BDGP Sequence Production Resources |
Search the DGRC for LD47749
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 477 |
Well: | 49 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9799-RA |
Protein status: | LD47749.pep: gold |
Sequenced Size: | 2948 |
Gene | Date | Evidence |
---|---|---|
CG9799 | 2004-10-02 | Blastp of sequenced clone |
CG9799 | 2008-04-29 | Release 5.5 accounting |
CG9799 | 2008-08-15 | Release 5.9 accounting |
CG9799 | 2008-12-18 | 5.12 accounting |
2948 bp assembled on 2006-11-09
GenBank Submission: BT016079
> LD47749.complete GCAGTAAACATTTTCGGCATGTTGCGGAAATCGTTTATATTAGCTTAAAA AATCGATAAAAAGACAGAAAGAGACATTTCGGACAGTAAAATGACGCATC TGCGGTCGGAGGATAAGCCACAGTCGGAGGAGCGGAAGTCTGTGTTCAAG GAGAGCAGCTGCATCTTCCGGCGGAATCGAGCCCTCGGCTATGTGAGCAA CCAGGTTCCAGCAGTCACCCGCTACGTGCAGCGTCGTCGGGACACTTTGC TGATCACCTGCATCGGCAGATCTTTTCAGGTGTACACCGCCAACCACTTT CGCCTGCTGCACGTTAGCGGATTGCATCCGGACGAGATTACGGCTCTGGC CACGGATCGACTGCACACGTACACGGCGAGCAACAAGTGTATCTACGCCT GGCGGGCGGGCAAACACATCCGGCACGTGTACCGTGGCCACCAGAAAGAT GTCCACCTCCTGCTGCCTTTTGGTTCCAGTTTGATAGCCATCGATAGGCA GAATGTGTTAAAAGTGTGGAATATTTCAACCGAGGATGTCTATTTGGAAG TGCCCTTCCGGTCTGAGGAGTTCCAGATCACAGCTGTGACCCATCCGCCC ACGTACATCAATAAAATAGTACTAGGCTCCCAGCAGGGCCAACTAAAGAT CTTGAACATAAAGAAGAACAGTGTGGTGTGCACTTTGAGTCACCACGACA GCAGGATCACCTGCATTGAACCGTCCCCTGCTTTGGATGTCGTGGCCGTG GGACACGGGGATGGCACTATTATCTTGCTTAACCTTAAGTTCGACGAGGT GCTTATGAGCTTCCAGCAGGATTGGGGTCAGGTCACCAACCTTTCCTTCC GTACCGACGGCCCACCAATCCTTGTGTCCGCCTGCAGCAATGGTTACATG GCCTTCTGGAACCTGGAGGAGCGCAAGTTAGCCGGTCAGCTGCAAGCGCA CGAGGAGTCGGTGACCACGGCCATTTGTCTGCCCAGCGAGCCCGTGGTCT TCACCACTTCACCAGACAATTCAATGAGGATGTTTGTTTTCGATATGCCA GATGGTGGTGCCAGACAGCTGAGGATCCGCGAGGGACACACAAAGCCGCC GTTTTGTATTCGCTACCACGGCAGCTCGGGCGTATCCATTCTCTCTTCGG GCGAGGACAGCACCATGAGAGTCTTCTCCACCATTTCCGAATCGCTGAAC AAGAGCATGGGCAGGGCTACCTACAATCCAAAAGCCACAAAGAAGAAGAA TCGCTTTGAGCACGATAAGTTTGGAATGCCACCCATACTGGAGTTCACAT CGGATACGGCTCGCGAAAAGGAGTGGGATAACATCGCTGCCATCCATGCG GGCGTTATTCAGACGACAACCTGGTCGTTTGGCAAGAACCGTATGGGCGA GCACCGCCTGGTTCCGAAACAGTTCCAAAACAGCAACCGCACCAACTTCC AGAACGAGACCACATGCATTGTGCTGACGCACTGTGGCAACTTTGTGATC ATTGGCTATAGCAGTGGCGACATTGAGCGCTTTAATATCCAGTCTGGACT CCATCGGGCTACCTATGGCTCTCCAGCCCACAAGATGGCAGTACGCGGCT TGGCCAGCGACAATCTTAACCAAACCGTCATCTCTGGCTGTTCGGAAGGC TTGCTCAAGTTCTGGTCATTCAAAGGAAAGGTTGACAAGCCCTTAGCGAC TCTACGCCTGGCAGATGGAATCGCCCTGATTCGACAGCACCGAGAGAGCT CCATGCTGGCCATTGGTCTGGAAACATTCAAGATTTTTGTCGTAGACATG CACACGAGGGTCATTGTTCGCAAGTTCGTCGGTCACACAGCCAAGCTGAA TGACCTCACTTTCAGTCCGGATAGCCGCTGGCTGATCACCGCCGCCATGG ACTCCACGATCAAGGTGTGGGACATACCTTCCTCCTACATGGTGGATCAC TTCCGCGTCGAGGCGCCTTGCGTATCGTTAAGTATGTCGCCTAATGGCGA CTTTCTGGCCACCGCACATGTTGGACTTTTGGGCATTTACCTGTGGGCCA ACAAGACGCTGTTTAATCAGATTTCCCTGCGCTCCATCGATCCTTTGGAG CCGGCTCCGTACGTGGGATTGCCCACGAATGTGTGCGATGCCATGGAACT GGAAGATGGCATGAAGGAGCTAGAGATCGACGAAGAGGACGAGTCAAAAC TCGGCGAGCTAGTTGACACCAAGTACGAAACTCCAACGCAGCTGTCCGAG GAACTGATAACGCTATCCGGGTTGGCTGCATCCCGTTGGCAGAATCTATT GGATTTGGAGCTAATCAAGCAACGTAACAAGCCCAAGGCACCACCAAAAG CTCCCAAACAGGCCCCATTCTTCCTGCCCACGGTTTCGGGACTGGAACTG CGCTTCGATGTGGAGAACGGTCAGAAGGAGGAGGATGAATCCCGGATTCG GAAGGCTTCTACTCTCAACAATCTTACTGCCTTTGGCCAGCTGCTGGAGG AAACTGCTGACTCCCTGGACTTCGCATCGGCTGTGGCGCACTTGACCCAA CTAGGACCATCGATGGTTGACTTTGAGATCAAATCTCTGCACCCGGAGGC TGGAGGAACACTCCTTGCCATGCTGCAGTTCCTCAAACTCGTTAAGTTCA TGTTTGGAACCAATCTGAACTTTGAGCTGGCTCAATCGTATCTAAGCGTC TTCTTGCGATCCCACGGTCTCGGGTTGACGGAGTTCCCGGATTTGGTAAA GGAGCTGCGCACTGTGTCCCAGGTGCAGCAGGAGGCTTGGCAGCGTGTGG AGGAGAAGCTCATCTATGGAACTGGAGTTGTGGCCGCTCTCCGAAACTTT GCGCACTAGTTTCCACCAGATTATGTTGTAGTTCATTTTGAAATTTTGTA AATAAATTTACAAAACATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9799-RA | 3025 | CG9799-RA | 95..3016 | 1..2922 | 14610 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 9212636..9213881 | 1249..4 | 6200 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 9210841..9212081 | 2921..1681 | 6100 | 99.4 | Minus |
chr3R | 27901430 | chr3R | 9212141..9212572 | 1681..1250 | 2130 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 13387443..13388691 | 1249..1 | 6245 | 100 | Minus |
3R | 32079331 | 3R | 13385647..13386888 | 2922..1681 | 6210 | 100 | Minus |
3R | 32079331 | 3R | 13386948..13387379 | 1681..1250 | 2160 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 13128274..13129522 | 1249..1 | 6245 | 100 | Minus |
3R | 31820162 | 3R | 13126478..13127719 | 2922..1681 | 6210 | 100 | Minus |
3R | 31820162 | 3R | 13127779..13128210 | 1681..1250 | 2160 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 9210841..9212080 | 1682..2921 | 99 | <- | Minus |
chr3R | 9212141..9212572 | 1250..1681 | 99 | <- | Minus |
chr3R | 9212636..9213884 | 1..1249 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9799-RA | 1..2769 | 91..2859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9799-RA | 1..2769 | 91..2859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9799-RA | 1..2769 | 91..2859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9799-RA | 1..2769 | 91..2859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9799-RA | 1..2769 | 91..2859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9799-RA | 17..2937 | 1..2921 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9799-RA | 24..2944 | 1..2921 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9799-RA | 19..2939 | 1..2921 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9799-RA | 17..2937 | 1..2921 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9799-RA | 19..2939 | 1..2921 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13385648..13386887 | 1682..2921 | 100 | <- | Minus |
3R | 13386948..13387379 | 1250..1681 | 100 | <- | Minus |
3R | 13387443..13388691 | 1..1249 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13385648..13386887 | 1682..2921 | 100 | <- | Minus |
3R | 13386948..13387379 | 1250..1681 | 100 | <- | Minus |
3R | 13387443..13388691 | 1..1249 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13385648..13386887 | 1682..2921 | 100 | <- | Minus |
3R | 13386948..13387379 | 1250..1681 | 100 | <- | Minus |
3R | 13387443..13388691 | 1..1249 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 9211370..9212609 | 1682..2921 | 100 | <- | Minus |
arm_3R | 9212670..9213101 | 1250..1681 | 100 | <- | Minus |
arm_3R | 9213165..9214413 | 1..1249 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13126479..13127718 | 1682..2921 | 100 | <- | Minus |
3R | 13127779..13128210 | 1250..1681 | 100 | <- | Minus |
3R | 13128274..13129522 | 1..1249 | 100 | Minus |
Translation from 90 to 2858
> LD47749.pep MTHLRSEDKPQSEERKSVFKESSCIFRRNRALGYVSNQVPAVTRYVQRRR DTLLITCIGRSFQVYTANHFRLLHVSGLHPDEITALATDRLHTYTASNKC IYAWRAGKHIRHVYRGHQKDVHLLLPFGSSLIAIDRQNVLKVWNISTEDV YLEVPFRSEEFQITAVTHPPTYINKIVLGSQQGQLKILNIKKNSVVCTLS HHDSRITCIEPSPALDVVAVGHGDGTIILLNLKFDEVLMSFQQDWGQVTN LSFRTDGPPILVSACSNGYMAFWNLEERKLAGQLQAHEESVTTAICLPSE PVVFTTSPDNSMRMFVFDMPDGGARQLRIREGHTKPPFCIRYHGSSGVSI LSSGEDSTMRVFSTISESLNKSMGRATYNPKATKKKNRFEHDKFGMPPIL EFTSDTAREKEWDNIAAIHAGVIQTTTWSFGKNRMGEHRLVPKQFQNSNR TNFQNETTCIVLTHCGNFVIIGYSSGDIERFNIQSGLHRATYGSPAHKMA VRGLASDNLNQTVISGCSEGLLKFWSFKGKVDKPLATLRLADGIALIRQH RESSMLAIGLETFKIFVVDMHTRVIVRKFVGHTAKLNDLTFSPDSRWLIT AAMDSTIKVWDIPSSYMVDHFRVEAPCVSLSMSPNGDFLATAHVGLLGIY LWANKTLFNQISLRSIDPLEPAPYVGLPTNVCDAMELEDGMKELEIDEED ESKLGELVDTKYETPTQLSEELITLSGLAASRWQNLLDLELIKQRNKPKA PPKAPKQAPFFLPTVSGLELRFDVENGQKEEDESRIRKASTLNNLTAFGQ LLEETADSLDFASAVAHLTQLGPSMVDFEIKSLHPEAGGTLLAMLQFLKL VKFMFGTNLNFELAQSYLSVFLRSHGLGLTEFPDLVKELRTVSQVQQEAW QRVEEKLIYGTGVVAALRNFAH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17386-PA | 918 | GF17386-PA | 1..918 | 1..922 | 4294 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17057-PA | 921 | GG17057-PA | 1..921 | 1..922 | 4819 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18547-PA | 930 | GH18547-PA | 1..929 | 1..921 | 4132 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9799-PA | 922 | CG9799-PA | 1..922 | 1..922 | 4791 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23246-PA | 928 | GI23246-PA | 1..927 | 1..921 | 3870 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23066-PA | 916 | GL23066-PA | 2..916 | 6..922 | 4289 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22044-PA | 916 | GA22044-PA | 2..916 | 6..922 | 4282 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25942-PA | 922 | GM25942-PA | 1..922 | 1..922 | 4852 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20503-PA | 922 | GD20503-PA | 1..922 | 1..922 | 4859 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10743-PA | 927 | GJ10743-PA | 1..927 | 1..922 | 4132 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13349-PA | 922 | GK13349-PA | 1..921 | 1..921 | 4059 | 80.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24446-PA | 921 | GE24446-PA | 1..921 | 1..922 | 4825 | 96.4 | Plus |
Translation from 90 to 2858
> LD47749.hyp MTHLRSEDKPQSEERKSVFKESSCIFRRNRALGYVSNQVPAVTRYVQRRR DTLLITCIGRSFQVYTANHFRLLHVSGLHPDEITALATDRLHTYTASNKC IYAWRAGKHIRHVYRGHQKDVHLLLPFGSSLIAIDRQNVLKVWNISTEDV YLEVPFRSEEFQITAVTHPPTYINKIVLGSQQGQLKILNIKKNSVVCTLS HHDSRITCIEPSPALDVVAVGHGDGTIILLNLKFDEVLMSFQQDWGQVTN LSFRTDGPPILVSACSNGYMAFWNLEERKLAGQLQAHEESVTTAICLPSE PVVFTTSPDNSMRMFVFDMPDGGARQLRIREGHTKPPFCIRYHGSSGVSI LSSGEDSTMRVFSTISESLNKSMGRATYNPKATKKKNRFEHDKFGMPPIL EFTSDTAREKEWDNIAAIHAGVIQTTTWSFGKNRMGEHRLVPKQFQNSNR TNFQNETTCIVLTHCGNFVIIGYSSGDIERFNIQSGLHRATYGSPAHKMA VRGLASDNLNQTVISGCSEGLLKFWSFKGKVDKPLATLRLADGIALIRQH RESSMLAIGLETFKIFVVDMHTRVIVRKFVGHTAKLNDLTFSPDSRWLIT AAMDSTIKVWDIPSSYMVDHFRVEAPCVSLSMSPNGDFLATAHVGLLGIY LWANKTLFNQISLRSIDPLEPAPYVGLPTNVCDAMELEDGMKELEIDEED ESKLGELVDTKYETPTQLSEELITLSGLAASRWQNLLDLELIKQRNKPKA PPKAPKQAPFFLPTVSGLELRFDVENGQKEEDESRIRKASTLNNLTAFGQ LLEETADSLDFASAVAHLTQLGPSMVDFEIKSLHPEAGGTLLAMLQFLKL VKFMFGTNLNFELAQSYLSVFLRSHGLGLTEFPDLVKELRTVSQVQQEAW QRVEEKLIYGTGVVAALRNFAH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9799-PA | 922 | CG9799-PA | 1..922 | 1..922 | 4791 | 100 | Plus |