BDGP Sequence Production Resources |
Search the DGRC for LD47639
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 476 |
Well: | 39 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8399-RA |
Protein status: | LD47639.pep: gold |
Preliminary Size: | 2420 |
Sequenced Size: | 2363 |
Gene | Date | Evidence |
---|---|---|
CG8399 | 2001-01-01 | Release 2 assignment |
CG8399 | 2002-05-24 | Blastp of sequenced clone |
CG8399 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8399 | 2008-04-29 | Release 5.5 accounting |
CG8399 | 2008-08-15 | Release 5.9 accounting |
CG8399 | 2008-12-18 | 5.12 accounting |
2363 bp (2363 high quality bases) assembled on 2002-05-24
GenBank Submission: AY118595
> LD47639.complete TCGTTGCGTTCGGTTTGGCCATATTCACTCTGTTGATTGGACAAGAAGTA CGGAGCTAACGCAGCTCGGAGTGTTTTTCGAATATTGTTGACGGCGATTT TAGGTGCTCCATTCATAGATGATGCAGGCGCTGACGATGCGGAGTTGGCT GGCAACGCTGGTGACGGCGCTGCTGGCGGTGGCCATCTGGCCGGATCCGG GACAGAGTCTGCCGCAAGGTGCTCCGGAAACCGTGTGCGACACCATGCTG CCGTTCCACTCCGGCGGCAGTGTGCTACCCCAGAACAGTGTGTCGCCCTT CAGCGTGGAGACCTCTTCCTCGACACTTGGCCAGGGTCAGACGCTTCGCG TGGATCTGACGGGTGTGCCGGCGGGCTTAAGCTTCGGTGGCTACATGATC CAGGCGCGCAATCGGAATCCACCCCATCAGATCATCGGACAATTTGGACC CGCCCGCGATGGCACCATTAAGCTAATGAACTGCGAGAACTCCGTGAATA ATTCAGCCACGCATAGCAATGCAGGACCCAAGCAGCAGGTTATCCTGGAG TGGCAATCACCAGTGGACTTTCTCGGCCAGGTGGTCTTCAATGCCACCAT TGCCCAGAGCTACAATGAATTCTGGGTGGGCGTGCCATCTCAGCCCGTTC AGATAGTCCGTCGCGATCTGTCCGCTGCTCCACCACTACCCACACAGAGT CCATCTGCCCCTGCGGGCACCACCCGTGCTCCCTATGTGCCGCCCAGCTA TGTGGCGCCAAACAACGTGGTTGCCGTTTCCTCGGATCCCATCTACAATG GCTGCGGACAGAGCAAGAACTGTTTTGGATTCCCCGACGGTTGCGTGGCG ACGAAGAGCTGTACCTCCATCACTGTGGTCACGGTGCGTGGAGATGTCTT CGAGTTTGAGATTCAGTCCGGCAAGGGAACCAATGCTGCTTACGTGGCAG TTGGTCTTTCTGATGACGCCAAGATGGGTGACGACTTGACCACCGAATGT GTGCCAGAGAATGGCCGGGTTAACCTGTATTCCTCCTTGACTTCGGCCTC TCCTTACTCGGCAGTGAGATCCAATGTGAACCAGAACTCTGCCCGCCTGC TGGACGCCTCCATTGTGGATGGAGTGATCTACTGCCGTGTGCAAAGGGAT GCAGTGACCAATGTGCAGGGACGCACTTTTGATCTTCGCAATGGCAAGTA CCATCTGCTGGTGGCATCCGGCAGCAGCCTTAAGGAGAACAGCGTGGGCT ACCACGACATTGGACGCCTGCCCTCGGCGCAACCGATCAATCTGGCGGAG GTGCAAGACCTGAGTGGTTCTAGCAGACTGCTCATCCAGCTCCACGGTGC CTTCATGATTGCCGCATGGATTGGAACCACCTCGCTGGGCATCATCTTTG CGCGCTACTTCAAGCAGACGTGGGTGGGCAGCCAGAGCTGCGGCACGGAT CAATGGTTCGCCTGGCATCGCCTCCTCATGGTCACCACCTGGTCGCTTAC GGTGGCCGCTTACGTACTCATCTGGGTGGAGCTGAAGCAGGCTGTGTGGC ATGCCCATTCGATAATCGGTCTGATCACGGTGATATTGTGCTTCATTCAA CCCATTGGAGCTCTGTTCCGACCGGGACCCAATGACAAGAAGCGGCCATA CTTCAACTGGGGTCATTGGCTGGGCGGTAACCTGGCCCATATTCTGGGAA TTGTTACCATCTTCTTTTCTGTAAAACTACCAAAGGCCGAGCTGCCCGAG TGGATGGACTGGATCCTGGTCAGCTTCGTGGTGGTGCATGTACTCGTCCA CCTGATATTCTCCATTGGCGGCATGGCCTCGGAGCGTCATCTCAGCCAGC GGGCGAACACTTTCCAAATGGGCGACATGTCCCATCATCAGCAGCACGCC ATGCGGAATGGCATGAGCATGGAGCGGAAGATGGATGCCCCGTATGCGGG CATGCGCAAGGGATTGCTCGGAGTTTACGGCGTGGTGCTGATTCTCTTCG TGACGGTGCTGATCCTGTTGGTGGTGCTGGCGCCCATCGAACAATTCCTG GGAAAGTCCTAGGCCCCCTAATTCGGATGTCCTGTAACCTGTCCCCTTCC AATACTCGTGTCAGTTTTGTGTGCTCATTGTTTAACCCCTTCCGCCCACG GCTCTGCCCTGCCCACCACCCAAATTCCCATCCTTTTTCCATTCAGCTTT GTGTTGTTAAGTGTAATTAGGCGCATGTGTAACCTGGGGCGGAGCGTTCA GTACATGTTATATAATTTATTATTAATAAAATAAAACAAGCCAACATAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8399-RA | 2359 | CG8399-RA | 56..2355 | 1..2300 | 11500 | 100 | Plus |
CG8399.d | 2374 | CG8399.d | 172..2370 | 102..2300 | 10995 | 100 | Plus |
CG8399.c | 2379 | CG8399.c | 49..1867 | 1..1819 | 9080 | 99.9 | Plus |
CG8399.c | 2379 | CG8399.c | 1889..2375 | 1814..2300 | 2435 | 100 | Plus |
CG8399.d | 2374 | CG8399.d | 28..130 | 1..103 | 515 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 11910334..11910956 | 1078..1700 | 3115 | 100 | Plus |
chr2R | 21145070 | chr2R | 11909156..11909645 | 102..591 | 2450 | 100 | Plus |
chr2R | 21145070 | chr2R | 11911541..11911896 | 1942..2297 | 1780 | 100 | Plus |
chr2R | 21145070 | chr2R | 11909713..11910048 | 592..927 | 1680 | 100 | Plus |
chr2R | 21145070 | chr2R | 11910106..11910258 | 926..1078 | 765 | 100 | Plus |
chr2R | 21145070 | chr2R | 11911355..11911483 | 1814..1942 | 645 | 100 | Plus |
chr2R | 21145070 | chr2R | 11911016..11911128 | 1701..1813 | 565 | 100 | Plus |
chr2R | 21145070 | chr2R | 11905024..11905128 | 1..105 | 525 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 16023065..16023687 | 1078..1700 | 3115 | 100 | Plus |
2R | 25286936 | 2R | 16021887..16022376 | 102..591 | 2450 | 100 | Plus |
2R | 25286936 | 2R | 16024272..16024630 | 1942..2300 | 1795 | 100 | Plus |
2R | 25286936 | 2R | 16022444..16022779 | 592..927 | 1680 | 100 | Plus |
2R | 25286936 | 2R | 16022837..16022989 | 926..1078 | 765 | 100 | Plus |
2R | 25286936 | 2R | 16024086..16024214 | 1814..1942 | 645 | 100 | Plus |
2R | 25286936 | 2R | 16023747..16023859 | 1701..1813 | 565 | 100 | Plus |
2R | 25286936 | 2R | 16017755..16017859 | 1..105 | 525 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 16024264..16024886 | 1078..1700 | 3115 | 100 | Plus |
2R | 25260384 | 2R | 16023086..16023575 | 102..591 | 2450 | 100 | Plus |
2R | 25260384 | 2R | 16025471..16025829 | 1942..2300 | 1795 | 100 | Plus |
2R | 25260384 | 2R | 16023643..16023978 | 592..927 | 1680 | 100 | Plus |
2R | 25260384 | 2R | 16024036..16024188 | 926..1078 | 765 | 100 | Plus |
2R | 25260384 | 2R | 16025285..16025413 | 1814..1942 | 645 | 100 | Plus |
2R | 25260384 | 2R | 16024946..16025058 | 1701..1813 | 565 | 100 | Plus |
2R | 25260384 | 2R | 16018954..16019058 | 1..105 | 525 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 11905024..11905126 | 1..103 | 100 | -> | Plus |
chr2R | 11909158..11909645 | 104..591 | 100 | -> | Plus |
chr2R | 11909713..11910047 | 592..926 | 100 | -> | Plus |
chr2R | 11910107..11910258 | 927..1078 | 100 | -> | Plus |
chr2R | 11910335..11910956 | 1079..1700 | 100 | -> | Plus |
chr2R | 11911016..11911128 | 1701..1813 | 100 | -> | Plus |
chr2R | 11911355..11911483 | 1814..1942 | 100 | -> | Plus |
chr2R | 11911542..11911896 | 1943..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8399-RA | 1..1944 | 119..2062 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8399-RA | 1..1944 | 119..2062 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8399-RA | 1..1944 | 119..2062 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8399-RA | 1..1944 | 119..2062 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8399-RA | 1..1944 | 119..2062 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8399-RA | 17..2313 | 1..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8399-RA | 17..2313 | 1..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8399-RA | 19..2315 | 1..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8399-RA | 17..2313 | 1..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8399-RA | 19..2315 | 1..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16017755..16017857 | 1..103 | 100 | -> | Plus |
2R | 16021889..16022376 | 104..591 | 100 | -> | Plus |
2R | 16022444..16022778 | 592..926 | 100 | -> | Plus |
2R | 16022838..16022989 | 927..1078 | 100 | -> | Plus |
2R | 16023066..16023687 | 1079..1700 | 100 | -> | Plus |
2R | 16023747..16023859 | 1701..1813 | 100 | -> | Plus |
2R | 16024086..16024214 | 1814..1942 | 100 | -> | Plus |
2R | 16024273..16024627 | 1943..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16017755..16017857 | 1..103 | 100 | -> | Plus |
2R | 16021889..16022376 | 104..591 | 100 | -> | Plus |
2R | 16022444..16022778 | 592..926 | 100 | -> | Plus |
2R | 16022838..16022989 | 927..1078 | 100 | -> | Plus |
2R | 16023066..16023687 | 1079..1700 | 100 | -> | Plus |
2R | 16023747..16023859 | 1701..1813 | 100 | -> | Plus |
2R | 16024086..16024214 | 1814..1942 | 100 | -> | Plus |
2R | 16024273..16024627 | 1943..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16017755..16017857 | 1..103 | 100 | -> | Plus |
2R | 16021889..16022376 | 104..591 | 100 | -> | Plus |
2R | 16022444..16022778 | 592..926 | 100 | -> | Plus |
2R | 16022838..16022989 | 927..1078 | 100 | -> | Plus |
2R | 16023066..16023687 | 1079..1700 | 100 | -> | Plus |
2R | 16023747..16023859 | 1701..1813 | 100 | -> | Plus |
2R | 16024086..16024214 | 1814..1942 | 100 | -> | Plus |
2R | 16024273..16024627 | 1943..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 11905260..11905362 | 1..103 | 100 | -> | Plus |
arm_2R | 11909394..11909881 | 104..591 | 100 | -> | Plus |
arm_2R | 11909949..11910283 | 592..926 | 100 | -> | Plus |
arm_2R | 11910343..11910494 | 927..1078 | 100 | -> | Plus |
arm_2R | 11910571..11911192 | 1079..1700 | 100 | -> | Plus |
arm_2R | 11911252..11911364 | 1701..1813 | 100 | -> | Plus |
arm_2R | 11911591..11911719 | 1814..1942 | 100 | -> | Plus |
arm_2R | 11911778..11912132 | 1943..2297 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16023088..16023575 | 104..591 | 100 | -> | Plus |
2R | 16023643..16023977 | 592..926 | 100 | -> | Plus |
2R | 16024037..16024188 | 927..1078 | 100 | -> | Plus |
2R | 16024265..16024886 | 1079..1700 | 100 | -> | Plus |
2R | 16024946..16025058 | 1701..1813 | 100 | -> | Plus |
2R | 16025285..16025413 | 1814..1942 | 100 | -> | Plus |
2R | 16025472..16025826 | 1943..2297 | 100 | Plus | |
2R | 16018954..16019056 | 1..103 | 100 | -> | Plus |
Translation from 118 to 2061
> LD47639.pep MMQALTMRSWLATLVTALLAVAIWPDPGQSLPQGAPETVCDTMLPFHSGG SVLPQNSVSPFSVETSSSTLGQGQTLRVDLTGVPAGLSFGGYMIQARNRN PPHQIIGQFGPARDGTIKLMNCENSVNNSATHSNAGPKQQVILEWQSPVD FLGQVVFNATIAQSYNEFWVGVPSQPVQIVRRDLSAAPPLPTQSPSAPAG TTRAPYVPPSYVAPNNVVAVSSDPIYNGCGQSKNCFGFPDGCVATKSCTS ITVVTVRGDVFEFEIQSGKGTNAAYVAVGLSDDAKMGDDLTTECVPENGR VNLYSSLTSASPYSAVRSNVNQNSARLLDASIVDGVIYCRVQRDAVTNVQ GRTFDLRNGKYHLLVASGSSLKENSVGYHDIGRLPSAQPINLAEVQDLSG SSRLLIQLHGAFMIAAWIGTTSLGIIFARYFKQTWVGSQSCGTDQWFAWH RLLMVTTWSLTVAAYVLIWVELKQAVWHAHSIIGLITVILCFIQPIGALF RPGPNDKKRPYFNWGHWLGGNLAHILGIVTIFFSVKLPKAELPEWMDWIL VSFVVVHVLVHLIFSIGGMASERHLSQRANTFQMGDMSHHQQHAMRNGMS MERKMDAPYAGMRKGLLGVYGVVLILFVTVLILLVVLAPIEQFLGKS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11285-PA | 646 | GF11285-PA | 1..646 | 1..647 | 2899 | 88.3 | Plus |
Dana\GF14493-PA | 159 | GF14493-PA | 6..158 | 14..179 | 159 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20560-PA | 647 | GG20560-PA | 1..647 | 1..647 | 3384 | 98 | Plus |
Dere\GG10152-PA | 159 | GG10152-PA | 6..158 | 14..179 | 150 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22061-PA | 646 | GH22061-PA | 27..646 | 29..645 | 2697 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8399-PA | 647 | CG8399-PA | 1..647 | 1..647 | 3391 | 100 | Plus |
CG8399-PB | 656 | CG8399-PB | 1..656 | 1..647 | 3371 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19146-PA | 655 | GI19146-PA | 15..654 | 8..644 | 2754 | 80.2 | Plus |
Dmoj\GI17382-PA | 159 | GI17382-PA | 6..158 | 14..179 | 149 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17209-PA | 655 | GL17209-PA | 14..655 | 10..647 | 2787 | 84.2 | Plus |
Dper\GL21051-PA | 159 | GL21051-PA | 6..158 | 14..179 | 151 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21047-PB | 656 | GA21047-PB | 14..656 | 10..647 | 2772 | 84.2 | Plus |
Dpse\GA21047-PA | 656 | GA21047-PA | 14..656 | 10..647 | 2772 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21652-PA | 467 | GM21652-PA | 140..467 | 320..647 | 1720 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11152-PA | 647 | GD11152-PA | 1..647 | 1..647 | 3397 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22279-PA | 637 | GJ22279-PA | 19..636 | 29..644 | 2751 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12452-PA | 329 | GK12452-PA | 23..319 | 28..320 | 974 | 62.3 | Plus |
Dwil\GK12451-PA | 215 | GK12451-PA | 2..189 | 404..591 | 773 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11746-PA | 648 | GE11746-PA | 1..648 | 1..647 | 3385 | 97.8 | Plus |
Translation from 118 to 2061
> LD47639.hyp MMQALTMRSWLATLVTALLAVAIWPDPGQSLPQGAPETVCDTMLPFHSGG SVLPQNSVSPFSVETSSSTLGQGQTLRVDLTGVPAGLSFGGYMIQARNRN PPHQIIGQFGPARDGTIKLMNCENSVNNSATHSNAGPKQQVILEWQSPVD FLGQVVFNATIAQSYNEFWVGVPSQPVQIVRRDLSAAPPLPTQSPSAPAG TTRAPYVPPSYVAPNNVVAVSSDPIYNGCGQSKNCFGFPDGCVATKSCTS ITVVTVRGDVFEFEIQSGKGTNAAYVAVGLSDDAKMGDDLTTECVPENGR VNLYSSLTSASPYSAVRSNVNQNSARLLDASIVDGVIYCRVQRDAVTNVQ GRTFDLRNGKYHLLVASGSSLKENSVGYHDIGRLPSAQPINLAEVQDLSG SSRLLIQLHGAFMIAAWIGTTSLGIIFARYFKQTWVGSQSCGTDQWFAWH RLLMVTTWSLTVAAYVLIWVELKQAVWHAHSIIGLITVILCFIQPIGALF RPGPNDKKRPYFNWGHWLGGNLAHILGIVTIFFSVKLPKAELPEWMDWIL VSFVVVHVLVHLIFSIGGMASERHLSQRANTFQMGDMSHHQQHAMRNGMS MERKMDAPYAGMRKGLLGVYGVVLILFVTVLILLVVLAPIEQFLGKS*