Clone LD47924 Report

Search the DGRC for LD47924

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:479
Well:24
Vector:pOT2
Associated Gene/Transcriptcup-RB
Protein status:LD47924.pep: gold
Preliminary Size:3741
Sequenced Size:4023

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11199 2001-01-01 Release 2 assignment
CG11181 2001-01-01 Release 2 assignment
CG11188 2001-01-01 Release 2 assignment
CG11201 2001-01-01 Release 2 assignment
CG11221 2001-01-01 Release 2 assignment
CG11181 2001-11-29 Blastp of sequenced clone
cup 2008-04-29 Release 5.5 accounting
cup 2008-08-15 Release 5.9 accounting
CG34310 2008-08-15 Release 5.9 accounting
cup 2008-12-18 5.12 accounting
CG34310 2008-12-18 5.12 accounting

Clone Sequence Records

LD47924.complete Sequence

4023 bp (4023 high quality bases) assembled on 2001-11-29

GenBank Submission: AY069707

> LD47924.complete
CCGAATAACGGATCCTAAGATCGAACGAACCTGTGCTAAACGTGATTTCG
TTCAATTTCTCATACATTTCAATATATTTGACCCGATCAAAAGTACTCGT
TTTAAGTTTTAACCAAAAAAAAAACCAACAATTAGTGAGTATGGACCCTA
TGAAAGAGGAGGCGATCGAATTGAATGGCCATGCTATGCAAATGGCCGAA
GCTGAGCAAGAAAATGGCGCTGGCGCCCTGAAAATTGCCACCAATGCGGG
TGCAACCGATCGTCCAGCGCATCAGCAGCTTCCGCTGCCAGTCGAAGATC
AGCAGGATGAGGTGCTGACCCCCGCTGAGAAGGGCAAGTTCGAGTACCCG
CCCCCTCCACCGCCACCAACTCCAGTCCAGGCTCCGCTAGCCACCAAGGC
CACCGCTCTGAATGCCAGTCAAGAGCATGACGACGACGAGGCCAACTCCG
AGAAGTGGGAGGATCCGTGCGCTCCGCCCCCGCCTCCTCCGCTGCCGACT
AGCGCTTTCCTGGCCACCGGACTGGGCTACCTCAAGCTGCCCGCCTTCAA
GCTGAAGGACGCACTGGAGAAGGCCATCACCAAGTTGGAGGCCAACAAGC
GGACGCTAAAGGCCAGCCCTGAGTCTTCTCGTTCCATCAAAAACAAGAAT
GTGGTGGCCCTGGAGATGTTACCCAGGCGCTCAAACCCAGAAACGATCGG
CGATGGATCCATGTTGGCATCCACATCCACGGCTGTTATGCTGCAGACCA
AAAAGCCCGCCGTTATTGTGGAGATGGAGAGGCGTTGTAAGATCATCAAT
TTACTGGCCAAACAGAATCAAATCCTCGAATCCATTTCGGGGGAGGCCAT
TCCGATGCATGGACCCTCGAAGCATCTGCACGAGGACGAGGGTCTGACCC
TGCAAGTTCTCTCGGCCCGAGCATCCACACCGTACACACAGCCCTCCAGC
ATGTTGTCCTGCACGGCCGTTAGTTGTGACCTGGAGCACGATTCGCCGCG
GAAGCAAGTGGCCAGCAAGGAGGCCGTGCCGGAGCAGCAGTCTAGTCAGG
TGCAGCAAAAGCGTCCACCCAGCACAGGCATTCACAAGCCAGGAAGTCTG
CGAGCACCCAAGGCTGTTCGTCCTACTACTGCTCCGGTGGTCAGCAGCAA
GCCGGTCAAGAGCTATACCCGCTCCCGCCTGATGGACATTCGCAACGGGA
TGTTCAATGCCCTGATGCACAGGTCCAAGGAGAGCTTTGTGATGCCTCGC
ATCGCCACCTGCGACGACATTGAGTTGGAGGGAAGGCTTCGCCGCATGAA
TATTTGGCGCACCTCGGACGGCACAAGATTCCGGACCCGCTCCACCACAG
CTAACTTAAACATGAACAACAACAACAACAATGAGTGCATGCCTGCCTTC
TTCAAAAACAAAAATAAGCCGAACCTAATCAGTGACGAGTCCATCATCCA
GAGCCAACCGCCCCAGCCGCAAACGGAGTTCCAAGATCCGGCCATTGTTA
ACCAAAGACGCATTGGCAGCGGTCGCTTAAACCATTCCAAGTGGGGTTAC
AACGACGAAGACTACCACTCGTACCACAATGGCAAGTCGCAGCATATGGA
GGAGGTCAACTCGAAGAACAGCAAAAACATGACGGTGCTGCAGTTCTTCG
ACAACGGCGAGATCAGCAGTCAGCCTCAAAGACGGCCGAACACTCCTGTG
ATGGGGATGTCTATCAATCGATCCGAGAACGACACCCTGCACTCGAACGA
GTCCAGTGAAGATTTGAGTCGCGCCAACGAGAACTATGTAAAGCGCGTAA
TGTCTGGATTCCTGGTTGTATCGAAGCCCAAGTCACGAGATGTCGAGGAT
AGACATCACCGGCGGTACAGGAACCAGAACGAGGAGCCTGAGTGGTTTAG
CTGTGGACCCACGTCTAGACTGGACACTATAGAGTTGTGTGGGTTCGATG
AGGACGAGGAGAAAATGCTAAAGGAGGGCAACAAAAACCACGGATTAGGC
GAAACAGAGCGAGAAACGTCAAAACAAAAGATGGACCATAAGTACAAATG
GACGCATGCGGAGCCGATGGGTCGAAGCAAATACATGCCCAAACACGACA
CTAACAATAATCATAACGTGGAGAACATGAATAATGTTATGGCTACCGAG
CATCAGCAACAAAAGGAAGAGAAACGCCCAGGCAGTGGCCGTTCGTTTCA
GTTTGATAAGTTCAATCAAAGCCAACAGAATTACGAGAGTAGCAGTTATG
TTAATCACCAACAGCCGCCGCAAACGCAGCCTCAGCAAATGCAGCAGCAG
TCGAACACAAACACGAACAACTCTAAATTCATGTCATTCTTTGCCAATGA
GGGGAACTCCTCGTCTTCTTCGCTGAACGAGTTTTTCAAGCAGGCCATTA
ACCAGGGTCATGGCAACAATCCGGAGCAGCCCAAATCGTTGGGCCACATC
GGACAGATGCCTTCGGTGGATCAGCTGGAGGCCAAATGGCGTCGAAACTC
ACTGAACAATGTTGGCGAGACTGCCAACAAGCAGACTGATAACTTCCAGA
AGCTAATTGGGTCTCTTTCTTCGGCTAAGCCACAGTCACAGGCGGTTGGC
TATGATGCCATCTCCAACTTTATAATGCAGCAACAGCAGTACCAGCAGCA
GCAACAGAAGCAGCACCTCATCATACAGCAGCAGCAGCAACATACCGCCT
TTTTGGCGAGCCTGCAGCTGAAGGCGATCCTCGGCCGGGCCGACACCCAA
TTGCTACTGCTCCGTCTGACTAAAGGGGAAATATCCAAGCACGGATTGCT
GGTGCAGTTGGCCAACCCACGCTTGACGGACATGGATCGCGAGGCCATCA
CTGCTGTATTGCAGTTCACCAACACCCAGCAGCAGCAGCAGCAGCACAAG
CAGCAGCTGGACATGCTCTCAAGCACGGTCATCGCCAGCCAGTTGCAGAA
TCTCCACAACTTGGCCATTGTCCAGCAGACTCTTGCAGCCAGGCAGCAGC
CGCAGCATAATCCACAGACGCAGGCGCCGCACCAACTGTCGCAGGAGGAC
TTGCAAGCGCATGCCAATGTGATAATGCGAAACGCCGTAATGAAGCGAAA
AATTGAGGAGCAGACCTCGAAGCTTATCAATGGCGGTGCCAAGCATCAGG
CACAGCAGCAATATCTAAACCGTGGCCAGCAACGCCAGGCTCGACCAGAT
GCCAACTCGAATGCCTTGCTCCATGCCTTGATCTCTGGCGGTGGCAATAA
CCACGCCTCTGGTTATCCTATGAATGGACAGCCGCAGAAGCATCATTCCA
ATTTGAGATTCGGTGATAACCAAAACTTCCAATCTTTTGAGTCCAACCAG
CCGCACTTCGCCACGCAGTACAAGCAGCAATACCAACAGTCTCAGCAGCA
ACATCCCCATCAGCAGCCCCAACAGCTGAATTCGCTTCATCAGAACAACG
CTGGAGCTGTCAATAGCTTCAATAAGGCCCAAATGCAAGCTCAATCAGCT
ATTTCCATGCTGCCCAACAGCGGGGATGAGTTTCATTAACGGCTTCAAAA
GATTCGCCACAACGACGGTTGGTCTGATGGCCATCGGTATTGGATCGACT
GTTATATTCTACACCACCCATCGCCTTGTCATCAAACCCTATCTTCTCGA
GAAACGACGCCTGGAAGCCGAGGCCAGTGCGGAGTACCTCTTCCAGCAGG
AGGTTCACTCCCAGATTGGCGAGTCAAGACCCAAACGGAGCGAATATTGA
GCCAAGGCTGCCAGTGCCGTCATAGACATCTTTACATACTTATAGCCTAG
TGATTAGTTACCAAATTTCAACGCTGTAACATGGTGAACAATGAATGGAC
TTTTACTTTCTTACCTTCACTTTGGGTGGAGAGGCCCATCTTCTTGTGTT
CATTTTAGAGTTAAACAGAATGGATTTTTTATGAAAGTAATATGAATTGA
ATAAATAATGAAAAGCAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAGA
AAAAAAAAAAAAAAAAAAAAAAA

LD47924.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:55:00
Subject Length Description Subject Range Query Range Score Percent Strand
cup-RB 4042 cup-RB 28..3998 1..3971 19840 99.9 Plus
CG34310-RA 491 CG34310-RA 267..491 3526..3750 1125 100 Plus
CG34310-RB 486 CG34310-RB 267..486 3531..3750 1100 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:30:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 6663990..6664853 622..1485 4305 99.9 Plus
chr2L 23010047 chr2L 6668822..6669573 2774..3525 3745 99.9 Plus
chr2L 23010047 chr2L 6668004..6668751 2029..2776 3710 99.7 Plus
chr2L 23010047 chr2L 6663022..6663644 1..623 3115 100 Plus
chr2L 23010047 chr2L 6667402..6667947 1485..2030 2730 100 Plus
chr2L 23010047 chr2L 6673360..6673806 3525..3971 2220 99.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:45:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:30:48
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6664929..6665792 622..1485 4320 100 Plus
2L 23513712 2L 6669762..6670513 2774..3525 3760 100 Plus
2L 23513712 2L 6668944..6669691 2029..2776 3740 100 Plus
2L 23513712 2L 6663965..6664587 1..623 3115 100 Plus
2L 23513712 2L 6668342..6668887 1485..2030 2730 100 Plus
2L 23513712 2L 6674300..6674746 3525..3971 2220 99.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:20:30
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6664929..6665792 622..1485 4320 100 Plus
2L 23513712 2L 6669762..6670513 2774..3525 3760 100 Plus
2L 23513712 2L 6668944..6669691 2029..2776 3740 100 Plus
2L 23513712 2L 6663965..6664587 1..623 3115 100 Plus
2L 23513712 2L 6668342..6668887 1485..2030 2730 100 Plus
2L 23513712 2L 6674300..6674746 3525..3971 2220 99.7 Plus
Blast to na_te.dros performed 2019-03-16 11:30:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2712..2985 3294..3566 206 56.4 Plus
Dbuz\INE-1 1467 Dbuz\INE-1 ISBU1 1467bp 132..199 3933..3998 172 76.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6759..6882 3373..3493 170 64 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6805..6890 3365..3449 166 67.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6738..6791 3373..3426 162 77.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2440..2517 3373..3449 153 67.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6719..6820 3369..3475 153 67 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6788..6897 3366..3474 151 65.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6780..6852 3373..3445 149 67.1 Plus
roo 9092 roo DM_ROO 9092bp 1087..1176 3365..3448 149 65.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2330..2391 3365..3426 148 71 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1502..1587 3361..3441 139 66.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1540..1591 3373..3423 131 75 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2365..2519 3346..3494 129 60.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2602..2691 3346..3432 128 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6834..6891 3373..3430 128 69 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2308..2385 3373..3449 127 67.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6707..6826 3377..3501 125 62.2 Plus

LD47924.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:31:46 Download gff for LD47924.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 6663022..6663644 1..623 100 -> Plus
chr2L 6663992..6664852 624..1484 99 -> Plus
chr2L 6667402..6667947 1485..2030 100 -> Plus
chr2L 6668006..6668601 2031..2626 99 == Plus
chr2L 6668669..6668750 2694..2775 100 -> Plus
chr2L 6668824..6669573 2776..3525 95 -> Plus
chr2L 6673361..6673795 3526..3960 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:28:34 Download gff for LD47924.complete
Subject Subject Range Query Range Percent Splice Strand
cup-RB 1..3354 186..3539 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:26:04 Download gff for LD47924.complete
Subject Subject Range Query Range Percent Splice Strand
cup-RB 1..3354 186..3539 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:55:14 Download gff for LD47924.complete
Subject Subject Range Query Range Percent Splice Strand
cup-RB 1..3354 186..3539 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:53:22 Download gff for LD47924.complete
Subject Subject Range Query Range Percent Splice Strand
cup-RB 1..3354 186..3539 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:19:26 Download gff for LD47924.complete
Subject Subject Range Query Range Percent Splice Strand
cup-RB 1..3354 186..3539 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:28:34 Download gff for LD47924.complete
Subject Subject Range Query Range Percent Splice Strand
cup-RB 1..3960 1..3960 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:26:04 Download gff for LD47924.complete
Subject Subject Range Query Range Percent Splice Strand
cup-RB 1..3960 1..3960 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:55:14 Download gff for LD47924.complete
Subject Subject Range Query Range Percent Splice Strand
cup-RB 1..3957 4..3960 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:53:23 Download gff for LD47924.complete
Subject Subject Range Query Range Percent Splice Strand
cup-RB 1..3960 1..3960 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:19:26 Download gff for LD47924.complete
Subject Subject Range Query Range Percent Splice Strand
cup-RC 302..4261 1..3960 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:31:46 Download gff for LD47924.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6663965..6664587 1..623 100 -> Plus
2L 6664931..6665791 624..1484 100 -> Plus
2L 6668342..6668887 1485..2030 100 -> Plus
2L 6668946..6669690 2031..2775 100 -> Plus
2L 6669764..6670513 2776..3525 100 -> Plus
2L 6674301..6674735 3526..3960 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:31:46 Download gff for LD47924.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6663965..6664587 1..623 100 -> Plus
2L 6664931..6665791 624..1484 100 -> Plus
2L 6668342..6668887 1485..2030 100 -> Plus
2L 6668946..6669690 2031..2775 100 -> Plus
2L 6669764..6670513 2776..3525 100 -> Plus
2L 6674301..6674735 3526..3960 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:31:46 Download gff for LD47924.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6663965..6664587 1..623 100 -> Plus
2L 6664931..6665791 624..1484 100 -> Plus
2L 6668342..6668887 1485..2030 100 -> Plus
2L 6668946..6669690 2031..2775 100 -> Plus
2L 6669764..6670513 2776..3525 100 -> Plus
2L 6674301..6674735 3526..3960 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:55:14 Download gff for LD47924.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6663965..6664587 1..623 100 -> Plus
arm_2L 6664931..6665791 624..1484 100 -> Plus
arm_2L 6668342..6668887 1485..2030 100 -> Plus
arm_2L 6668946..6669690 2031..2775 100 -> Plus
arm_2L 6669764..6670513 2776..3525 100 -> Plus
arm_2L 6674301..6674735 3526..3960 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:29:29 Download gff for LD47924.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6663965..6664587 1..623 100 -> Plus
2L 6664931..6665791 624..1484 100 -> Plus
2L 6668342..6668887 1485..2030 100 -> Plus
2L 6668946..6669690 2031..2775 100 -> Plus
2L 6669764..6670513 2776..3525 100 -> Plus
2L 6674301..6674735 3526..3960 100   Plus

LD47924.pep Sequence

Translation from 140 to 3538

> LD47924.pep
MDPMKEEAIELNGHAMQMAEAEQENGAGALKIATNAGATDRPAHQQLPLP
VEDQQDEVLTPAEKGKFEYPPPPPPPTPVQAPLATKATALNASQEHDDDE
ANSEKWEDPCAPPPPPPLPTSAFLATGLGYLKLPAFKLKDALEKAITKLE
ANKRTLKASPESSRSIKNKNVVALEMLPRRSNPETIGDGSMLASTSTAVM
LQTKKPAVIVEMERRCKIINLLAKQNQILESISGEAIPMHGPSKHLHEDE
GLTLQVLSARASTPYTQPSSMLSCTAVSCDLEHDSPRKQVASKEAVPEQQ
SSQVQQKRPPSTGIHKPGSLRAPKAVRPTTAPVVSSKPVKSYTRSRLMDI
RNGMFNALMHRSKESFVMPRIATCDDIELEGRLRRMNIWRTSDGTRFRTR
STTANLNMNNNNNNECMPAFFKNKNKPNLISDESIIQSQPPQPQTEFQDP
AIVNQRRIGSGRLNHSKWGYNDEDYHSYHNGKSQHMEEVNSKNSKNMTVL
QFFDNGEISSQPQRRPNTPVMGMSINRSENDTLHSNESSEDLSRANENYV
KRVMSGFLVVSKPKSRDVEDRHHRRYRNQNEEPEWFSCGPTSRLDTIELC
GFDEDEEKMLKEGNKNHGLGETERETSKQKMDHKYKWTHAEPMGRSKYMP
KHDTNNNHNVENMNNVMATEHQQQKEEKRPGSGRSFQFDKFNQSQQNYES
SSYVNHQQPPQTQPQQMQQQSNTNTNNSKFMSFFANEGNSSSSSLNEFFK
QAINQGHGNNPEQPKSLGHIGQMPSVDQLEAKWRRNSLNNVGETANKQTD
NFQKLIGSLSSAKPQSQAVGYDAISNFIMQQQQYQQQQQKQHLIIQQQQQ
HTAFLASLQLKAILGRADTQLLLLRLTKGEISKHGLLVQLANPRLTDMDR
EAITAVLQFTNTQQQQQQHKQQLDMLSSTVIASQLQNLHNLAIVQQTLAA
RQQPQHNPQTQAPHQLSQEDLQAHANVIMRNAVMKRKIEEQTSKLINGGA
KHQAQQQYLNRGQQRQARPDANSNALLHALISGGGNNHASGYPMNGQPQK
HHSNLRFGDNQNFQSFESNQPHFATQYKQQYQQSQQQHPHQQPQQLNSLH
QNNAGAVNSFNKAQMQAQSAISMLPNSGDEFH*

LD47924.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 10:23:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15440-PA 1115 GF15440-PA 1..1115 16..1132 3330 66.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:23:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10428-PA 1133 GG10428-PA 1..1133 1..1132 4627 85.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 10:23:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13346-PA 1258 GH13346-PA 9..1180 16..1071 1989 50.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:31:38
Subject Length Description Subject Range Query Range Score Percent Strand
cup-PC 1117 CG11181-PC 1..1117 16..1132 5841 100 Plus
cup-PB 1117 CG11181-PB 1..1117 16..1132 5841 100 Plus
4E-T-PH 979 CG32016-PH 195..877 439..1094 204 20.7 Plus
4E-T-PG 1010 CG32016-PG 195..908 439..1094 185 20.9 Plus
4E-T-PC 1010 CG32016-PC 195..908 439..1094 185 20.9 Plus
4E-T-PB 1010 CG32016-PB 195..908 439..1094 185 20.9 Plus
Smr-PF 3601 CG4013-PF 7..377 701..1120 167 24.9 Plus
Smr-PE 3601 CG4013-PE 7..377 701..1120 167 24.9 Plus
Smr-PD 3601 CG4013-PD 7..377 701..1120 167 24.9 Plus
Mur89F-PC 2158 CG4090-PC 310..725 391..818 165 19.1 Plus
Mur89F-PB 2159 CG4090-PB 310..725 391..818 165 19.1 Plus
CG10543-PD 1631 CG10543-PD 1085..1562 626..1093 163 22.4 Plus
CG10543-PE 1634 CG10543-PE 1088..1565 626..1093 163 22.4 Plus
CG10543-PA 1634 CG10543-PA 1088..1565 626..1093 163 22.4 Plus
CG10543-PF 1635 CG10543-PF 1089..1566 626..1093 163 22.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 10:23:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17732-PA 1365 GI17732-PA 128..1252 51..1033 2111 53.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 10:23:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26199-PA 1154 GL26199-PA 1..1154 16..1132 2787 60.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 10:23:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28070-PA 1154 GA28070-PA 1..1154 16..1132 2787 60.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:23:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16204-PA 1126 GM16204-PA 1..1126 1..1132 4986 93.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:23:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23426-PA 440 GD23426-PA 1..439 444..881 1972 95.2 Plus
Dsim\GD23425-PA 162 GD23425-PA 1..161 1..161 632 95.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 10:23:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17559-PA 1290 GJ17559-PA 5..1206 15..1071 2279 55.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 10:23:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18284-PA 1195 GK18284-PA 20..1132 16..1064 2303 54.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:23:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14055-PA 1142 GE14055-PA 1..1138 1..1128 4676 87.6 Plus

LD47924.hyp Sequence

Translation from 140 to 3538

> LD47924.hyp
MDPMKEEAIELNGHAMQMAEAEQENGAGALKIATNAGATDRPAHQQLPLP
VEDQQDEVLTPAEKGKFEYPPPPPPPTPVQAPLATKATALNASQEHDDDE
ANSEKWEDPCAPPPPPPLPTSAFLATGLGYLKLPAFKLKDALEKAITKLE
ANKRTLKASPESSRSIKNKNVVALEMLPRRSNPETIGDGSMLASTSTAVM
LQTKKPAVIVEMERRCKIINLLAKQNQILESISGEAIPMHGPSKHLHEDE
GLTLQVLSARASTPYTQPSSMLSCTAVSCDLEHDSPRKQVASKEAVPEQQ
SSQVQQKRPPSTGIHKPGSLRAPKAVRPTTAPVVSSKPVKSYTRSRLMDI
RNGMFNALMHRSKESFVMPRIATCDDIELEGRLRRMNIWRTSDGTRFRTR
STTANLNMNNNNNNECMPAFFKNKNKPNLISDESIIQSQPPQPQTEFQDP
AIVNQRRIGSGRLNHSKWGYNDEDYHSYHNGKSQHMEEVNSKNSKNMTVL
QFFDNGEISSQPQRRPNTPVMGMSINRSENDTLHSNESSEDLSRANENYV
KRVMSGFLVVSKPKSRDVEDRHHRRYRNQNEEPEWFSCGPTSRLDTIELC
GFDEDEEKMLKEGNKNHGLGETERETSKQKMDHKYKWTHAEPMGRSKYMP
KHDTNNNHNVENMNNVMATEHQQQKEEKRPGSGRSFQFDKFNQSQQNYES
SSYVNHQQPPQTQPQQMQQQSNTNTNNSKFMSFFANEGNSSSSSLNEFFK
QAINQGHGNNPEQPKSLGHIGQMPSVDQLEAKWRRNSLNNVGETANKQTD
NFQKLIGSLSSAKPQSQAVGYDAISNFIMQQQQYQQQQQKQHLIIQQQQQ
HTAFLASLQLKAILGRADTQLLLLRLTKGEISKHGLLVQLANPRLTDMDR
EAITAVLQFTNTQQQQQQHKQQLDMLSSTVIASQLQNLHNLAIVQQTLAA
RQQPQHNPQTQAPHQLSQEDLQAHANVIMRNAVMKRKIEEQTSKLINGGA
KHQAQQQYLNRGQQRQARPDANSNALLHALISGGGNNHASGYPMNGQPQK
HHSNLRFGDNQNFQSFESNQPHFATQYKQQYQQSQQQHPHQQPQQLNSLH
QNNAGAVNSFNKAQMQAQSAISMLPNSGDEFH*

LD47924.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:09:43
Subject Length Description Subject Range Query Range Score Percent Strand
cup-PC 1117 CG11181-PC 1..1117 16..1132 5841 100 Plus
cup-PB 1117 CG11181-PB 1..1117 16..1132 5841 100 Plus
4E-T-PH 979 CG32016-PH 195..877 439..1094 204 20.7 Plus
4E-T-PG 1010 CG32016-PG 195..908 439..1094 185 20.9 Plus
4E-T-PC 1010 CG32016-PC 195..908 439..1094 185 20.9 Plus