BDGP Sequence Production Resources |
Search the DGRC for LD47553
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 475 |
Well: | 53 |
Vector: | pOT2 |
Associated Gene/Transcript | mats-RA |
Protein status: | LD47553.pep: gold |
Preliminary Size: | 1351 |
Sequenced Size: | 1268 |
Gene | Date | Evidence |
---|---|---|
CG13852 | 2001-10-10 | Blastp of sequenced clone |
mats | 2008-04-29 | Release 5.5 accounting |
mats | 2008-08-15 | Release 5.9 accounting |
mats | 2008-12-18 | 5.12 accounting |
1268 bp (1268 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061520
> LD47553.complete TCCCTCTCGCACTTTCATCAACTGTCTCTGTGTGTGAAAGCAATTTTATT TTTATTTATAACAAATTTTTTGCGTTTATAAACACAACAGAATTAACTAG TTGGCTCGGCACACTTCCTGGAACCGCTCGCATCAGCTGTTGGGCTACGG CACTAGTTAACAGACCGACCAACTGGAGGCCAGATACAGATACCATCATT GTCATTTCCCAATTGACCAGAGAAAGAAACCTGCTGCGAATTCCAGTCAC TTTTCTTTAATTATTATTCGGCGCTAATTGTGTAAAAATCGGCGGAATAA AGCTGCTGACACGACACAGAAGAGCCGAAAAAGCGGTGTGGCACTCGCCG GAAAAGTCTACGCATAGGAAAATTCCATTGGAGGCTCAGTGAAAGGCGAA GCACAGCAATTGCATGCCATGGACTTCTTGTTCGGTTCCCGTTCCAGCAA GACCTTCAAGCCCAAGAAGAACATCCCGGAAGGCACACACCAATATGATC TCATGAAGCATGCGGCAGCCACGCTGGGATCGGGAAACCTGCGCAATGCA GTGGCCCTTCCAGATGGCGAGGATCTCAACGAGTGGGTGGCCGTTAACAC CGTGGACTTTTTCAACCAGATCAACATGCTGTACGGCACCATCACCGAGT TCTGCACCGAGGAGACCTGTGGCATCATGTCGGCTGGTCCGAAATACGAG TACCACTGGGCCGACGGTTTGACCGTAAAGAAGCCCATCAAGTGCAGCGC GCCCAAGTATATTGACTATCTGATGACTTGGGTGCAGGATCAGCTGGACG ACGAGACCCTGTTTCCCTCCAAGATCGGCGTGCCGTTTCCAAAGAACTTT CACTCCTCCGCCAAGACCATACTGAAGCGTCTGTTCCGCGTGTATGCGCA CATCTACCACCAGCACTTCACAGAGGTGGTGACGCTTGGCGAGGAGGCCC ATCTCAACACGTCCTTCAAGCACTTCATCTTCTTCGTGCAGGAGTTCAAT CTGATTGAGCGGCGCGAACTGGCCCCGCTGCAGGAGCTCATCGACAAGCT GACGGCTAAGGATGAGCGGCAGATATAGGAATCACTGCATGGAGCCGCGA ATTTTCGCGATTCCGGCGGCGGTGGTGGTGGTCTGCGCTTGCAGTTGGAC TTGTGATGAAAGCGCTCTGGCAGACTCGTGTATTACGCTTTAGTTAGTTA CCGCCAATACTTTTATGTTTCGTTCATTGCTTCATGGGGTGCCTCCCACT AAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 18245744..18246394 | 600..1250 | 3240 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 18244710..18245141 | 1..432 | 2130 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 18245516..18245682 | 433..599 | 820 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 22422196..22422864 | 600..1268 | 3300 | 99.6 | Plus |
3R | 32079331 | 3R | 22421171..22421602 | 1..432 | 2160 | 100 | Plus |
3R | 32079331 | 3R | 22421968..22422134 | 433..599 | 835 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 22163027..22163695 | 600..1268 | 3300 | 99.5 | Plus |
3R | 31820162 | 3R | 22162002..22162433 | 1..432 | 2160 | 100 | Plus |
3R | 31820162 | 3R | 22162799..22162965 | 433..599 | 835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 18244710..18245141 | 1..432 | 92 | -> | Plus |
chr3R | 18245516..18245682 | 433..599 | 99 | -> | Plus |
chr3R | 18245744..18246394 | 600..1250 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mats-RA | 1..660 | 419..1078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mats-RA | 1..660 | 419..1078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mats-RA | 1..660 | 419..1078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mats-RA | 1..660 | 419..1078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mats-RA | 1..660 | 419..1078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mats-RA | 17..1266 | 1..1250 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mats-RA | 17..1266 | 1..1250 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mats-RA | 11..1260 | 1..1250 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mats-RA | 17..1266 | 1..1250 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mats-RA | 11..1260 | 1..1250 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22421171..22421602 | 1..432 | 100 | -> | Plus |
3R | 22421968..22422134 | 433..599 | 100 | -> | Plus |
3R | 22422196..22422846 | 600..1250 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22421171..22421602 | 1..432 | 100 | -> | Plus |
3R | 22421968..22422134 | 433..599 | 100 | -> | Plus |
3R | 22422196..22422846 | 600..1250 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22421171..22421602 | 1..432 | 100 | -> | Plus |
3R | 22421968..22422134 | 433..599 | 100 | -> | Plus |
3R | 22422196..22422846 | 600..1250 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 18246893..18247324 | 1..432 | 100 | -> | Plus |
arm_3R | 18247690..18247856 | 433..599 | 100 | -> | Plus |
arm_3R | 18247918..18248568 | 600..1250 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22162002..22162433 | 1..432 | 100 | -> | Plus |
3R | 22162799..22162965 | 433..599 | 100 | -> | Plus |
3R | 22163027..22163677 | 600..1250 | 100 | Plus |
Translation from 418 to 1077
> LD47553.pep MDFLFGSRSSKTFKPKKNIPEGTHQYDLMKHAAATLGSGNLRNAVALPDG EDLNEWVAVNTVDFFNQINMLYGTITEFCTEETCGIMSAGPKYEYHWADG LTVKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFHSSAKT ILKRLFRVYAHIYHQHFTEVVTLGEEAHLNTSFKHFIFFVQEFNLIERRE LAPLQELIDKLTAKDERQI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18448-PA | 221 | GF18448-PA | 3..221 | 1..219 | 1174 | 98.6 | Plus |
Dana\GF15759-PA | 220 | GF15759-PA | 6..215 | 3..211 | 622 | 52.4 | Plus |
Dana\GF24543-PA | 545 | GF24543-PA | 135..313 | 36..216 | 371 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11134-PA | 219 | GG11134-PA | 1..219 | 1..219 | 1184 | 99.5 | Plus |
Dere\GG10099-PA | 220 | GG10099-PA | 6..215 | 3..211 | 626 | 52.9 | Plus |
Dere\GG13915-PA | 542 | GG13915-PA | 131..309 | 36..216 | 371 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13388-PA | 219 | GH13388-PA | 1..219 | 1..219 | 1169 | 98.2 | Plus |
Dgri\GH13517-PA | 220 | GH13517-PA | 15..215 | 12..211 | 608 | 53.2 | Plus |
Dgri\GH16639-PA | 504 | GH16639-PA | 63..241 | 36..216 | 368 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mats-PC | 219 | CG13852-PC | 1..219 | 1..219 | 1169 | 100 | Plus |
mats-PB | 219 | CG13852-PB | 1..219 | 1..219 | 1169 | 100 | Plus |
mats-PA | 219 | CG13852-PA | 1..219 | 1..219 | 1169 | 100 | Plus |
Mob3-PA | 220 | CG4946-PA | 6..215 | 3..211 | 612 | 52.9 | Plus |
Mob2-PC | 431 | CG11711-PC | 31..209 | 36..216 | 360 | 40.3 | Plus |
Mob2-PE | 537 | CG11711-PE | 137..315 | 36..216 | 360 | 40.3 | Plus |
Mob2-PB | 537 | CG11711-PB | 137..315 | 36..216 | 360 | 40.3 | Plus |
Mob2-PD | 566 | CG11711-PD | 166..344 | 36..216 | 360 | 40.3 | Plus |
Mob2-PA | 728 | CG11711-PA | 328..506 | 36..216 | 360 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22385-PA | 219 | GI22385-PA | 1..219 | 1..219 | 1159 | 97.3 | Plus |
Dmoj\GI18135-PA | 221 | GI18135-PA | 7..221 | 1..218 | 619 | 51.6 | Plus |
Dmoj\GI11596-PA | 1030 | GI11596-PA | 138..319 | 36..219 | 365 | 39.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24215-PA | 219 | GL24215-PA | 1..219 | 1..219 | 1169 | 98.2 | Plus |
Dper\GL18994-PA | 220 | GL18994-PA | 11..216 | 8..212 | 613 | 51 | Plus |
Dper\GL22820-PA | 395 | GL22820-PA | 17..125 | 105..216 | 213 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26541-PA | 219 | GA26541-PA | 1..219 | 1..219 | 1169 | 98.2 | Plus |
Dpse\GA11155-PA | 562 | GA11155-PA | 127..305 | 36..216 | 371 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26432-PA | 219 | GM26432-PA | 1..219 | 1..219 | 1187 | 100 | Plus |
Dsec\GM18081-PA | 220 | GM18081-PA | 6..215 | 3..211 | 625 | 52.9 | Plus |
Dsec\GM24744-PA | 564 | GM24744-PA | 130..308 | 36..216 | 370 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20949-PA | 219 | GD20949-PA | 1..219 | 1..219 | 1187 | 100 | Plus |
Dsim\GD23671-PA | 220 | GD23671-PA | 6..216 | 3..212 | 623 | 52.6 | Plus |
Dsim\GD12801-PA | 540 | GD12801-PA | 137..315 | 36..216 | 371 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24418-PA | 221 | GJ24418-PA | 3..221 | 1..219 | 1166 | 97.7 | Plus |
Dvir\GJ14867-PA | 220 | GJ14867-PA | 7..220 | 1..216 | 610 | 50.7 | Plus |
Dvir\GJ11275-PA | 560 | GJ11275-PA | 137..318 | 36..219 | 371 | 39.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13074-PA | 221 | GK13074-PA | 3..221 | 1..219 | 1133 | 95 | Plus |
Dwil\GK17021-PA | 597 | GK17021-PA | 148..326 | 36..216 | 366 | 40.3 | Plus |
Dwil\GK18525-PA | 106 | GK18525-PA | 13..104 | 10..100 | 290 | 55.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10299-PA | 219 | GE10299-PA | 1..219 | 1..219 | 1187 | 100 | Plus |
Dyak\GE18913-PA | 220 | GE18913-PA | 6..215 | 3..211 | 626 | 52.9 | Plus |
Dyak\GE20209-PA | 539 | GE20209-PA | 129..307 | 36..216 | 371 | 40.3 | Plus |
Translation from 418 to 1077
> LD47553.hyp MDFLFGSRSSKTFKPKKNIPEGTHQYDLMKHAAATLGSGNLRNAVALPDG EDLNEWVAVNTVDFFNQINMLYGTITEFCTEETCGIMSAGPKYEYHWADG LTVKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFHSSAKT ILKRLFRVYAHIYHQHFTEVVTLGEEAHLNTSFKHFIFFVQEFNLIERRE LAPLQELIDKLTAKDERQI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mats-PC | 219 | CG13852-PC | 1..219 | 1..219 | 1169 | 100 | Plus |
mats-PB | 219 | CG13852-PB | 1..219 | 1..219 | 1169 | 100 | Plus |
mats-PA | 219 | CG13852-PA | 1..219 | 1..219 | 1169 | 100 | Plus |
Mob3-PA | 220 | CG4946-PA | 6..215 | 3..211 | 612 | 52.9 | Plus |
Mob2-PC | 431 | CG11711-PC | 31..209 | 36..216 | 360 | 40.3 | Plus |