Clone LD47926 Report

Search the DGRC for LD47926

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:479
Well:26
Vector:pOT2
Associated Gene/Transcriptlmd-RB
Protein status:LD47926.pep: gold
Preliminary Size:3236
Sequenced Size:3201

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4677 2001-01-01 Release 2 assignment
CG4677 2003-01-01 Sim4 clustering to Release 3
CG4677 2003-02-15 Blastp of sequenced clone
lmd 2008-04-29 Release 5.5 accounting
lmd 2008-08-15 Release 5.9 accounting
lmd 2008-12-18 5.12 accounting

Clone Sequence Records

LD47926.complete Sequence

3201 bp (3201 high quality bases) assembled on 2003-02-15

GenBank Submission: AY121651

> LD47926.complete
CGCGGTGGCGTGAACATCGCAAGTGTTGAACTACATAGATACATAGAAAA
TCCTCCGACTTACGTGTGTGTTTAAGTGTTCGATTTTCTTGGGATTTCCC
GCGTTCGGTGGCCATAAAAAACAAACAAAAAAAAGAAGAAATATTGGCAA
TCTTCCCAGACAACTGCCGGAAATGCGAAAGTGAAAGCGGCCGGCCCAGA
AGAACGGACGACAGCAAATCACCAGAGACAGAGACATCGAAATATAGTAT
GTCATCCTCGCTGAAGACCAGCCAAAGTGGCGGCATGTACGTCAAGACGT
CGTCGATTTCGGGTATTTCGTCGATTTCTGGCAAGGAGGCGGCCAGTTGC
TACGGCGGATTTATGTCGCCTCCGCTGAGTGCCAATATAACGGCCAATAA
TGGGGAGCGGGAAATGTTCCGTGTGCCGGGAGCCAAGGTGGAAACGAATG
AAAGTTACGCCTGCGGTGAGCTGCAGTTTCCGGACTTTTCACACCTCTGC
TTTGCCGCCGAGACACCGAACTCCGTGTTCAGCGACTGTCACAACTATGC
TGGCCAGGATCAGCAGCAGGATTCGGATCAGGATGACATTGTCTGCGCAG
CGGCGGAAAATACGGGCATGCCCTATCAGCAGGGACAGTACACGCAACTG
AATCGCGAGGATATCTTCCGCTTCGAACCGGAGGACATAGCGCGTCTGAC
TGGCGAGTCCGAACTGCCCGGCATGTTGCAACATCCACAGACGCCATATA
CCCCATATACCCCTTACACACCCTACACACCGTGCAGTGCACAGAATAGT
CAGTATGCCGTGCAGCCGGCGAATGACTCCATTAATCTGGATATCGATTA
TTTTAATTACGACGAGATTAATTGCCAATCGAAAAACCAGTCACCGTGCT
CATCACCGCACCTCGACGCCTGGCTGAACTTCAATCTCGGCGAGATTTCA
GCGGCCGCATCATCGAGTGCCGCATCCCCGAAGTTGGGCAATGTGTTCGA
GGAGCAGGTCAAAGAGGAGGCCTCGCCGGCGAAACTGCCATCGATGAACT
CCACCTTCGGCACTCCCAAATGCATTCCCATGTGCGCCAGCAACTACGAG
GATTACGCGAATCTCTACCAACAGGGATCGGGGTATTCCACGGAGAACTA
CCACAACAATATGGCTCAGGTCGTCGAGAAGCCCAATCGCGAGCACAAGG
CCATCTGGACCATCGATGAACTGGATGAACTGATGTTGGGCGAGCAGCAG
CAGTTCCTTCAGCATCATCTGCAGCAGCAACACTTGCAGGAGCAGCAGGA
GCAACTGCATCAGCCACATGGGCAGGAACAGCAAACACAGAACTGCAAAG
ACGATCTGGTCAACTATCTATCGGATGAGTTCATCAAGGCCGAGGAGTTC
CGGAGCCTGGACAGTGACGATGACGAGAACTACAACGAGGAGGAGGATGA
CCTGGACAATGACGTGTTTGCCCCACCGGCGGAAAGTGATCCCAAGCCGG
ATTCAACCTGCTGTGATCCCGAGGCGGAGCCAGAGAATGAGGTCATCCCA
CTCATCTGCCGCTGGACGGGATGCGACGAGGAGTTCCCGCACCAACAGGC
CTTCGTCGAGCACATCGAGAAGTGCCATGTGGATGTGCGCAAGGGCGAGG
ACTTCTCCTGCTTCTGGCTAGACTGCCCCAGGCGCTACAAGCCCTTCAAT
GCCCGCTACAAGCTGCTCATCCACATGCGAGTTCACAGCGGCGAGAAGCC
CAACAAATGTCCGTTTCCCGGCTGCAATAAAGCATTCTCGCGTTTGGAAA
ATTTGAAAATTCATCAACGCTCGCACACGGGCGAGCGGCCTTATGGCTGC
CAGTATAAAGGTTGCCTCAAAGCGTTCAGCAATAGCTCGGATCGGGCGAA
ACATCAAAGGACCCACTACGATACGAAACCGTATGCCTGCCAGCTGCCTG
GATGCACCAAGCGCTACACGGATCCCTCCAGCCTCCGCAAACATGTCAAG
AACCACGCGCTGCGCAACGCCAACGGACAGCTGCGCCGCAAATCTGCCGG
CGGCGCTTCCGTACCGCCCTCCGGTCCAAAGAAGGCGGCCAAAACACGCC
GTCACTCCGAGTCGGCACTGGTGCAAAGGGGCGTGGGTGCGGGCGTGGGC
GTGGCCGTGCCAAGTGCTCCGGGGGATCAGCGACAACACCGCAGCAATAG
TTGCAGCGAGGCATTGCTGCTGCAGCAGCATCAACAGCAGCAGCAACAGC
AGCAGCAGCAGCAGAAGCAGCATCAGCCAGAAAACGAAAGGACGACAGAC
CGCAGCAATTGCGGCACCGGTGTTGCAGCTAATAACAATTCAATGAACTT
TAATGAGTTGTCAAATTGCATTGTCATCATCGAGCACAATCAGAGCGGAG
GTCCTGCAGGACCTGCAACACTGGCAACCGCAACAGCAACAACAACGGCA
ACAGCAACATATGGCAATGGCAACATGGCGCCCGCACCGGAAACGGAAGT
GCTGAGCGTTTGCAGCGGTGGCGGCAGCAGTAACAGTAACAGCAACAATA
ACCGTTACAATGCGAATATTAATCAATTAAGCGAACTCGAGCAATTGCTG
ACGACGGCGAAGCCCACAGGTACGCCAGCCGCATCTGCTAATGGAATTAG
CCTGGCCAACAATAATGGCCGCGCCAATGGTGACAGCAAATGCCACTTGA
GCGAGTTTGTGTCGTTCGAGTACGTGACAAAGTATCTGACGGATGTCTAC
GAGCCGCAATGCAAAAGCCCACAGCCCCCGGCTAATTTCCATTTGCAGCC
CGAATTTGACAACAGCTTCGACATGCTGGACTTCCCGCAGTTCATTTAAG
TTAGCTTAGTCCTTAGAACCAATTAAAGATGCCCCAACTGGAAAAGTCAG
CGATTCAATGCCCAAAGATCTCAGTGCCTGAGCCCTTATAAGAATGCCTA
CCATTAAGTAAGTCTACACGCCTGTATATATACTATAGTTAAGTAGTGGA
TTAAGTCTCGCCAAAAGAAACGTTCCTGAATTTGAAAACACAATCCAGTG
ATTAGTCGCGTCTTCCCAAACTCTTCCCAATCGTATATATTTAATTAGAA
TAGTCTCGGCTAAGTACTACTTGTAATTGGATTGTTAAAGTTTGTCAACA
AACTTATTGGCCGCAATAAATAATTTAATTTGCAAAAAAAAAAAAAAAAA
A

LD47926.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:20:35
Subject Length Description Subject Range Query Range Score Percent Strand
lmd-RB 3438 lmd-RB 219..3402 1..3184 15920 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:52:22
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 18848329..18850089 1763..1 8450 98.8 Minus
chr3R 27901430 chr3R 18844629..18845887 3183..1925 6130 99.1 Minus
chr3R 27901430 chr3R 18847159..18847321 1925..1763 815 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:45:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:52:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23024937..23026699 1763..1 8815 100 Minus
3R 32079331 3R 23021221..23022480 3184..1925 6300 100 Minus
3R 32079331 3R 23023760..23023922 1925..1763 815 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:59:18
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 22765768..22767530 1763..1 8815 100 Minus
3R 31820162 3R 22762052..22763311 3184..1925 6300 100 Minus
3R 31820162 3R 22764591..22764753 1925..1763 815 100 Minus
Blast to na_te.dros performed 2019-03-16 01:52:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6758..6906 2404..2559 232 65 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6526..6847 2226..2554 214 58.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2563 2430..2702 143 55.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2408 2447..2560 142 63.2 Plus

LD47926.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:53:14 Download gff for LD47926.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 18844629..18845886 1926..3183 99 <- Minus
chr3R 18847159..18847320 1764..1925 100 <- Minus
chr3R 18848329..18850089 1..1763 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:32:22 Download gff for LD47926.complete
Subject Subject Range Query Range Percent Splice Strand
lmd-RB 1..2601 249..2849 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:50:42 Download gff for LD47926.complete
Subject Subject Range Query Range Percent Splice Strand
lmd-RB 1..2601 249..2849 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:10:06 Download gff for LD47926.complete
Subject Subject Range Query Range Percent Splice Strand
lmd-RB 1..2601 249..2849 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:41:52 Download gff for LD47926.complete
Subject Subject Range Query Range Percent Splice Strand
lmd-RB 1..2601 249..2849 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:43:54 Download gff for LD47926.complete
Subject Subject Range Query Range Percent Splice Strand
lmd-RB 1..2601 249..2849 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:03:59 Download gff for LD47926.complete
Subject Subject Range Query Range Percent Splice Strand
lmd-RB 15..3197 1..3183 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:50:42 Download gff for LD47926.complete
Subject Subject Range Query Range Percent Splice Strand
lmd-RB 15..3197 1..3183 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:10:06 Download gff for LD47926.complete
Subject Subject Range Query Range Percent Splice Strand
lmd-RB 15..3197 1..3183 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:41:52 Download gff for LD47926.complete
Subject Subject Range Query Range Percent Splice Strand
lmd-RB 15..3197 1..3183 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:43:54 Download gff for LD47926.complete
Subject Subject Range Query Range Percent Splice Strand
lmd-RB 15..3197 1..3183 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:53:14 Download gff for LD47926.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23024937..23026699 1..1763 100   Minus
3R 23021222..23022479 1926..3183 100 <- Minus
3R 23023760..23023921 1764..1925 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:53:14 Download gff for LD47926.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23024937..23026699 1..1763 100   Minus
3R 23021222..23022479 1926..3183 100 <- Minus
3R 23023760..23023921 1764..1925 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:53:14 Download gff for LD47926.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23024937..23026699 1..1763 100   Minus
3R 23021222..23022479 1926..3183 100 <- Minus
3R 23023760..23023921 1764..1925 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:10:06 Download gff for LD47926.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18846944..18848201 1926..3183 100 <- Minus
arm_3R 18849482..18849643 1764..1925 100 <- Minus
arm_3R 18850659..18852421 1..1763 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:12:31 Download gff for LD47926.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22762053..22763310 1926..3183 100 <- Minus
3R 22764591..22764752 1764..1925 100 <- Minus
3R 22765768..22767530 1..1763 100   Minus

LD47926.pep Sequence

Translation from 248 to 2848

> LD47926.pep
MSSSLKTSQSGGMYVKTSSISGISSISGKEAASCYGGFMSPPLSANITAN
NGEREMFRVPGAKVETNESYACGELQFPDFSHLCFAAETPNSVFSDCHNY
AGQDQQQDSDQDDIVCAAAENTGMPYQQGQYTQLNREDIFRFEPEDIARL
TGESELPGMLQHPQTPYTPYTPYTPYTPCSAQNSQYAVQPANDSINLDID
YFNYDEINCQSKNQSPCSSPHLDAWLNFNLGEISAAASSSAASPKLGNVF
EEQVKEEASPAKLPSMNSTFGTPKCIPMCASNYEDYANLYQQGSGYSTEN
YHNNMAQVVEKPNREHKAIWTIDELDELMLGEQQQFLQHHLQQQHLQEQQ
EQLHQPHGQEQQTQNCKDDLVNYLSDEFIKAEEFRSLDSDDDENYNEEED
DLDNDVFAPPAESDPKPDSTCCDPEAEPENEVIPLICRWTGCDEEFPHQQ
AFVEHIEKCHVDVRKGEDFSCFWLDCPRRYKPFNARYKLLIHMRVHSGEK
PNKCPFPGCNKAFSRLENLKIHQRSHTGERPYGCQYKGCLKAFSNSSDRA
KHQRTHYDTKPYACQLPGCTKRYTDPSSLRKHVKNHALRNANGQLRRKSA
GGASVPPSGPKKAAKTRRHSESALVQRGVGAGVGVAVPSAPGDQRQHRSN
SCSEALLLQQHQQQQQQQQQQQKQHQPENERTTDRSNCGTGVAANNNSMN
FNELSNCIVIIEHNQSGGPAGPATLATATATTTATATYGNGNMAPAPETE
VLSVCSGGGSSNSNSNNNRYNANINQLSELEQLLTTAKPTGTPAASANGI
SLANNNGRANGDSKCHLSEFVSFEYVTKYLTDVYEPQCKSPQPPANFHLQ
PEFDNSFDMLDFPQFI*

LD47926.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 07:01:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18275-PA 823 GF18275-PA 1..823 1..866 2515 65 Plus
Dana\GF19046-PA 1357 GF19046-PA 404..596 392..584 532 55.3 Plus
Dana\GF18915-PA 633 GF18915-PA 247..392 442..587 437 51.4 Plus
Dana\GF12930-PA 388 GF12930-PA 129..278 435..585 435 52.6 Plus
Dana\GF25133-PA 1011 GF25133-PA 382..535 437..601 260 37.6 Plus
Dana\GF25133-PA 1011 GF25133-PA 406..521 431..556 228 38.9 Plus
Dana\GF25133-PA 1011 GF25133-PA 350..462 469..587 209 37.8 Plus
Dana\GF25133-PA 1011 GF25133-PA 351..446 503..598 172 33.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 07:01:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12470-PA 838 GG12470-PA 1..838 1..866 3697 86.2 Plus
Dere\GG16466-PA 1406 GG16466-PA 441..601 423..584 531 60.7 Plus
Dere\GG20347-PA 382 GG20347-PA 126..275 435..585 437 53.3 Plus
Dere\GG12590-PA 612 GG12590-PA 225..379 432..587 436 50 Plus
Dere\GG16477-PA 603 GG16477-PA 414..571 390..586 236 32.5 Plus
Dere\GG16477-PA 603 GG16477-PA 452..544 489..587 222 44.4 Plus
Dere\GG16477-PA 603 GG16477-PA 435..516 500..587 175 40.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 07:01:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18235-PA 563 GH18235-PA 29..554 34..559 1543 58 Plus
Dgri\GH23992-PA 1478 GH23992-PA 485..645 423..584 533 60.7 Plus
Dgri\GH20305-PA 393 GH20305-PA 125..274 435..585 436 53.3 Plus
Dgri\GH23039-PA 669 GH23039-PA 277..422 442..587 436 51.4 Plus
Dgri\GH12994-PA 179 GH12994-PA 1..60 526..585 236 70 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:22
Subject Length Description Subject Range Query Range Score Percent Strand
lmd-PB 866 CG4677-PB 1..866 1..866 4680 100 Plus
lmd-PC 365 CG4677-PC 5..365 506..866 1924 100 Plus
ci-PB 1279 CG2125-PB 262..482 352..584 524 47.7 Plus
ci-PA 1397 CG2125-PA 380..600 352..584 524 47.7 Plus
opa-PA 609 CG1133-PA 231..491 442..681 500 40.5 Plus
sug-PA 384 CG3850-PA 53..276 333..584 463 39.5 Plus
sug-PB 322 CG3850-PB 50..214 418..584 453 50.6 Plus
rn-PC 692 CG42277-PC 259..508 431..681 282 30.7 Plus
rn-PF 927 CG42277-PF 494..743 431..681 282 30.7 Plus
rn-PE 946 CG42277-PE 513..762 431..681 282 30.7 Plus
rn-PG 952 CG42277-PG 513..762 431..681 282 30.7 Plus
rn-PC 692 CG42277-PC 255..505 461..681 270 29.7 Plus
rn-PF 927 CG42277-PF 490..740 461..681 270 29.7 Plus
rn-PE 946 CG42277-PE 509..759 461..681 270 29.7 Plus
rn-PG 952 CG42277-PG 509..759 461..681 270 29.7 Plus
MTF-1-PA 791 CG3743-PA 146..285 442..586 259 40.4 Plus
MTF-1-PF 822 CG3743-PF 361..500 442..586 259 40.4 Plus
MTF-1-PC 1006 CG3743-PC 361..500 442..586 259 40.4 Plus
sqz-PA 535 CG5557-PA 63..476 329..723 255 26.6 Plus
gl-PA 604 CG7672-PA 414..595 390..609 255 32.6 Plus
gl-PC 679 CG7672-PC 414..595 390..609 255 32.6 Plus
CG12299-PA 736 CG12299-PA 372..618 442..681 252 29.8 Plus
jim-PI 792 CG11352-PI 493..695 433..698 251 28.7 Plus
jim-PH 820 CG11352-PH 521..723 433..698 251 28.7 Plus
jim-PD 820 CG11352-PD 521..723 433..698 251 28.7 Plus
jim-PC 820 CG11352-PC 521..723 433..698 251 28.7 Plus
jim-PF 938 CG11352-PF 521..723 433..698 251 28.7 Plus
Blimp-1-PF 1203 CG5249-PF 912..1201 481..712 245 29.5 Plus
Blimp-1-PE 1203 CG5249-PE 912..1201 481..712 245 29.5 Plus
Blimp-1-PD 1203 CG5249-PD 912..1201 481..712 245 29.5 Plus
Blimp-1-PA 1203 CG5249-PA 912..1201 481..712 245 29.5 Plus
Blimp-1-PC 1216 CG5249-PC 925..1214 481..712 245 29.5 Plus
Blimp-1-PB 1216 CG5249-PB 925..1214 481..712 245 29.5 Plus
Sp1-PB 520 CG1343-PB 182..451 491..680 243 28.8 Plus
Sp1-PD 715 CG1343-PD 377..646 491..680 243 28.8 Plus
Sp1-PE 720 CG1343-PE 382..651 491..680 243 28.8 Plus
Sp1-PF 726 CG1343-PF 377..646 491..680 243 28.8 Plus
Kr-h1-PA 791 CG45074-PA 278..432 442..609 242 32.1 Plus
Kr-h1-PB 845 CG45074-PB 332..486 442..609 242 32.1 Plus
jim-PE 825 CG11352-PE 525..728 433..698 239 28.6 Plus
jim-PG 794 CG11352-PG 493..697 433..698 238 28.2 Plus
gl-PB 557 CG7672-PB 452..544 489..587 229 44.4 Plus
CG32772-PE 520 CG32772-PE 80..268 342..587 228 26.4 Plus
CG32772-PC 520 CG32772-PC 80..268 342..587 228 26.4 Plus
MTF-1-PA 791 CG3743-PA 170..285 431..556 226 38.1 Plus
MTF-1-PF 822 CG3743-PF 385..500 431..556 226 38.1 Plus
MTF-1-PC 1006 CG3743-PC 385..500 431..556 226 38.1 Plus
CG14710-PB 415 CG14710-PB 103..375 296..592 226 26.6 Plus
dwg-PA 592 CG2711-PA 119..444 291..591 226 25.7 Plus
Cf2-PA 510 CG11924-PA 224..510 299..588 225 27 Plus
cbt-PC 347 CG4427-PC 183..331 503..660 223 32.9 Plus
cbt-PB 347 CG4427-PB 183..331 503..660 223 32.9 Plus
cbt-PA 428 CG4427-PA 264..412 503..660 223 32.9 Plus
CG15269-PA 587 CG15269-PA 384..489 475..586 223 41.1 Plus
Kr-h1-PA 791 CG45074-PA 72..353 332..586 219 26.9 Plus
Kr-h1-PB 845 CG45074-PB 126..407 332..586 219 26.9 Plus
CG17385-PB 278 CG17385-PB 51..253 442..675 219 29.9 Plus
CG17385-PA 278 CG17385-PA 51..253 442..675 219 29.9 Plus
CG15269-PA 587 CG15269-PA 388..533 442..600 219 32.7 Plus
MTF-1-PA 791 CG3743-PA 1..341 341..688 214 22.7 Plus
gl-PB 557 CG7672-PB 414..553 390..566 214 33.3 Plus
CG4854-PA 319 CG4854-PA 187..284 483..586 214 40.4 Plus
CG8319-PA 383 CG8319-PA 11..368 242..582 211 24.9 Plus
MTF-1-PF 822 CG3743-PF 329..556 469..688 208 25.1 Plus
MTF-1-PC 1006 CG3743-PC 329..556 469..688 208 25.1 Plus
jim-PG 794 CG11352-PG 485..669 460..679 208 30 Plus
jim-PE 825 CG11352-PE 517..700 460..679 206 30 Plus
CG12299-PA 736 CG12299-PA 257..389 440..586 184 31.8 Plus
CG4854-PA 319 CG4854-PA 72..312 335..586 183 26.5 Plus
CG8319-PA 383 CG8319-PA 210..345 442..587 183 32 Plus
gl-PB 557 CG7672-PB 435..516 500..587 181 40.9 Plus
Blimp-1-PF 1203 CG5249-PF 844..956 476..587 172 32.8 Plus
Blimp-1-PE 1203 CG5249-PE 844..956 476..587 172 32.8 Plus
Blimp-1-PD 1203 CG5249-PD 844..956 476..587 172 32.8 Plus
Blimp-1-PA 1203 CG5249-PA 844..956 476..587 172 32.8 Plus
Blimp-1-PC 1216 CG5249-PC 857..969 476..587 172 32.8 Plus
Blimp-1-PB 1216 CG5249-PB 857..969 476..587 172 32.8 Plus
jim-PH 820 CG11352-PH 318..435 455..586 171 34.1 Plus
jim-PD 820 CG11352-PD 318..435 455..586 171 34.1 Plus
jim-PC 820 CG11352-PC 318..435 455..586 171 34.1 Plus
jim-PF 938 CG11352-PF 318..435 455..586 171 34.1 Plus
jim-PE 825 CG11352-PE 318..435 455..586 171 34.1 Plus
cbt-PC 347 CG4427-PC 182..268 469..560 167 38 Plus
cbt-PB 347 CG4427-PB 182..268 469..560 167 38 Plus
cbt-PA 428 CG4427-PA 263..349 469..560 167 38 Plus
jim-PH 820 CG11352-PH 334..441 442..562 166 32.2 Plus
jim-PD 820 CG11352-PD 334..441 442..562 166 32.2 Plus
jim-PC 820 CG11352-PC 334..441 442..562 166 32.2 Plus
jim-PF 938 CG11352-PF 334..441 442..562 166 32.2 Plus
jim-PE 825 CG11352-PE 334..441 442..562 166 32.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 07:01:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10767-PA 780 GI10767-PA 401..780 422..866 1137 55.5 Plus
Dmoj\GI14119-PA 1463 GI14119-PA 446..606 423..584 539 60.7 Plus
Dmoj\GI19975-PA 381 GI19975-PA 125..274 435..585 438 53.3 Plus
Dmoj\GI10245-PA 653 GI10245-PA 265..514 442..667 374 38.7 Plus
Dmoj\GI16598-PA 994 GI16598-PA 356..495 437..586 250 38.7 Plus
Dmoj\GI16598-PA 994 GI16598-PA 380..495 431..556 223 38.1 Plus
Dmoj\GI16598-PA 994 GI16598-PA 324..465 469..586 199 32.4 Plus
Dmoj\GI16598-PA 994 GI16598-PA 325..420 503..598 174 33.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 07:01:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27360-PA 660 GL27360-PA 22..660 244..866 1772 59 Plus
Dper\GL18388-PA 1448 GL18388-PA 454..614 423..584 534 60.1 Plus
Dper\GL17162-PA 382 GL17162-PA 124..273 435..585 433 52.6 Plus
Dper\GL21621-PA 645 GL21621-PA 257..506 442..667 376 38.7 Plus
Dper\GL27359-PA 128 GL27359-PA 27..124 13..108 268 60.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 07:01:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18349-PA 919 GA18349-PA 1..919 1..866 2414 57.9 Plus
Dpse\GA27838-PA 1448 GA27838-PA 454..614 423..584 534 60.1 Plus
Dpse\GA17730-PA 382 GA17730-PA 124..273 435..585 433 52.6 Plus
Dpse\GA10924-PA 645 GA10924-PA 257..506 442..667 376 38.7 Plus
Dpse\GA17655-PA 1046 GA17655-PA 397..551 437..599 250 37 Plus
Dpse\GA17655-PA 1046 GA17655-PA 421..536 431..556 230 38.9 Plus
Dpse\GA17655-PA 1046 GA17655-PA 365..506 469..586 210 33.1 Plus
Dpse\GA17655-PA 1046 GA17655-PA 366..461 503..598 166 32.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 07:01:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23601-PA 834 GM23601-PA 1..834 1..866 4325 93.2 Plus
Dsec\GM23237-PA 1404 GM23237-PA 445..605 423..584 533 60.7 Plus
Dsec\GM21434-PA 377 GM21434-PA 121..270 435..585 439 53.3 Plus
Dsec\GM10780-PA 492 GM10780-PA 233..378 442..587 435 51.4 Plus
Dsec\GM25148-PA 1002 GM25148-PA 360..510 442..598 254 39.2 Plus
Dsec\GM25148-PA 1002 GM25148-PA 384..499 431..556 224 38.1 Plus
Dsec\GM25148-PA 1002 GM25148-PA 328..439 469..586 203 37.3 Plus
Dsec\GM25148-PA 1002 GM25148-PA 329..424 503..598 171 33.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 07:01:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18414-PA 741 GD18414-PA 1..726 1..761 3774 92.5 Plus
Dsim\ci-PA 1402 GD24828-PA 413..603 392..584 535 54.9 Plus
Dsim\GD10932-PA 377 GD10932-PA 121..270 435..585 437 53.3 Plus
Dsim\GD19752-PA 609 GD19752-PA 224..378 432..587 436 50 Plus
Dsim\GD14182-PA 1004 GD14182-PA 360..510 442..598 254 39.2 Plus
Dsim\GD14182-PA 1004 GD14182-PA 384..499 431..556 224 38.1 Plus
Dsim\GD14182-PA 1004 GD14182-PA 328..439 469..586 203 37.3 Plus
Dsim\GD14182-PA 1004 GD14182-PA 329..424 503..598 171 33.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 07:01:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14367-PA 858 GJ14367-PA 38..858 34..866 2023 52.2 Plus
Dvir\GJ14655-PA 1432 GJ14655-PA 462..609 437..584 523 63.1 Plus
Dvir\GJ21228-PA 397 GJ21228-PA 120..269 435..585 441 53.3 Plus
Dvir\GJ11051-PA 669 GJ11051-PA 272..519 442..667 378 39.4 Plus
Dvir\GJ12850-PA 536 GJ12850-PA 146..285 437..586 250 38.7 Plus
Dvir\GJ12850-PA 536 GJ12850-PA 170..287 431..558 224 37.5 Plus
Dvir\GJ12850-PA 536 GJ12850-PA 114..255 469..586 200 32.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 07:01:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11610-PA 700 GK11610-PA 19..636 34..626 1800 59 Plus
Dwil\GK13666-PA 1507 GK13666-PA 533..693 423..584 532 60.1 Plus
Dwil\GK13239-PA 674 GK13239-PA 278..423 442..587 436 51.4 Plus
Dwil\GK20769-PA 368 GK20769-PA 115..264 435..585 434 52.6 Plus
Dwil\GK22809-PA 239 GK22809-PA 65..215 430..584 227 34.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 07:01:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23994-PA 842 GE23994-PA 1..842 1..866 3534 88.1 Plus
Dyak\ci-PA 1406 GE14531-PA 446..606 423..584 531 60.7 Plus
Dyak\GE12506-PA 375 GE12506-PA 119..268 435..585 440 53.9 Plus
Dyak\GE25438-PA 870 GE25438-PA 350..504 432..587 433 50 Plus
Dyak\GE20840-PA 1005 GE20840-PA 359..509 442..598 253 39.2 Plus
Dyak\GE25438-PA 870 GE25438-PA 221..315 432..527 244 46.9 Plus
Dyak\GE20840-PA 1005 GE20840-PA 383..498 431..556 224 38.1 Plus
Dyak\GE20840-PA 1005 GE20840-PA 327..438 469..586 202 37.3 Plus
Dyak\GE25438-PA 870 GE25438-PA 581..643 525..587 191 54 Plus
Dyak\GE20840-PA 1005 GE20840-PA 328..423 503..598 171 33.3 Plus

LD47926.hyp Sequence

Translation from 248 to 2848

> LD47926.hyp
MSSSLKTSQSGGMYVKTSSISGISSISGKEAASCYGGFMSPPLSANITAN
NGEREMFRVPGAKVETNESYACGELQFPDFSHLCFAAETPNSVFSDCHNY
AGQDQQQDSDQDDIVCAAAENTGMPYQQGQYTQLNREDIFRFEPEDIARL
TGESELPGMLQHPQTPYTPYTPYTPYTPCSAQNSQYAVQPANDSINLDID
YFNYDEINCQSKNQSPCSSPHLDAWLNFNLGEISAAASSSAASPKLGNVF
EEQVKEEASPAKLPSMNSTFGTPKCIPMCASNYEDYANLYQQGSGYSTEN
YHNNMAQVVEKPNREHKAIWTIDELDELMLGEQQQFLQHHLQQQHLQEQQ
EQLHQPHGQEQQTQNCKDDLVNYLSDEFIKAEEFRSLDSDDDENYNEEED
DLDNDVFAPPAESDPKPDSTCCDPEAEPENEVIPLICRWTGCDEEFPHQQ
AFVEHIEKCHVDVRKGEDFSCFWLDCPRRYKPFNARYKLLIHMRVHSGEK
PNKCPFPGCNKAFSRLENLKIHQRSHTGERPYGCQYKGCLKAFSNSSDRA
KHQRTHYDTKPYACQLPGCTKRYTDPSSLRKHVKNHALRNANGQLRRKSA
GGASVPPSGPKKAAKTRRHSESALVQRGVGAGVGVAVPSAPGDQRQHRSN
SCSEALLLQQHQQQQQQQQQQQKQHQPENERTTDRSNCGTGVAANNNSMN
FNELSNCIVIIEHNQSGGPAGPATLATATATTTATATYGNGNMAPAPETE
VLSVCSGGGSSNSNSNNNRYNANINQLSELEQLLTTAKPTGTPAASANGI
SLANNNGRANGDSKCHLSEFVSFEYVTKYLTDVYEPQCKSPQPPANFHLQ
PEFDNSFDMLDFPQFI*

LD47926.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:17:24
Subject Length Description Subject Range Query Range Score Percent Strand
lmd-PB 866 CG4677-PB 1..866 1..866 4680 100 Plus
lmd-PC 365 CG4677-PC 5..365 506..866 1924 100 Plus
ci-PB 1279 CG2125-PB 262..482 352..584 524 47.7 Plus
ci-PA 1397 CG2125-PA 380..600 352..584 524 47.7 Plus
opa-PA 609 CG1133-PA 231..491 442..681 500 40.5 Plus