLICTSGGADATLRLWDYS
NNSCLGALKDFPGPAWLLVFHPNVLRKEIYAGGSDNTVYAWNYETKTLVH
KMRGHLSQVTGLSFKSNASDCNEIVTVSRDKVMIVWQLQEQLESKQLKVL
PLYDELEGVVYADEGQLIIVASGSGKLQQVDPKSWKIRDILSQSDFQISR
LLHCSELKQLALVTTEQNILVYDVETLEPIKHLVGYNDEILDMCFMGEHD
RYLAVATNSKHFKLYDTEHDMNCKLIVGHSDTVMSLAASQNLLISVGKDC
SVRLWRLQHDKDCSLEALTQQANCHTSTIGCVAMTHNGATGFASVSQDGS
MKVWQLVRSKEDRNSYSFNLRYAALSHDKEVNCVAYAPNNKLIATASQDK
TAKVWLAESNTLQGVLRGHTRGVWSVRFSPVDQIVLTSSSDCTLRIWSIS
NFSCIKRFDQECTILRAEFLDHGKFIISAASDGLLKLWNIKTNTCLQSLD
EHNDRVWALAVSARSNRFFYTGGADSKLIRFGDVTQVTRNEALDKRQAAL
EQEQTLHSLLHAQKQLHKAFVLALNLDKPKASFDIINHFVRKRDEPGLRQ
LVDQLNVDQRVALLQHVKAWTTNSRHSQAGNMILKYLIGDALLDPKARFY
YNGNMVEVLTPYVQRHFKRVTELNKDLAFLEFIVKCM*

LD47550.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:19:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG1671-PA 787 CG1671-PA 1..787 1..787 4122 100 Plus
slmb-PB 597 CG3412-PB 233..522 363..667 250 27.6 Plus
ago-PA 1326 CG15010-PA 988..1265 331..634 250 24.9 Plus
ago-PB 1326 CG15010-PB 988..1265 331..634 250 24.9 Plus
ago-PC 1326 CG15010-PC 988..1265 331..634 250 24.9 Plus