BDGP Sequence Production Resources |
Search the DGRC for LD47602
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 476 |
Well: | 2 |
Vector: | pOT2 |
Associated Gene/Transcript | SH3PX1-RA |
Protein status: | LD47602.pep: gold |
Preliminary Size: | 2145 |
Sequenced Size: | 2129 |
Gene | Date | Evidence |
---|---|---|
CG6757 | 2001-01-01 | Release 2 assignment |
CG6757 | 2001-11-29 | Blastp of sequenced clone |
CG6757 | 2003-01-01 | Sim4 clustering to Release 3 |
SH3PX1 | 2008-04-29 | Release 5.5 accounting |
SH3PX1 | 2008-08-15 | Release 5.9 accounting |
SH3PX1 | 2008-12-18 | 5.12 accounting |
2129 bp (2129 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069705
> LD47602.complete CTTCACACTTGGTGATTCAGAATTAGTAGATATTTCTTGTCTGTTTATGG CCCCTGTGAAGACAGGACTCGAATTAGCGTAAAGGAACGACCAGGAGAGC ACCAAGATGACCTCGTACGTGCGTGCCATGTACGACTTTACCGGGGAGCC GGGCTCCTCGGAGCTCTCCATCGCGACTGGCGACGTGCTCTCGGTGACCC GGAGCGATGTGGGTGAAGGCTGGTGGGAGGGCAAGAATGCCCGTGGCCAG ATTGGCCTCTTCCCGGCTGCGTACGTGGAGGTGATGTCGGCGGCCGAAGC CCAGAAGCTGAGCGCCAGTGGAGCGACGTCGGTGCCACAGGTTCCGGATC CCTTCGCCTCGCCCCCTTTGCCGCGTTACGATCAGACGGCGGATGATGAT GGCAGCAACTGGGATGATGAGGACGATTGGAGCGACGACAATGACACGTA CTCGGAAATTGGTCCAGGTGGCCAGAAGTCTGCGGGACAGTCGGCTCGCG CTGGCGGATTGTCGCATTCCACCAGTGACTACGATAACAAACACCTGCCC ATCGCGCCCAACGATGATACCCAATCACTGGCCTCCGTGGCTGGTGGGAC TGGTGCTGCTGGCACCGTCAAAAAGGGCATGTTCGCCAAAAGTTCCGATT CATATATACTCGGCTTGTCCAGCACCAAGGAGAAGATACCCGAATGCGAG ATGGCCTACATTACACAGGTGGAGGACTCGATCTACCAGTGGACGCAGAA CCATTCGCCCTACTCCGTTGTGGTGGCCAGTCCCAAAAAGGAGTCCAAAT TCAAGGGGATGAAGACGTTCATTGCCTACCAACTGACGCCTAGCTTCAAC AACATATCCGTGTCACGTCGCTACAAGCACTTCGACTGGCTGCACGAACG TTTGGTGGACAAGTTTTGCCTGATTCCGGTGCCACCGCTGCCGGACAAGC AGATCTCCGGCCGCTATGAGGAGCAATTCGTGGAGCATCGACGTGTGCAG CTGCAGGAGTTCGTCGACTGGGTGTGCCGCCATCCGGTGATCTCCAAATG CGAGGTCTGGTACCATTTCCTCACTTGCCGCGACGAGAAGATCTGGAAGT CGGGCAAACGCAAGGCGGAACGGGATCCCTACATGGGCGTCAACTACTGC CTGGCCATCTCGCCGCCGGACAAGAACCTGCTGCACTCTAAGGTGGACGC ACAGGTGGAGCTGGGCACCCAGTTCATACACAGCATGGACGTGGCAGTAC GCAACCTGAACAATATATCCAACGACATGGCCAAGCGCTCCATGTCGCAG AGTAAAAAGGAGTTCCAGCGCATTGGCGACGGACTCTCCGACCTGGCCAA GGCATTGGCCATCGATGAGCGGCGTGCGCCCACCCGAAACGCGGTTCCGC TCTCCGAGAGCGTCGGCCGCATCGGTGGCATCTTTATCGGTATTGGACAG GCCTTTGGCGACCAGCCAAAGCATGATTGGATTCCCCTCTCGGATCGACT TCACATCTACAGGGGCGTTCTCAACTGCTTTCCGGACATCTTCTCCACGC ACAAGGGTGCCATACAGAAGCGAAAGGACTGCGAGAAATTGGCCGGCGAG GGCAGGATGAATAATCCCCAGTTGCACGACGTTAACCGGCGCACAGATGT CGTCTCCTACACGGTGCTGGCCGAGCTGACCCACTTCAAGAGCGAGCGGG ATACGCATTTGAAGCATACGCTTAAGAATTTCATTGCCGAACAGATTAAG TTTTACCAGGGCGTGGTGGCGCGCCTGCAGGAGGCCAGCCGTCAGATTGA GTAGATTGGCCCTTGGCCCATGGCGACGACGACTCATCGCTGAAGAGATC GACGGCTGGGAGCACAAAGAAACCGCACCGGGCACACACTTCCACACAGA GATACATAGCTGAAAACATTCGCACGCGCGCATTTCAAATGCCTTCGAAA GGAACTCTTACTTTAAGCGTGGTTCTAACTAAATGTTAAACAGAAAAAAT ATTACATAATGTTGTTTGTAAGTGAAAAGTTGCGTATTTATACAGAAATT AACTTTTATATGCCTATTATACACTGAACTTGAGATGCAAATATAACTAT ATTTATACAGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 9704777..9705637 | 861..1 | 4245 | 99.5 | Minus |
chr3L | 24539361 | chr3L | 9703340..9703993 | 1513..860 | 3240 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 9702254..9702862 | 2110..1511 | 2825 | 98.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 9712931..9713791 | 861..1 | 4305 | 100 | Minus |
3L | 28110227 | 3L | 9711499..9712152 | 1513..860 | 3270 | 100 | Minus |
3L | 28110227 | 3L | 9710420..9711021 | 2112..1511 | 3010 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 9706031..9706891 | 861..1 | 4305 | 100 | Minus |
3L | 28103327 | 3L | 9704599..9705252 | 1513..860 | 3270 | 100 | Minus |
3L | 28103327 | 3L | 9703520..9704121 | 2112..1511 | 3010 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9702254..9702860 | 1513..2110 | 98 | <- | Minus |
chr3L | 9703341..9703993 | 860..1512 | 99 | <- | Minus |
chr3L | 9704779..9705637 | 1..859 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SH3PX1-RA | 1..1698 | 107..1804 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SH3PX1-RA | 1..1698 | 107..1804 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SH3PX1-RA | 1..1698 | 107..1804 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SH3PX1-RA | 1..1698 | 107..1804 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SH3PX1-RA | 1..1698 | 107..1804 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SH3PX1-RA | 33..2142 | 1..2110 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SH3PX1-RA | 33..2142 | 1..2110 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SH3PX1-RA | 37..2146 | 1..2110 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SH3PX1-RA | 33..2142 | 1..2110 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SH3PX1-RA | 37..2146 | 1..2110 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9710422..9711019 | 1513..2110 | 100 | <- | Minus |
3L | 9711500..9712152 | 860..1512 | 100 | <- | Minus |
3L | 9712933..9713791 | 1..859 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9710422..9711019 | 1513..2110 | 100 | <- | Minus |
3L | 9711500..9712152 | 860..1512 | 100 | <- | Minus |
3L | 9712933..9713791 | 1..859 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9710422..9711019 | 1513..2110 | 100 | <- | Minus |
3L | 9711500..9712152 | 860..1512 | 100 | <- | Minus |
3L | 9712933..9713791 | 1..859 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9703522..9704119 | 1513..2110 | 100 | <- | Minus |
arm_3L | 9704600..9705252 | 860..1512 | 100 | <- | Minus |
arm_3L | 9706033..9706891 | 1..859 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9706033..9706891 | 1..859 | 100 | Minus | |
3L | 9703522..9704119 | 1513..2110 | 100 | <- | Minus |
3L | 9704600..9705252 | 860..1512 | 100 | <- | Minus |
Translation from 106 to 1803
> LD47602.pep MTSYVRAMYDFTGEPGSSELSIATGDVLSVTRSDVGEGWWEGKNARGQIG LFPAAYVEVMSAAEAQKLSASGATSVPQVPDPFASPPLPRYDQTADDDGS NWDDEDDWSDDNDTYSEIGPGGQKSAGQSARAGGLSHSTSDYDNKHLPIA PNDDTQSLASVAGGTGAAGTVKKGMFAKSSDSYILGLSSTKEKIPECEMA YITQVEDSIYQWTQNHSPYSVVVASPKKESKFKGMKTFIAYQLTPSFNNI SVSRRYKHFDWLHERLVDKFCLIPVPPLPDKQISGRYEEQFVEHRRVQLQ EFVDWVCRHPVISKCEVWYHFLTCRDEKIWKSGKRKAERDPYMGVNYCLA ISPPDKNLLHSKVDAQVELGTQFIHSMDVAVRNLNNISNDMAKRSMSQSK KEFQRIGDGLSDLAKALAIDERRAPTRNAVPLSESVGRIGGIFIGIGQAF GDQPKHDWIPLSDRLHIYRGVLNCFPDIFSTHKGAIQKRKDCEKLAGEGR MNNPQLHDVNRRTDVVSYTVLAELTHFKSERDTHLKHTLKNFIAEQIKFY QGVVARLQEASRQIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25132-PA | 559 | GF25132-PA | 1..559 | 1..565 | 2349 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14014-PA | 565 | GG14014-PA | 1..565 | 1..565 | 3045 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15945-PA | 564 | GH15945-PA | 1..564 | 1..565 | 2321 | 79.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SH3PX1-PA | 565 | CG6757-PA | 1..565 | 1..565 | 2991 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16597-PA | 566 | GI16597-PA | 1..566 | 1..565 | 2447 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17876-PA | 561 | GL17876-PA | 1..561 | 1..565 | 2587 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19839-PA | 561 | GA19839-PA | 1..561 | 1..565 | 2587 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24848-PA | 565 | GM24848-PA | 1..565 | 1..565 | 3056 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12900-PA | 565 | GD12900-PA | 1..565 | 1..565 | 3046 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12849-PA | 563 | GJ12849-PA | 1..563 | 1..565 | 2495 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13598-PA | 562 | GK13598-PA | 1..562 | 1..565 | 2391 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21216-PA | 565 | GE21216-PA | 1..565 | 1..565 | 3043 | 99.1 | Plus |
Translation from 106 to 1803
> LD47602.hyp MTSYVRAMYDFTGEPGSSELSIATGDVLSVTRSDVGEGWWEGKNARGQIG LFPAAYVEVMSAAEAQKLSASGATSVPQVPDPFASPPLPRYDQTADDDGS NWDDEDDWSDDNDTYSEIGPGGQKSAGQSARAGGLSHSTSDYDNKHLPIA PNDDTQSLASVAGGTGAAGTVKKGMFAKSSDSYILGLSSTKEKIPECEMA YITQVEDSIYQWTQNHSPYSVVVASPKKESKFKGMKTFIAYQLTPSFNNI SVSRRYKHFDWLHERLVDKFCLIPVPPLPDKQISGRYEEQFVEHRRVQLQ EFVDWVCRHPVISKCEVWYHFLTCRDEKIWKSGKRKAERDPYMGVNYCLA ISPPDKNLLHSKVDAQVELGTQFIHSMDVAVRNLNNISNDMAKRSMSQSK KEFQRIGDGLSDLAKALAIDERRAPTRNAVPLSESVGRIGGIFIGIGQAF GDQPKHDWIPLSDRLHIYRGVLNCFPDIFSTHKGAIQKRKDCEKLAGEGR MNNPQLHDVNRRTDVVSYTVLAELTHFKSERDTHLKHTLKNFIAEQIKFY QGVVARLQEASRQIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SH3PX1-PA | 565 | CG6757-PA | 1..565 | 1..565 | 2991 | 100 | Plus |