BDGP Sequence Production Resources |
Search the DGRC for LD47713
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 477 |
Well: | 13 |
Vector: | pOT2 |
Associated Gene/Transcript | Fic-RA |
Protein status: | LD47713.pep: gold |
Preliminary Size: | 2059 |
Sequenced Size: | 1929 |
Gene | Date | Evidence |
---|---|---|
CG9523 | 2001-01-01 | Release 2 assignment |
CG9523 | 2002-04-04 | Blastp of sequenced clone |
CG9523 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9523 | 2008-04-29 | Release 5.5 accounting |
CG9523 | 2008-08-15 | Release 5.9 accounting |
CG9523 | 2008-12-18 | 5.12 accounting |
1929 bp (1929 high quality bases) assembled on 2002-04-04
GenBank Submission: AY095059
> LD47713.complete AAGAAGCAAGTACGTGGTGCTAGAAGTCAGACCGCAACGACTGCAATATT GCAGATAAACAATAATTTTGGCCACACGTCTTCCAGCGTTTGGACTCAAC GTAACATGTACCTGGCGTGTCAAGTATTCAAAATTCGCGTGAAACACAAA GGAACCTAAAGCATTGGCCATGGGCACGGAAGCAGAACAACCGAGTCCAC CTGCTCAGCAGCAAGATCAAGAGAATCCGCCTCTCTGTAAGGCACAAAAT CCGAAGCCTGCCCGCCTCTATCGCTTTGTACTGATCTTCGTCGCTGGCAG CCTGGCGGCCTGGACGTTTCATGCCCTAAGCTCAACGAATCTGGTCTGGA AACTGCGGCAGCTCCATCATCTGCCGACCGCCCACTACTTGCAGACGCGT GACGAGTTCGCACTGTACTCCGTGGAGGAGCTAAATGCCTTCAAAGAATT CTACGACAAGAGCGTCAGCGACAGTGTCGGCGCCAGCTACACGGAGGCGG AGCAGACGAACATCAAGGAGGCGCTGGGGGCACTGCGAATGGCCCAGGAC TTGTACCTGGCGGGGAAGGATGACAAGGCGGCGCGTCTATTCGAACATGC TCTCGCTCTAGCGCCCCGACACCCGGAAGTCCTACTGCGCTACGGCGAGT TCCTTGAGCACAACCAGCGCAACATTGTGCTGGCGGATCAGTACTACTTT CAGGCTCTGACCATCAGCCCGAGCAACTCCGAGGCACTAGCCAACCGTCA GCGCACGGCAGACGTGGTGCAGAGTCTGGACGAACGCCGCCTGGAATCGC TGGACTCCAAACGAGACGCCCTCTCCGCCATTCACGAGTCCAACGGAGCC CTGCGACGGGCAAAGAAAGAAGCCTACTTCCAGCACATTTACCACTCAGT AGGCATTGAGGGCAACACCATGACGCTGGCACAGACGAGGTCTATCCTAG AGACCCGCATGGCCGTAGACGGCAAATCCATTGACGAGCACAACGAGATC TTGGGCATGGATCTGGCTATGAAGTACATAAACGCTAGTCTGGTGCAAAA AATCGATATCACTATTAAGGACATCCTCGAGCTGCATCGCAGAGTTCTGG GGCATGTGGACCCAATTGAAGGGGGCGAGTTCCGACGTAACCAGGTGTAT GTTGGAGGTCACATACCGCCAGGTCCCGGCGATCTCGCGCTGCTAATGCA GCGTTTCGAACGGTGGCTAAACTCGGAGCACAGTAGCACACTGCATCCTG TCAACTATGCAGCCCTTGCACACTACAAGTTGGTCCATATTCACCCATTC GTCGATGGAAATGGACGCACCTCACGTCTGCTGATGAACACGCTGTTGAT GCGAGCAGGCTACCCACCAGTGATAATTCCAAAGCAACAGCGTAGCAAGT ACTATCATTTCCTCAAGTTAGCCAACGAGGGCGATATTCGCCCCTTTGTG CGGTTCATCGCTGACTGCACGGAGAAGACGCTAGACCTTTATCTGTGGGC CACAAGCGATCTGCCGCAACAGATCCCTATGCTCATCCAGACGGAAAGCG AGGCCGGTGAGCGTCTGGCGCAAATGCAGTCTCCCAACGTGGCACAAAGG TCATCAATATTAGAATTCTACGAATCCGGATCTGGAGATCTACCGTGACC CATCTAGATGCATTGATATTAGACAATTCGTTAATTTATTATTTATATGT TTGTGCTATATTCTGTAAATTATTGTAAACTTCGAATTACCTACATCAGT AGATGGCTTTAGTGAAGAAAAATAACGATGTAATTCTGTGATCATATTTA AGCTAAAAGACAACCAAAAAATGTACATAATGCACAATCCAACTAACGTG TCCTAATATTTAGTACGATTTTTATAGAATTACATATCCTTTAAAACCCA AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 6423330..6424379 | 1..1050 | 5175 | 99.5 | Plus |
chr2L | 23010047 | chr2L | 6424698..6425344 | 1251..1897 | 3145 | 99.1 | Plus |
chr2L | 23010047 | chr2L | 6424439..6424642 | 1051..1254 | 1020 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6424357..6425406 | 1..1050 | 5250 | 100 | Plus |
2L | 23513712 | 2L | 6425725..6426371 | 1251..1897 | 3205 | 99.7 | Plus |
2L | 23513712 | 2L | 6425466..6425669 | 1051..1254 | 1020 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6424357..6425406 | 1..1050 | 5250 | 100 | Plus |
2L | 23513712 | 2L | 6425725..6426371 | 1251..1897 | 3205 | 99.6 | Plus |
2L | 23513712 | 2L | 6425466..6425669 | 1051..1254 | 1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6423330..6424379 | 1..1050 | 99 | -> | Plus |
chr2L | 6424439..6424642 | 1051..1254 | 100 | -> | Plus |
chr2L | 6424702..6425346 | 1255..1899 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9523-RA | 1..1479 | 170..1648 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9523-RA | 1..1479 | 170..1648 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fic-RA | 1..1479 | 170..1648 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9523-RA | 1..1479 | 170..1648 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fic-RA | 1..1479 | 170..1648 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9523-RA | 21..1919 | 1..1899 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9523-RA | 21..1919 | 1..1899 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fic-RA | 22..1918 | 1..1897 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9523-RA | 21..1919 | 1..1899 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Fic-RA | 22..1918 | 1..1897 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6424357..6425406 | 1..1050 | 100 | -> | Plus |
2L | 6425466..6425669 | 1051..1254 | 100 | -> | Plus |
2L | 6425729..6426373 | 1255..1899 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6424357..6425406 | 1..1050 | 100 | -> | Plus |
2L | 6425466..6425669 | 1051..1254 | 100 | -> | Plus |
2L | 6425729..6426373 | 1255..1899 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6424357..6425406 | 1..1050 | 100 | -> | Plus |
2L | 6425466..6425669 | 1051..1254 | 100 | -> | Plus |
2L | 6425729..6426373 | 1255..1899 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6425466..6425669 | 1051..1254 | 100 | -> | Plus |
arm_2L | 6424357..6425406 | 1..1050 | 100 | -> | Plus |
arm_2L | 6425729..6426373 | 1255..1899 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6424357..6425406 | 1..1050 | 100 | -> | Plus |
2L | 6425466..6425669 | 1051..1254 | 100 | -> | Plus |
2L | 6425729..6426373 | 1255..1899 | 99 | Plus |
Translation from 169 to 1647
> LD47713.pep MGTEAEQPSPPAQQQDQENPPLCKAQNPKPARLYRFVLIFVAGSLAAWTF HALSSTNLVWKLRQLHHLPTAHYLQTRDEFALYSVEELNAFKEFYDKSVS DSVGASYTEAEQTNIKEALGALRMAQDLYLAGKDDKAARLFEHALALAPR HPEVLLRYGEFLEHNQRNIVLADQYYFQALTISPSNSEALANRQRTADVV QSLDERRLESLDSKRDALSAIHESNGALRRAKKEAYFQHIYHSVGIEGNT MTLAQTRSILETRMAVDGKSIDEHNEILGMDLAMKYINASLVQKIDITIK DILELHRRVLGHVDPIEGGEFRRNQVYVGGHIPPGPGDLALLMQRFERWL NSEHSSTLHPVNYAALAHYKLVHIHPFVDGNGRTSRLLMNTLLMRAGYPP VIIPKQQRSKYYHFLKLANEGDIRPFVRFIADCTEKTLDLYLWATSDLPQ QIPMLIQTESEAGERLAQMQSPNVAQRSSILEFYESGSGDLP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14521-PA | 497 | GF14521-PA | 16..497 | 6..492 | 2198 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10411-PA | 495 | GG10411-PA | 22..495 | 19..492 | 2415 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10751-PA | 483 | GH10751-PA | 8..474 | 26..489 | 2141 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fic-PA | 492 | CG9523-PA | 1..492 | 1..492 | 2542 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11595-PA | 502 | GI11595-PA | 36..474 | 34..471 | 2100 | 88.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25530-PA | 508 | GL25530-PA | 40..508 | 25..492 | 2243 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21854-PA | 508 | GA21854-PA | 40..508 | 25..492 | 2243 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18629-PA | 492 | GM18629-PA | 1..492 | 1..492 | 2608 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23409-PA | 492 | GD23409-PA | 1..492 | 1..492 | 2595 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12914-PA | 485 | GJ12914-PA | 21..470 | 34..485 | 2152 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14760-PA | 498 | GK14760-PA | 42..498 | 35..492 | 2181 | 88.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13868-PA | 495 | GE13868-PA | 22..495 | 19..492 | 2421 | 94.5 | Plus |
Translation from 169 to 1647
> LD47713.hyp MGTEAEQPSPPAQQQDQENPPLCKAQNPKPARLYRFVLIFVAGSLAAWTF HALSSTNLVWKLRQLHHLPTAHYLQTRDEFALYSVEELNAFKEFYDKSVS DSVGASYTEAEQTNIKEALGALRMAQDLYLAGKDDKAARLFEHALALAPR HPEVLLRYGEFLEHNQRNIVLADQYYFQALTISPSNSEALANRQRTADVV QSLDERRLESLDSKRDALSAIHESNGALRRAKKEAYFQHIYHSVGIEGNT MTLAQTRSILETRMAVDGKSIDEHNEILGMDLAMKYINASLVQKIDITIK DILELHRRVLGHVDPIEGGEFRRNQVYVGGHIPPGPGDLALLMQRFERWL NSEHSSTLHPVNYAALAHYKLVHIHPFVDGNGRTSRLLMNTLLMRAGYPP VIIPKQQRSKYYHFLKLANEGDIRPFVRFIADCTEKTLDLYLWATSDLPQ QIPMLIQTESEAGERLAQMQSPNVAQRSSILEFYESGSGDLP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Fic-PA | 492 | CG9523-PA | 1..492 | 1..492 | 2542 | 100 | Plus |