BDGP Sequence Production Resources |
Search the DGRC for LD47792
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 477 |
Well: | 92 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9769-RA |
Protein status: | LD47792.pep: gold |
Preliminary Size: | 1058 |
Sequenced Size: | 1342 |
Gene | Date | Evidence |
---|---|---|
CG9769 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9769 | 2002-05-18 | Blastp of sequenced clone |
CG9769 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9769 | 2008-04-29 | Release 5.5 accounting |
CG9769 | 2008-08-15 | Release 5.9 accounting |
CG9769 | 2008-12-18 | 5.12 accounting |
1342 bp (1342 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118972
> LD47792.complete CCGCACTATCGATAGGCCCTTTTCTTGCATCCCTAAAACATACGCGCAGC GTGGCTGAATAGAAATTATTGCGGAAATTTTCCTTGCAAATCTTGGCCAC CGAAAATTACCATGTCGGCTCTCAATCTGACCGTGCGCGTGCACCCGGTG GTGCTTTTCCAGGTGGTGGACGCCTTCGAGCGGCGGAACGCGGACTCGCA CCGCGTCATCGGCACCCTGCTCGGCTCTGTGGACAAAGGTGTGGTGGAGG TTACCAACTGTTTCTGTGTGCCGCACAAGGAGCACGATGACCAGGTGGAG GCAGAGCTGAGCTACGCCCTGGACATGTACGACCTCAACCGCAAGGTGAA CTCCAACGAGAGCGTGGTAGGCTGGTGGGCCACCGGCAACGACGTTACCA ACCACAGCTCGGTGATCCACGAGTATTACGCCCGCGAATGCAACAACCCG GTTCACCTCACCGTGGACACTTCGCTGCAGGGCGGACGTATGGGTCTGCG TGCTTATGTCTGCATTCAACTAGGAGTTCCCGGCGGCAAGAGCGGCTGCA TGTTCACGCCCATTCCTGTCGAGCTGACCAGCTACGAGCCGGAGACATTT GGGCTCAAGCTGCTTCAGAAGACCGTAGGCGTTTCGCCCGCTCACCGTCC CAAGACCGTTCCGCCAATGCTGGACCTGGCCCAAATCTCGGAGGCCTCCA CGAAGCTGCAGTCCCTGCTGGATCTTATTCTCAAGTACGTTGACGACGTG ATCGCTCACAAGGTAACCCCCGACAACGCCGTCGGACGCCAGCTGCTAGA CCTTATCCACTCCGTGCCGCACATGACCCACGAGCAGTTCACTCAGATGT TCAACGCCAACGTACGCAACCTTCTGCTGGTCATCACGCTCTCCCAGCTC ATCAAAACCCAGCTGCAGCTTAACGAAAAGCTCACCTTCCTGCCCACCGC CTAGAACGACGGCGTTTGTTGAAGTGGTAATATCTACTAAGGGTGGCATT GTAAACTGATTGTGTTTTTTATCAATGGGGGTCTACGTAATAAAGTGCTC TGATCGCCAAAAAAAAAAAACCAAAACTTGTATCGATTACTCTGGTCAGA ATGACATTCCATACTAAAGAAAATATATATGGGATTATCTTTTTTATAAC TCAATTGAAGAATCAGCATGAATCCTGTGACACCTACACTAAACGACCAT GTGGCGTTTGTAGGAGCATTCGAATCTACTGAAGACTCTTAAACACAACA GTATTCATCACCAGGAACAAAATAAATGCATGTGCAACTGAAAATTTAGC ACCCAACTGCTAAAACAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9769-RA | 1310 | CG9769-RA | 1..1310 | 1..1311 | 6515 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 538591..539905 | 1316..1 | 6530 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 4712878..4714196 | 1320..1 | 6550 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 4453709..4455027 | 1320..1 | 6560 | 99.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 538591..539905 | 1..1316 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9769-RA | 1..843 | 112..954 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9769-RA | 1..843 | 112..954 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9769-RA | 1..843 | 112..954 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9769-RA | 1..843 | 112..954 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9769-RA | 1..843 | 112..954 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9769-RA | 1..1058 | 1..1058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9769-RA | 1..1058 | 1..1058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9769-RA | 1..1301 | 15..1316 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9769-RA | 1..1058 | 1..1058 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9769-RA | 1..1301 | 15..1316 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4712882..4714196 | 1..1316 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4712882..4714196 | 1..1316 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4712882..4714196 | 1..1316 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 538604..539918 | 1..1316 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4453713..4455027 | 1..1316 | 99 | Minus |
Translation from 111 to 953
> LD47792.pep MSALNLTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSVDKGVVEVTNC FCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSS VIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTP IPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQ SLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNAN VRNLLLVITLSQLIKTQLQLNEKLTFLPTA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16095-PA | 280 | GF16095-PA | 1..280 | 1..280 | 1472 | 98.2 | Plus |
Dana\GF11048-PA | 285 | GF11048-PA | 7..283 | 4..278 | 648 | 44.8 | Plus |
Dana\GF13608-PA | 354 | GF13608-PA | 11..275 | 8..270 | 227 | 28.9 | Plus |
Dana\GF18860-PA | 344 | GF18860-PA | 51..314 | 2..265 | 151 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11433-PA | 280 | GG11433-PA | 1..280 | 1..280 | 1496 | 100 | Plus |
Dere\GG23198-PA | 285 | GG23198-PA | 6..280 | 3..275 | 598 | 40.3 | Plus |
Dere\GG22963-PA | 338 | GG22963-PA | 11..275 | 8..270 | 227 | 29.3 | Plus |
Dere\GG11147-PA | 340 | GG11147-PA | 50..310 | 5..265 | 150 | 22.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18119-PA | 280 | GH18119-PA | 1..280 | 1..280 | 1469 | 97.9 | Plus |
Dgri\GH21473-PA | 283 | GH21473-PA | 5..281 | 8..278 | 579 | 42.1 | Plus |
Dgri\GH20991-PA | 345 | GH20991-PA | 1..275 | 1..270 | 227 | 29 | Plus |
Dgri\GH22436-PA | 344 | GH22436-PA | 54..314 | 5..265 | 149 | 22.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
eIF3f1-PA | 280 | CG9769-PA | 1..280 | 1..280 | 1453 | 100 | Plus |
eIF3f2-PA | 286 | CG8335-PA | 7..281 | 3..275 | 596 | 40.1 | Plus |
Rpn8-PC | 338 | CG3416-PC | 11..276 | 8..271 | 259 | 28.7 | Plus |
Rpn8-PA | 338 | CG3416-PA | 11..276 | 8..271 | 259 | 28.7 | Plus |
Rpn8-PB | 358 | CG3416-PB | 11..276 | 8..271 | 259 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23834-PA | 280 | GI23834-PA | 1..280 | 1..280 | 1446 | 95.7 | Plus |
Dmoj\GI19950-PA | 290 | GI19950-PA | 8..288 | 4..278 | 585 | 41.8 | Plus |
Dmoj\GI21325-PA | 340 | GI21325-PA | 1..275 | 1..270 | 228 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21488-PA | 280 | GL21488-PA | 1..280 | 1..280 | 1465 | 96.8 | Plus |
Dper\GL16249-PA | 288 | GL16249-PA | 3..283 | 1..275 | 594 | 41.2 | Plus |
Dper\GL20068-PA | 343 | GL20068-PA | 11..275 | 8..270 | 229 | 28.9 | Plus |
Dper\GL13811-PA | 347 | GL13811-PA | 57..317 | 5..265 | 152 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22021-PA | 280 | GA22021-PA | 1..280 | 1..280 | 1465 | 96.8 | Plus |
Dpse\GA25107-PA | 288 | GA25107-PA | 3..283 | 1..275 | 593 | 41.2 | Plus |
Dpse\GA17437-PA | 343 | GA17437-PA | 11..275 | 8..270 | 229 | 28.9 | Plus |
Dpse\GA19964-PA | 347 | GA19964-PA | 57..317 | 5..265 | 152 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10688-PA | 280 | GM10688-PA | 1..280 | 1..280 | 1496 | 100 | Plus |
Dsec\GM16538-PA | 285 | GM16538-PA | 4..280 | 5..275 | 611 | 41.2 | Plus |
Dsec\GM11856-PA | 338 | GM11856-PA | 11..275 | 8..270 | 227 | 29.3 | Plus |
Dsec\GM26445-PA | 341 | GM26445-PA | 51..311 | 5..265 | 150 | 22.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19663-PA | 280 | GD19663-PA | 1..280 | 1..280 | 1496 | 100 | Plus |
Dsim\GD10400-PA | 285 | GD10400-PA | 4..280 | 5..275 | 609 | 40.9 | Plus |
Dsim\GD11854-PA | 338 | GD11854-PA | 11..275 | 8..270 | 227 | 29.3 | Plus |
Dsim\CSN6-PA | 341 | GD20964-PA | 51..311 | 5..265 | 150 | 22.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23292-PA | 280 | GJ23292-PA | 1..280 | 1..280 | 1475 | 97.9 | Plus |
Dvir\GJ17826-PA | 290 | GJ17826-PA | 8..288 | 4..278 | 579 | 41.1 | Plus |
Dvir\GJ21597-PA | 343 | GJ21597-PA | 1..275 | 1..270 | 228 | 28.6 | Plus |
Dvir\GJ23049-PA | 340 | GJ23049-PA | 50..310 | 5..265 | 150 | 22.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14430-PA | 280 | GK14430-PA | 1..280 | 1..280 | 1476 | 97.9 | Plus |
Dwil\GK21334-PA | 286 | GK21334-PA | 11..284 | 8..278 | 631 | 43.3 | Plus |
Dwil\GK22207-PA | 342 | GK22207-PA | 1..275 | 1..270 | 232 | 29 | Plus |
Dwil\GK11302-PA | 338 | GK11302-PA | 48..308 | 5..265 | 159 | 22.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25339-PA | 280 | GE25339-PA | 1..280 | 1..280 | 1491 | 99.6 | Plus |
Dyak\GE20747-PA | 279 | GE20747-PA | 5..274 | 8..275 | 621 | 42.3 | Plus |
Dyak\GE14400-PA | 338 | GE14400-PA | 11..275 | 8..270 | 227 | 28.9 | Plus |
Dyak\GE10312-PA | 340 | GE10312-PA | 50..310 | 5..265 | 150 | 22.9 | Plus |
Translation from 111 to 953
> LD47792.hyp MSALNLTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSVDKGVVEVTNC FCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSS VIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTP IPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQ SLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNAN VRNLLLVITLSQLIKTQLQLNEKLTFLPTA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9769-PA | 280 | CG9769-PA | 1..280 | 1..280 | 1453 | 100 | Plus |
CG8335-PA | 286 | CG8335-PA | 7..281 | 3..275 | 596 | 40.1 | Plus |
Rpn8-PC | 338 | CG3416-PC | 11..276 | 8..271 | 259 | 28.7 | Plus |
Rpn8-PA | 338 | CG3416-PA | 11..276 | 8..271 | 259 | 28.7 | Plus |
Rpn8-PB | 358 | CG3416-PB | 11..276 | 8..271 | 259 | 28.7 | Plus |