BDGP Sequence Production Resources |
Search the DGRC for LD47783
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 477 |
Well: | 83 |
Vector: | pOT2 |
Associated Gene/Transcript | I-2-RA |
Protein status: | LD47783.pep: gold |
Sequenced Size: | 1542 |
Gene | Date | Evidence |
---|---|---|
CG10574 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10574 | 2004-04-27 | Blastp of sequenced clone |
I-2 | 2008-04-29 | Release 5.5 accounting |
I-2 | 2008-08-15 | Release 5.9 accounting |
I-2 | 2008-12-18 | 5.12 accounting |
1542 bp (1542 high quality bases) assembled on 2004-04-27
GenBank Submission: BT014655
> LD47783.complete ATTTTACCGGATTTGCCATTTGCTTTGCAATACAAATTAGAAGAGAATAT CCACACAGTGACCATTAAAGCGTAAAGAGCCAAATCTAACGTTTTCCAAA TTAAGATCAAAACCGCCCGTCTGGCGACATCGATGAGATCGTGGCCCTCG CCCAAAACCCAGCTGGCTGCCAACTTGAAGATTGTGGCGTAAATTGCCCT CCGGAAACGCAGTTGCAATTGCAGTTAACAGGCGAAAGTCACACAAGTAA CACAGATAGCCAGGATGCAGAACAATCCCAGCCCACAGCTACCCTGCAAG GGTATACTAAAGACTTCGCGTAGCTTCGACAAGTCGGGAGCCAGTTTTCG CAAAAGTGCCAAGTTCGATGAGCTGAACGTGATGCAGACCTTCCATCCGG CCGACAAGGACTACGGACACATGAAAATCGATGAGCCCAAAACGCCGTAC AACTACACGGAGGGCTTCGACGAGAACAGGGACGAGCTGGACACGGAGTT GCTAGTGGAGAAACTCCGCATAGCGGCTAACACACAGCCGTCGACAGAGA GCATCGAGGACGATGGTTCCTCCGGTGATGACCAGCCCCTTAGCGAAGAG GAGCGACAACGGCGGCGCGAATTCGAGCGACGCCGTAAGGCCCACTATCG CGAGTTTGAGGCCGTCAAACTGGCACGAAAACTGATCCAGGAGGAGGACG ACGACGATGACGACGAGGACAAGGGTGCGGATAGCCGGCCCTCGGGCTCG TCACAGGGCGCTTCCAGCTCCGGACGTTTCGCGAGCAGTTCGACCAAACG GTCGAGCTCTCAGGCTGACTCCACCACATCCCCGTCTACCAGCGCCGGCC AGAACATGGACCTGGAGCCATCGAATAACTAGAAGCAATGTCAACCCATC AATCAATCACTAATGTTTACCTAGCGGACAATGGACGATTCTGAGGGCAG CTCATCCAAAACAATAAACAAACGAAATTATATCAAATTATCAAGTGCTG TGCGAGTGCGGAGTGAGAAGTGGATGCTGATTAGCAGGGTGGCGAGGAGC ACTCGTGATTAATTGAATTTACCCAACTAAACACAAAAAACAAACCGTCG CCAAGGAGATGCGTCATCGAGTAGTGAACACAGCCGATAAGCCGAGGGGC ACTTTATTGTTGCAAATTGAGTTTAGAGCACAAAGAATGTGCACCTGGTC GGAGAATTTGATTGTACGACACAAAATATAATTAATCGTATGCGTCTCAG CCGTAGCGTCCTGTATTGTTGCAAATGTAGTTAAACAAAAGTCTTTCAAA TTGATATCGAGATGGAAAGCCAACCCGTTCGCAGCTCCGTTTGCATTTAA TTTGATTGGATGCCCAGTGCCACAGAATGGATAACTTGTTGTAACTAGCG TTGAAATTGATTTGGCCTTACTTTTAGTTATTTATTAATACGATACTATT ATGATTACTATTAAGTTTTAGCCATCGAATGCGAGCCGAGCGTTTCAATA AAGAGAGTCCAAAAACCCAATTGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 9826169..9827084 | 1523..608 | 4580 | 100 | Minus |
chr3L | 24539361 | chr3L | 9828321..9828570 | 250..1 | 1220 | 99.2 | Minus |
chr3L | 24539361 | chr3L | 9827616..9827785 | 512..343 | 835 | 99.4 | Minus |
chr3L | 24539361 | chr3L | 9827852..9827953 | 344..243 | 495 | 99 | Minus |
chr3L | 24539361 | chr3L | 9827141..9827235 | 607..513 | 475 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 9834360..9835282 | 1530..608 | 4615 | 100 | Minus |
3L | 28110227 | 3L | 9836518..9836767 | 250..1 | 1250 | 100 | Minus |
3L | 28110227 | 3L | 9835813..9835982 | 512..343 | 850 | 100 | Minus |
3L | 28110227 | 3L | 9836049..9836150 | 344..243 | 495 | 99 | Minus |
3L | 28110227 | 3L | 9835339..9835433 | 607..513 | 475 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 9827460..9828382 | 1530..608 | 4615 | 100 | Minus |
3L | 28103327 | 3L | 9829618..9829867 | 250..1 | 1250 | 100 | Minus |
3L | 28103327 | 3L | 9828913..9829082 | 512..343 | 850 | 100 | Minus |
3L | 28103327 | 3L | 9829149..9829250 | 344..243 | 495 | 99 | Minus |
3L | 28103327 | 3L | 9828439..9828533 | 607..513 | 475 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 565..601 | 686..721 | 119 | 83.8 | Plus |
Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 852..917 | 29..95 | 116 | 65.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9828325..9828570 | 1..246 | 99 | Minus | |
chr3L | 9827141..9827235 | 513..607 | 100 | <- | Minus |
chr3L | 9827616..9827783 | 345..512 | 99 | <- | Minus |
chr3L | 9827852..9827949 | 247..344 | 100 | <- | Minus |
chr3L | 9826169..9827084 | 608..1523 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
I-2-RB | 298..933 | 247..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
I-2-RB | 298..933 | 247..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
I-2-RB | 298..933 | 247..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
I-2-RB | 298..933 | 247..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
I-2-RB | 298..933 | 247..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
I-2-RA | 30..1552 | 1..1523 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
I-2-RA | 30..1552 | 1..1523 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
I-2-RA | 39..1561 | 1..1523 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
I-2-RA | 30..1552 | 1..1523 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
I-2-RA | 39..1561 | 1..1523 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9834367..9835282 | 608..1523 | 100 | <- | Minus |
3L | 9835339..9835433 | 513..607 | 100 | <- | Minus |
3L | 9835813..9835980 | 345..512 | 100 | <- | Minus |
3L | 9836049..9836146 | 247..344 | 100 | <- | Minus |
3L | 9836522..9836767 | 1..246 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9834367..9835282 | 608..1523 | 100 | <- | Minus |
3L | 9835339..9835433 | 513..607 | 100 | <- | Minus |
3L | 9835813..9835980 | 345..512 | 100 | <- | Minus |
3L | 9836049..9836146 | 247..344 | 100 | <- | Minus |
3L | 9836522..9836767 | 1..246 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9834367..9835282 | 608..1523 | 100 | <- | Minus |
3L | 9835339..9835433 | 513..607 | 100 | <- | Minus |
3L | 9835813..9835980 | 345..512 | 100 | <- | Minus |
3L | 9836049..9836146 | 247..344 | 100 | <- | Minus |
3L | 9836522..9836767 | 1..246 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9828913..9829080 | 345..512 | 100 | <- | Minus |
arm_3L | 9829149..9829246 | 247..344 | 100 | <- | Minus |
arm_3L | 9827467..9828382 | 608..1523 | 100 | <- | Minus |
arm_3L | 9828439..9828533 | 513..607 | 100 | <- | Minus |
arm_3L | 9829622..9829867 | 1..246 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9827467..9828382 | 608..1523 | 100 | <- | Minus |
3L | 9828439..9828533 | 513..607 | 100 | <- | Minus |
3L | 9828913..9829080 | 345..512 | 100 | <- | Minus |
3L | 9829149..9829246 | 247..344 | 100 | <- | Minus |
3L | 9829622..9829867 | 1..246 | 100 | Minus |
Translation from 264 to 881
> LD47783.pep MQNNPSPQLPCKGILKTSRSFDKSGASFRKSAKFDELNVMQTFHPADKDY GHMKIDEPKTPYNYTEGFDENRDELDTELLVEKLRIAANTQPSTESIEDD GSSGDDQPLSEEERQRRREFERRRKAHYREFEAVKLARKLIQEEDDDDDD EDKGADSRPSGSSQGASSSGRFASSSTKRSSSQADSTTSPSTSAGQNMDL EPSNN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25124-PA | 210 | GF25124-PA | 1..210 | 1..205 | 760 | 84.8 | Plus |
Dana\GF15110-PA | 288 | GF15110-PA | 8..141 | 11..144 | 343 | 51.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14003-PA | 205 | GG14003-PA | 1..205 | 1..205 | 1046 | 97.1 | Plus |
Dere\GG21754-PA | 293 | GG21754-PA | 6..136 | 11..144 | 324 | 51.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16012-PA | 207 | GH16012-PA | 1..207 | 1..205 | 654 | 73.9 | Plus |
Dgri\GH10084-PA | 240 | GH10084-PA | 1..138 | 1..146 | 256 | 50.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
I-2-PA | 205 | CG10574-PA | 1..205 | 1..205 | 1057 | 100 | Plus |
I-2-PB | 310 | CG10574-PB | 106..310 | 1..205 | 1057 | 100 | Plus |
CG6380-PB | 293 | CG6380-PB | 7..136 | 12..144 | 315 | 51.5 | Plus |
CG6380-PA | 293 | CG6380-PA | 7..136 | 12..144 | 315 | 51.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12278-PA | 202 | GI12278-PA | 1..202 | 1..205 | 645 | 73.7 | Plus |
Dmoj\GI14265-PA | 249 | GI14265-PA | 7..141 | 11..147 | 303 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16322-PA | 199 | GL16322-PA | 1..199 | 1..205 | 614 | 79.8 | Plus |
Dper\GL19746-PA | 262 | GL19746-PA | 6..147 | 11..150 | 291 | 51 | Plus |
Dper\GL22570-PA | 281 | GL22570-PA | 7..155 | 12..160 | 290 | 46.7 | Plus |
Dper\GL22569-PA | 281 | GL22569-PA | 7..155 | 12..160 | 290 | 46.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10405-PA | 199 | GA10405-PA | 1..199 | 1..205 | 614 | 79.8 | Plus |
Dpse\GA24711-PA | 281 | GA24711-PA | 7..155 | 12..160 | 290 | 46.7 | Plus |
Dpse\GA24707-PA | 281 | GA24707-PA | 7..155 | 12..160 | 290 | 46.7 | Plus |
Dpse\GA19552-PA | 262 | GA19552-PA | 6..147 | 11..150 | 287 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24837-PA | 310 | GM24837-PA | 106..310 | 1..205 | 1065 | 98.5 | Plus |
Dsec\GM17136-PA | 292 | GM17136-PA | 7..136 | 12..144 | 317 | 50.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21878-PA | 293 | GD21878-PA | 7..136 | 12..144 | 318 | 50.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13214-PA | 205 | GJ13214-PA | 1..142 | 1..142 | 633 | 93 | Plus |
Dvir\GJ16238-PA | 260 | GJ16238-PA | 7..141 | 11..147 | 297 | 46.4 | Plus |
Translation from 264 to 881
> LD47783.hyp MQNNPSPQLPCKGILKTSRSFDKSGASFRKSAKFDELNVMQTFHPADKDY GHMKIDEPKTPYNYTEGFDENRDELDTELLVEKLRIAANTQPSTESIEDD GSSGDDQPLSEEERQRRREFERRRKAHYREFEAVKLARKLIQEEDDDDDD EDKGADSRPSGSSQGASSSGRFASSSTKRSSSQADSTTSPSTSAGQNMDL EPSNN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
I-2-PA | 205 | CG10574-PA | 1..205 | 1..205 | 1057 | 100 | Plus |
I-2-PB | 310 | CG10574-PB | 106..310 | 1..205 | 1057 | 100 | Plus |
CG6380-PB | 293 | CG6380-PB | 7..136 | 12..144 | 315 | 51.5 | Plus |
CG6380-PA | 293 | CG6380-PA | 7..136 | 12..144 | 315 | 51.5 | Plus |