BDGP Sequence Production Resources |
Search the DGRC for LD47795
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 477 |
Well: | 95 |
Vector: | pOT2 |
Associated Gene/Transcript | CG12006-RA |
Protein status: | LD47795.pep: gold |
Preliminary Size: | 2350 |
Sequenced Size: | 2245 |
Gene | Date | Evidence |
---|---|---|
CG12006 | 2001-01-01 | Release 2 assignment |
CG12006 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12006 | 2003-01-14 | Blastp of sequenced clone |
CG12006 | 2008-04-29 | Release 5.5 accounting |
CG12006 | 2008-08-15 | Release 5.9 accounting |
CG12006 | 2008-12-18 | 5.12 accounting |
2245 bp (2245 high quality bases) assembled on 2003-01-14
GenBank Submission: BT003240
> LD47795.complete TTTTGCTTTGCACTGCTTTCGCGTTATTTTTAGCCGCTTTTTTTGCCGAA ACGATTTTTTTGGTGGCTAAAAGCCATCGCAATTTCCACCAAATCTGACC GGTTGGTAAACCACCAACGCACGCAACTATTTAAGGTGACTCAAAACCAT CCGGTTTTCCGGGTGGCCACAATTTTGCGTTTTTGGACCAACGCGGCGTT ATTATAATGAAGCTGATCTACGTGTTTCTCCTAATCTTGGCCGTGCGCTT GGCCTCTGTTTTCGTGGTCCAAACATATTACGTTCCGGATGAATACTGGC AGAGTTTAGAAGTGGCCCACAAACTGACCTTTGGCTATGGCTACCTGACT TGGGAATGGGTTCAGGGCATTCGCAGCTATGTGTACCCCCTGCTGATCGC CGGACTCTATAAAATCCTGGCCCTCCTGCAATTGGATAGTGCCCACCTTC TGGTTGTGCTGCCAAGGATTGTACAGGCTCTGCTTTCGGCCTACTCCGAC TATCGCTTCTTTGTGTGGACGGGCAAGCGAAAGTGGGCGCTGTTTCTGAT CCTGGTCCCGTGGTTCTGGTTCTACACGGGCTCGCGCACTCTGGCCAACA CATTGGAAGCCTCCCTGACAACGATTGCGTTGAGCTACTTCCCCTGGTAT GGCGAATCCACTGCTTACCTGTGGCCAGCTGCCATCTGCTGCTTCCTGAG ACCTACGGCTGCTGTTATTTGGCTCCCATTATCCTTGTATCATCTGCGCA GAAGTCGCCAGAACGTGCTGGAGCTGATCCTGAAGCGATTTGTGCTCATT GGTTTACTCGTTGCTGGTCTGGGAATAGCCATCGATACCTATTGGCATGG CCAGTTGATAGTGACTCCGTACGAGTTCCTCAAGTACAACATATTTAACA ACATCGGCAGCTTCTATGGCTCACACCCTTGGCACTGGTACTTCAGCGTG GGCTTGCCCACAGTCCTGGGCATCAACACCTTGCCCTTCATCTTTGGCGT GATGGAAACTGTGAAGAAGTCGGAGAAGTACCCTGTTAGCAAGCAGCTTC TGATCACCATCTTCCTGACTCTGGTTGTTCTGAGTGCTGTGGAGCACAAG GAGTTTCGATTTGTTTCCCCGCTCCTGCCGCTCTGCTTGTACGTTATCAC AGATGCCCTATCGCGTTGGAGCATCAGAGCCTCGAGCACAATGTTGTGGA CCACCGCTTTGGTCATTCTCGTGGGCAATGTTATGCCCGCCTGGTATCTG AGCACAGTGCATCAGAAGGGACCCATTGAACTGATGCCCAAGTTGAGAGA AATAGCTCGGGAATACAGAGATGAACGCGAACACCAGGCGAATATTCTCT TCCTAATGCCTTGCCACTCCACACCATACTATAGTCACATTCACCAGAAT GTCACCATGAGGTTTTTGACTTGCGAACCGAACCTGGAAAAGAAGGAGCA GTATAAGGACGAGGCCGATCGCTTCTTTGAGGATCCCGTGCACTGGATTA ACTCGCACATTCCTATGCATCCGCTCACCGCTTTGCCCACACATGTGGTT CTGTTCGATCCGCTGGCCGAGAACATAAGCGTGTTCCTCCGTAACTACCG GCTGCTCCATCGCATCGAGCACGCAGAGGTAACACGGCTGGAGGGCTCGC AGGCTCTGGTGGACCAGTGGTCGGAGGCACTGGGTGCCCAGTCACCTAAT CTTGCTTCTCTCTTGCAGAATCGCCAATCGCGCACAGGTCGTTCCATTTT GGTCTACCAGCGCTTGAAGAAGGGCGAGGAGAATGCATTTAATCGCGGGC CGGATTCAGGACAGCACGAGCCGGATGTCCACGATCATCCGCCGCTGGAG GATCTCGTCCTGGCCAACGAGAACGAGAATCTGTTCAATTAGATAATAGA GAAAATAAGAGAACCCACCACCGACGCCCTCCGTTCAAAAGCAAGAAGCA ATGACACATTTGAGATTAACTAATAGATACAAACCTATATTTTGTATCCA TTTTTGGCCTTAGCAAAAGTTTTTAAAACGTTGTCGCCCGAAGAGAACAG AAAACAGAAACGTAGTTGATATTCGTAGGCGCATGTTGTGTACTCTGTGC TAGTTGCTAATGTGTAAGCCATCTGAGTATTTAGACGCTAGAGGCAATGT ATTTTACGTAGTCGATACAACACACTTGATCTGTCCTTTCTTTAAGATCT CGAAATAAAGGTTCAGTGGAGTAGATAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12006-RA | 2390 | CG12006-RA | 100..2328 | 1..2229 | 11130 | 99.9 | Plus |
CG12006-RB | 2300 | CG12006-RB | 100..1727 | 1..1628 | 8125 | 99.9 | Plus |
CG12006.a | 2251 | CG12006.a | 204..1698 | 134..1628 | 7460 | 99.9 | Plus |
CG12006.a | 2251 | CG12006.a | 1697..2209 | 1717..2229 | 2565 | 100 | Plus |
CG12006-RB | 2300 | CG12006-RB | 1726..2238 | 1717..2229 | 2565 | 100 | Plus |
CG12006.a | 2251 | CG12006.a | 13..149 | 1..137 | 685 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 3812553..3813397 | 1382..2226 | 4180 | 99.6 | Plus |
chr3L | 24539361 | chr3L | 3811910..3812489 | 802..1381 | 2810 | 99 | Plus |
chr3L | 24539361 | chr3L | 3811380..3811852 | 330..802 | 2230 | 98.1 | Plus |
chr3L | 24539361 | chr3L | 3810911..3811111 | 134..334 | 960 | 98.5 | Plus |
chr3L | 24539361 | chr3L | 3810719..3810856 | 1..137 | 640 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 3813114..3813961 | 1382..2229 | 4240 | 100 | Plus |
3L | 28110227 | 3L | 3812471..3813053 | 802..1384 | 2915 | 100 | Plus |
3L | 28110227 | 3L | 3811941..3812413 | 330..802 | 2350 | 99.8 | Plus |
3L | 28110227 | 3L | 3811472..3811672 | 134..334 | 990 | 99.5 | Plus |
3L | 28110227 | 3L | 3811281..3811417 | 1..137 | 685 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 3813114..3813961 | 1382..2229 | 4240 | 100 | Plus |
3L | 28103327 | 3L | 3812471..3813053 | 802..1384 | 2915 | 100 | Plus |
3L | 28103327 | 3L | 3811941..3812413 | 330..802 | 2350 | 99.7 | Plus |
3L | 28103327 | 3L | 3811472..3811672 | 134..334 | 990 | 99.5 | Plus |
3L | 28103327 | 3L | 3811281..3811417 | 1..137 | 685 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 5362..5485 | 2105..1987 | 130 | 59.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 3810719..3810854 | 1..135 | 99 | -> | Plus |
chr3L | 3810913..3811111 | 136..334 | 98 | -> | Plus |
chr3L | 3811385..3811852 | 335..802 | 98 | -> | Plus |
chr3L | 3811911..3812492 | 803..1384 | 98 | -> | Plus |
chr3L | 3812556..3813397 | 1385..2226 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12006-RA | 1..1686 | 207..1892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12006-RA | 1..1686 | 207..1892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12006-RA | 1..1686 | 207..1892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12006-RA | 1..1686 | 207..1892 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12006-RA | 13..2238 | 1..2226 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12006-RA | 13..2238 | 1..2226 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12006-RA | 19..2244 | 1..2226 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12006-RA | 13..2238 | 1..2226 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12006-RA | 19..2244 | 1..2226 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3811281..3811415 | 1..135 | 100 | -> | Plus |
3L | 3811474..3811672 | 136..334 | 99 | -> | Plus |
3L | 3811946..3812413 | 335..802 | 100 | -> | Plus |
3L | 3812472..3813053 | 803..1384 | 100 | -> | Plus |
3L | 3813117..3813958 | 1385..2226 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3811281..3811415 | 1..135 | 100 | -> | Plus |
3L | 3811474..3811672 | 136..334 | 99 | -> | Plus |
3L | 3811946..3812413 | 335..802 | 100 | -> | Plus |
3L | 3812472..3813053 | 803..1384 | 100 | -> | Plus |
3L | 3813117..3813958 | 1385..2226 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3811281..3811415 | 1..135 | 100 | -> | Plus |
3L | 3811474..3811672 | 136..334 | 99 | -> | Plus |
3L | 3811946..3812413 | 335..802 | 100 | -> | Plus |
3L | 3812472..3813053 | 803..1384 | 100 | -> | Plus |
3L | 3813117..3813958 | 1385..2226 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 3811474..3811672 | 136..334 | 99 | -> | Plus |
arm_3L | 3811281..3811415 | 1..135 | 100 | -> | Plus |
arm_3L | 3811946..3812413 | 335..802 | 100 | -> | Plus |
arm_3L | 3812472..3813053 | 803..1384 | 100 | -> | Plus |
arm_3L | 3813117..3813958 | 1385..2226 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3811946..3812413 | 335..802 | 100 | -> | Plus |
3L | 3812472..3813053 | 803..1384 | 100 | -> | Plus |
3L | 3813117..3813958 | 1385..2226 | 100 | Plus | |
3L | 3811281..3811415 | 1..135 | 100 | -> | Plus |
3L | 3811474..3811672 | 136..334 | 99 | -> | Plus |
Translation from 206 to 1891
> LD47795.hyp MKLIYVFLLILAVRLASVFVVQTYYVPDEYWQSLEVAHKLTFGYGYLTWE WVQGIRSYVYPLLIAGLYKILALLQLDSAHLLVVLPRIVQALLSAYSDYR FFVWTGKRKWALFLILVPWFWFYTGSRTLANTLEASLTTIALSYFPWYGE STAYLWPAAICCFLRPTAAVIWLPLSLYHLRRSRQNVLELILKRFVLIGL LVAGLGIAIDTYWHGQLIVTPYEFLKYNIFNNIGSFYGSHPWHWYFSVGL PTVLGINTLPFIFGVMETVKKSEKYPVSKQLLITIFLTLVVLSAVEHKEF RFVSPLLPLCLYVITDALSRWSIRASSTMLWTTALVILVGNVMPAWYLST VHQKGPIELMPKLREIAREYRDEREHQANILFLMPCHSTPYYSHIHQNVT MRFLTCEPNLEKKEQYKDEADRFFEDPVHWINSHIPMHPLTALPTHVVLF DPLAENISVFLRNYRLLHRIEHAEVTRLEGSQALVDQWSEALGAQSPNLA SLLQNRQSRTGRSILVYQRLKKGEENAFNRGPDSGQHEPDVHDHPPLEDL VLANENENLFN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12006-PA | 561 | CG12006-PA | 1..561 | 1..561 | 2975 | 100 | Plus |
CG12006-PB | 531 | CG12006-PB | 1..531 | 1..561 | 2788 | 94.7 | Plus |
CG11851-PA | 623 | CG11851-PA | 102..416 | 30..329 | 164 | 26.4 | Plus |
Translation from 206 to 1891
> LD47795.pep MKLIYVFLLILAVRLASVFVVQTYYVPDEYWQSLEVAHKLTFGYGYLTWE WVQGIRSYVYPLLIAGLYKILALLQLDSAHLLVVLPRIVQALLSAYSDYR FFVWTGKRKWALFLILVPWFWFYTGSRTLANTLEASLTTIALSYFPWYGE STAYLWPAAICCFLRPTAAVIWLPLSLYHLRRSRQNVLELILKRFVLIGL LVAGLGIAIDTYWHGQLIVTPYEFLKYNIFNNIGSFYGSHPWHWYFSVGL PTVLGINTLPFIFGVMETVKKSEKYPVSKQLLITIFLTLVVLSAVEHKEF RFVSPLLPLCLYVITDALSRWSIRASSTMLWTTALVILVGNVMPAWYLST VHQKGPIELMPKLREIAREYRDEREHQANILFLMPCHSTPYYSHIHQNVT MRFLTCEPNLEKKEQYKDEADRFFEDPVHWINSHIPMHPLTALPTHVVLF DPLAENISVFLRNYRLLHRIEHAEVTRLEGSQALVDQWSEALGAQSPNLA SLLQNRQSRTGRSILVYQRLKKGEENAFNRGPDSGQHEPDVHDHPPLEDL VLANENENLFN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24224-PA | 523 | GF24224-PA | 1..510 | 1..540 | 2273 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15159-PA | 531 | GG15159-PA | 1..531 | 1..561 | 2694 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16427-PA | 522 | GH16427-PA | 1..522 | 1..561 | 2196 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PIG-B-PA | 561 | CG12006-PA | 1..561 | 1..561 | 2975 | 100 | Plus |
PIG-B-PB | 531 | CG12006-PB | 1..531 | 1..561 | 2788 | 94.7 | Plus |
CG11851-PA | 623 | CG11851-PA | 102..416 | 30..329 | 164 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12509-PA | 518 | GI12509-PA | 1..518 | 1..561 | 2204 | 74 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21004-PA | 756 | GL21004-PA | 1..402 | 1..402 | 1871 | 86.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11329-PA | 519 | GA11329-PA | 1..516 | 1..544 | 2236 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14587-PA | 531 | GM14587-PA | 1..531 | 1..561 | 2729 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13779-PA | 555 | GD13779-PA | 59..555 | 35..561 | 2512 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12415-PA | 519 | GJ12415-PA | 1..519 | 1..561 | 2204 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20524-PA | 521 | GK20524-PA | 1..521 | 1..561 | 2160 | 74.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21379-PA | 527 | GE21379-PA | 1..527 | 1..561 | 2655 | 90.2 | Plus |