Clone LD47944 Report

Search the DGRC for LD47944

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:479
Well:44
Vector:pOT2
Associated Gene/TranscriptCG5568-RA
Protein status:LD47944.pep: gold
Preliminary Size:1915
Sequenced Size:1898

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5568 2001-01-01 Release 2 assignment
CG5568 2001-09-19 Blastp of sequenced clone
CG5568 2003-01-01 Sim4 clustering to Release 3
CG5568 2008-04-29 Release 5.5 accounting
CG5568 2008-08-15 Release 5.9 accounting
CG5568 2008-12-18 5.12 accounting

Clone Sequence Records

LD47944.complete Sequence

1898 bp (1898 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058733

> LD47944.complete
CACAGAAGTTAGAGAGATATATAAATTATAAGCCTTCATTTTAATTCTTA
ACGTATTATACAAAATGGGTGAATTGCAAGCGGGAAAATCGCCCTTTAAG
ACAAGAAACACCTTTGATGAAAACTTAAAGATCTGGAGTGGTGGCGAAAA
ACGCAGTTTATTCTCACCAGATTTGTCCATTGGAGAAATTATCTTTCAAC
AAATGGAGCGCAATGCTATGCTCACTGCCCAGATTTCAGTTACAGAAAAC
ACTGAGCTGACCTGGAAAGACATCCAGACAAACGCGATGAAGGTGGCAAG
TTATATGCGTAAACTGGGTCTGGAGCAAGGTGACTTTGTGGGAGTCATTG
GCAGGTTGACCACTCACTTGACTGCTCTGGCCTATGCCTGTTTCTTTAAT
GGAACTCCTTATCATGCCCTACACACCGAATACGAACAATCTGCCATCGA
GAGACTGTTCGGAATAACCAAGCCACGCTTAATCTTCTGTGATGGAGATG
AGTTTGAGAAAGTTCAAGCAGCCACCAAAGGCCTTCAGGTACAAATAGTA
ACCATGCGTAATCACCCGGCAGGAATATTGAGAATTCAGGATATTTTAAC
CACTCCCGTGGAGATGAACTTTCGACCAGTGCGACTGAAAGACGGTACTG
ATCAACTACTGGCCATTCTTAGCTCTTCGGGAACATCCGGCCTTCCAAAG
GCAGTCACCATTAGCAATAGTCACCAGATTATTGGGAGTTTTCTACCCGT
GGATAGCTCGATTATTCAGTATAACCCAAACACTTTGGATTGGGCATCAG
GCATCACGATGACCATCAATGCAGCCGTGTTTAGCTTGACTAGTATAATT
GAAGATTGTGACTTTGATCCTGCCAATTTGTGTGGCCTAATTGAGAAGTA
TCGAATATCGATGGTGTTCGTAAGTTCCTCGCAATTGGCGATGCTGTCCA
ATTGCCCGGAATTCTATGCGGCGGACCTATCATCCGTGAAGTATTTCTTT
TACGGCGGATCAAACTGCTCACTGGAAGTCCAGAACAAAATTCGCAGCCG
TCTAAGCAACGAATGTGTAAATTTCAGTTATACACTAACCGAGTTGAACA
GCCCCGGATGCCTAAACTTCAACTTCGATGAGAAACCCAATTCAGTGGGT
CGTCCGGTTAGAGGCATTCAAATCAAAATAGTCAACGAGCTGGGTGAAGC
ACAAGGACCCAATGTCGTGGGCGAGATATGCTTCAATAATGGTCAGAAAT
GGCCTGGTTACTACAAGAATCCGGAAGAAACGAAGAAGATGCAGGACTCG
GAGAACTGGTTTCACACCGGGGACCTGGGCTACATGGACGAGGATGGATA
TTTGTTCATTATCGATCGCTTGAAGGATATGCTCAAGTATCAGACCATCA
TGTATTACCCCAGCGAGATTGAAAGTGTCATCGCTGAAATGCCAAATGTT
GTGGAAGCTTGTGTCTTTGGCATTTGGGATCCCGTTTATGGAGATAAGGC
AGCCGCTTCAGTGGTCAAGAAACAAGGAACCCAACTAGAGGCCCAGGATG
TTGTGGAGTATGTGAGGAAACGTATACCTGCCAAATTTAAGCAGTTGAAT
GGAGGAGCTTTGATTGTGGATCACATTATTCAGAGTGGCAATAGAAAAGC
AAACAGAGCGGCCACAAAAGCTGAGTTTTTACGAATTATGGAGAAGAATT
AGTTTTGCATATTTAATTATTGTAATGTTTATGTTGTATTTGTATTTTTA
TTGTATTTGTATTTGTATTTGTTGTATTTATCGTAAGCTTTTTAAGAGGT
TCGCCATCTTAGGCATTTTTTCATATTCGCCGAGTAAAATAATACCGAAA
CACATATCGATTACAAAATCGTTAATACAAAAAAAAAAAAAAAAAAAA

LD47944.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:16:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG5568-RA 1941 CG5568-RA 49..1927 1..1879 9395 100 Plus
CG18586.a 2020 CG18586.a 1346..1893 1115..1662 1270 82.1 Plus
CG18586-RB 2047 CG18586-RB 1373..1920 1115..1662 1270 82.1 Plus
CG18586.a 2020 CG18586.a 1..209 1671..1879 1045 100 Plus
CG18586-RB 2047 CG18586-RB 1..209 1671..1879 1045 100 Plus
CG18586.a 2020 CG18586.a 685..965 454..734 415 76.5 Plus
CG18586-RB 2047 CG18586-RB 712..992 454..734 415 76.5 Plus
CG18586.a 2020 CG18586.a 1238..1305 1007..1074 145 80.8 Plus
CG18586-RB 2047 CG18586-RB 1265..1332 1007..1074 145 80.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:13:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 5864886..5866022 745..1878 5500 99.1 Plus
chr3L 24539361 chr3L 5864321..5864834 231..744 2570 100 Plus
chr3L 24539361 chr3L 5867020..5867843 839..1662 1345 77.5 Plus
chr3L 24539361 chr3L 5864035..5864266 1..232 1115 98.7 Plus
chr3L 24539361 chr3L 5866422..5866863 293..734 485 74 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:45:18 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:12:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 5872385..5873519 745..1879 5675 100 Plus
3L 28110227 3L 5871820..5872333 231..744 2570 100 Plus
3L 28110227 3L 5874516..5875339 839..1662 1375 77.8 Plus
3L 28110227 3L 5871534..5871765 1..232 1160 100 Plus
3L 28110227 3L 5873918..5874359 293..734 470 73.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:40:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 5865485..5866619 745..1879 5675 100 Plus
3L 28103327 3L 5864920..5865433 231..744 2570 100 Plus
3L 28103327 3L 5867892..5868439 1115..1662 1270 82.1 Plus
3L 28103327 3L 5864634..5864865 1..232 1160 100 Plus
3L 28103327 3L 5867179..5867459 454..734 415 76.5 Plus
3L 28103327 3L 5867784..5867851 1007..1074 145 80.8 Plus
Blast to na_te.dros performed on 2019-03-16 11:12:59 has no hits.

LD47944.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:13:48 Download gff for LD47944.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 5864035..5864266 1..232 98 -> Plus
chr3L 5864323..5864834 233..744 100 -> Plus
chr3L 5864886..5865857 745..1716 99 == Plus
chr3L 5865926..5866022 1782..1878 96   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:32:24 Download gff for LD47944.complete
Subject Subject Range Query Range Percent Splice Strand
CG5568-RA 1..1638 65..1702 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:58:37 Download gff for LD47944.complete
Subject Subject Range Query Range Percent Splice Strand
CG5568-RA 1..1638 65..1702 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 13:05:02 Download gff for LD47944.complete
Subject Subject Range Query Range Percent Splice Strand
CG5568-RA 1..1638 65..1702 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:28:32 Download gff for LD47944.complete
Subject Subject Range Query Range Percent Splice Strand
CG5568-RA 1..1638 65..1702 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:30:08 Download gff for LD47944.complete
Subject Subject Range Query Range Percent Splice Strand
CG5568-RA 1..1638 65..1702 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:45:29 Download gff for LD47944.complete
Subject Subject Range Query Range Percent Splice Strand
CG5568-RA 33..1910 1..1878 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:58:37 Download gff for LD47944.complete
Subject Subject Range Query Range Percent Splice Strand
CG5568-RA 33..1910 1..1878 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:05:02 Download gff for LD47944.complete
Subject Subject Range Query Range Percent Splice Strand
CG5568-RA 34..1911 1..1878 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:28:32 Download gff for LD47944.complete
Subject Subject Range Query Range Percent Splice Strand
CG5568-RA 33..1910 1..1878 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:30:08 Download gff for LD47944.complete
Subject Subject Range Query Range Percent Splice Strand
CG5568-RA 34..1911 1..1878 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:13:48 Download gff for LD47944.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5871822..5872333 233..744 100 -> Plus
3L 5871534..5871765 1..232 100 -> Plus
3L 5872385..5873518 745..1878 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:13:48 Download gff for LD47944.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5871822..5872333 233..744 100 -> Plus
3L 5871534..5871765 1..232 100 -> Plus
3L 5872385..5873518 745..1878 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:13:48 Download gff for LD47944.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5871822..5872333 233..744 100 -> Plus
3L 5871534..5871765 1..232 100 -> Plus
3L 5872385..5873518 745..1878 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:05:02 Download gff for LD47944.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 5864634..5864865 1..232 100 -> Plus
arm_3L 5864922..5865433 233..744 100 -> Plus
arm_3L 5865485..5866618 745..1878 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:05:16 Download gff for LD47944.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5864634..5864865 1..232 100 -> Plus
3L 5864922..5865433 233..744 100 -> Plus
3L 5865485..5866618 745..1878 100   Plus

LD47944.pep Sequence

Translation from 64 to 1701

> LD47944.pep
MGELQAGKSPFKTRNTFDENLKIWSGGEKRSLFSPDLSIGEIIFQQMERN
AMLTAQISVTENTELTWKDIQTNAMKVASYMRKLGLEQGDFVGVIGRLTT
HLTALAYACFFNGTPYHALHTEYEQSAIERLFGITKPRLIFCDGDEFEKV
QAATKGLQVQIVTMRNHPAGILRIQDILTTPVEMNFRPVRLKDGTDQLLA
ILSSSGTSGLPKAVTISNSHQIIGSFLPVDSSIIQYNPNTLDWASGITMT
INAAVFSLTSIIEDCDFDPANLCGLIEKYRISMVFVSSSQLAMLSNCPEF
YAADLSSVKYFFYGGSNCSLEVQNKIRSRLSNECVNFSYTLTELNSPGCL
NFNFDEKPNSVGRPVRGIQIKIVNELGEAQGPNVVGEICFNNGQKWPGYY
KNPEETKKMQDSENWFHTGDLGYMDEDGYLFIIDRLKDMLKYQTIMYYPS
EIESVIAEMPNVVEACVFGIWDPVYGDKAAASVVKKQGTQLEAQDVVEYV
RKRIPAKFKQLNGGALIVDHIIQSGNRKANRAATKAEFLRIMEKN*

LD47944.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 10:17:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23997-PA 562 GF23997-PA 22..555 8..541 1718 56.7 Plus
Dana\GF17616-PA 537 GF17616-PA 2..533 10..541 1678 55.8 Plus
Dana\GF17359-PA 537 GF17359-PA 2..537 10..545 1610 53.9 Plus
Dana\GF17615-PA 540 GF17615-PA 12..537 17..540 1148 40.9 Plus
Dana\GF17617-PA 539 GF17617-PA 8..528 17..539 1030 38.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:17:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23494-PA 538 GG23494-PA 2..531 10..539 1712 57.4 Plus
Dere\GG15852-PA 537 GG15852-PA 2..537 10..545 1641 55 Plus
Dere\GG23483-PA 542 GG23483-PA 11..537 16..540 1175 41.4 Plus
Dere\GG22583-PA 535 GG22583-PA 7..535 16..544 1018 39 Plus
Dere\GG23505-PA 539 GG23505-PA 3..528 12..539 1001 39.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 10:17:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15631-PA 537 GH15631-PA 2..537 10..545 1638 54.7 Plus
Dgri\GH15741-PA 538 GH15741-PA 2..537 10..545 1602 53.5 Plus
Dgri\GH25241-PA 538 GH25241-PA 2..537 10..545 1599 53.7 Plus
Dgri\GH15521-PA 478 GH15521-PA 2..464 10..501 1390 51.4 Plus
Dgri\GH15410-PA 546 GH15410-PA 11..537 16..540 1219 44.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:21:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG5568-PA 545 CG5568-PA 1..545 1..545 2836 100 Plus
CG18586-PB 545 CG18586-PB 1..545 1..545 2016 69.7 Plus
CG18586-PC 536 CG18586-PC 1..536 1..545 1982 69 Plus
CG11407-PA 538 CG11407-PA 2..531 10..539 1636 56.4 Plus
CG6300-PA 537 CG6300-PA 2..537 10..545 1575 53.9 Plus
CG11659-PA 546 CG11659-PA 2..536 10..544 1569 54.2 Plus
CG11391-PA 542 CG11391-PA 11..537 16..540 1143 41.9 Plus
CG8834-PA 535 CG8834-PA 7..530 16..541 1021 40 Plus
CG11453-PA 539 CG11453-PA 3..528 12..539 999 38.9 Plus
CG4830-PA 534 CG4830-PA 7..534 16..545 920 36.7 Plus
CG4563-PA 537 CG4563-PA 11..529 17..538 849 34.3 Plus
CG17999-PA 545 CG17999-PA 7..530 17..531 621 28.8 Plus
CG9993-PA 543 CG9993-PA 6..529 17..531 616 30.6 Plus
CG6178-PA 544 CG6178-PA 26..530 38..531 433 25.9 Plus
pdgy-PC 597 CG9009-PC 73..595 35..538 351 23.2 Plus
pdgy-PB 597 CG9009-PB 73..595 35..538 351 23.2 Plus
pdgy-PD 597 CG9009-PD 73..595 35..538 351 23.2 Plus
pdgy-PA 597 CG9009-PA 73..595 35..538 351 23.2 Plus
CG12512-PA 593 CG12512-PA 49..553 43..509 259 24.1 Plus
AcCoAS-PD 670 CG9390-PD 116..608 65..504 185 22.2 Plus
AcCoAS-PA 670 CG9390-PA 116..608 65..504 185 22.2 Plus
CG3961-PD 654 CG3961-PD 415..547 339..469 183 36.6 Plus
CG3961-PE 666 CG3961-PE 427..559 339..469 183 36.6 Plus
CG3961-PC 704 CG3961-PC 465..597 339..469 183 36.6 Plus
CG3961-PA 704 CG3961-PA 465..597 339..469 183 36.6 Plus
AcCoAS-PB 524 CG9390-PB 134..462 199..504 176 25.1 Plus
Acsl-PC 707 CG8732-PC 433..601 308..469 168 31.2 Plus
Acsl-PF 707 CG8732-PF 433..601 308..469 168 31.2 Plus
Acsl-PI 707 CG8732-PI 433..601 308..469 168 31.2 Plus
Acsl-PG 707 CG8732-PG 433..601 308..469 168 31.2 Plus
Acsl-PB 715 CG8732-PB 441..609 308..469 168 31.2 Plus
Acsl-PH 715 CG8732-PH 441..609 308..469 168 31.2 Plus
Acsl-PA 715 CG8732-PA 441..609 308..469 168 31.2 Plus
Acsl-PE 715 CG8732-PE 441..609 308..469 168 31.2 Plus
Acsl-PD 717 CG8732-PD 443..611 308..469 168 31.2 Plus
Acsl-PJ 728 CG8732-PJ 454..622 308..469 168 31.2 Plus
CG6432-PB 674 CG6432-PB 266..567 199..476 167 23.9 Plus
CG6432-PA 674 CG6432-PA 266..567 199..476 167 23.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 10:18:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22425-PA 537 GI22425-PA 2..537 10..545 1654 54.7 Plus
Dmoj\GI22426-PA 536 GI22426-PA 3..536 11..545 1596 55.3 Plus
Dmoj\GI17143-PA 537 GI17143-PA 2..532 10..539 1440 49.3 Plus
Dmoj\GI22424-PA 547 GI22424-PA 11..541 16..544 1205 43.3 Plus
Dmoj\GI22427-PA 540 GI22427-PA 9..529 17..539 1004 38.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 10:18:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21628-PA 546 GL21628-PA 2..538 10..544 1852 61.6 Plus
Dper\GL22206-PA 548 GL22206-PA 2..540 10..545 1835 60.7 Plus
Dper\GL22204-PA 538 GL22204-PA 2..538 10..545 1795 60.2 Plus
Dper\GL22127-PA 545 GL22127-PA 2..537 10..544 1708 57.9 Plus
Dper\GL11948-PA 539 GL11948-PA 2..539 10..545 1663 54.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 10:18:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26350-PA 546 GA26350-PA 2..538 10..544 1844 61.1 Plus
Dpse\GA27415-PA 548 GA27415-PA 9..540 17..545 1842 61.8 Plus
Dpse\GA27413-PA 538 GA27413-PA 2..536 10..543 1769 59.5 Plus
Dpse\GA27384-PA 545 GA27384-PA 2..537 10..544 1720 58.3 Plus
Dpse\GA10983-PA 539 GA10983-PA 2..538 10..544 1713 57.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:18:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20875-PA 538 GM20875-PA 2..531 10..539 1692 56.6 Plus
Dsec\GM26895-PA 537 GM26895-PA 2..536 10..544 1601 53.8 Plus
Dsec\GM26862-PA 383 GM26862-PA 1..376 164..539 1194 55.6 Plus
Dsec\GM13136-PA 375 GM13136-PA 2..374 10..382 1117 54.2 Plus
Dsec\GM26863-PA 537 GM26863-PA 3..532 12..540 1083 40.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:18:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13904-PA 545 GD13904-PA 1..545 1..545 2833 96.1 Plus
Dsim\GD13906-PA 542 GD13906-PA 13..536 16..539 2102 72.7 Plus
Dsim\GD19313-PA 538 GD19313-PA 2..531 10..539 1686 56.4 Plus
Dsim\GD20102-PA 529 GD20102-PA 2..529 10..545 1555 52.8 Plus
Dsim\GD25843-PA 535 GD25843-PA 7..528 16..539 1039 40.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 10:18:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10987-PA 537 GJ10987-PA 3..537 11..545 1641 54.8 Plus
Dvir\GJ10986-PA 537 GJ10986-PA 3..537 11..545 1634 54.2 Plus
Dvir\GJ10984-PA 537 GJ10984-PA 3..537 11..545 1610 53.6 Plus
Dvir\GJ10985-PA 536 GJ10985-PA 3..536 11..544 1606 53.7 Plus
Dvir\GJ10795-PA 537 GJ10795-PA 5..537 13..545 1568 52 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 10:18:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22354-PA 537 GK22354-PA 3..537 11..545 1599 53.6 Plus
Dwil\GK22353-PA 533 GK22353-PA 2..532 10..540 1594 53.5 Plus
Dwil\GK15543-PA 547 GK15543-PA 1..494 47..540 1482 54.5 Plus
Dwil\GK15191-PA 537 GK15191-PA 8..537 17..545 1312 46.6 Plus
Dwil\GK22352-PA 552 GK22352-PA 11..540 16..539 1186 43.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:18:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21515-PA 547 GE21515-PA 1..545 1..545 2709 91.2 Plus
Dyak\GE21516-PA 534 GE21516-PA 6..534 17..545 2045 71.3 Plus
Dyak\GE25624-PA 538 GE25624-PA 2..531 10..539 1717 57.2 Plus
Dyak\GE25114-PA 538 GE25114-PA 7..536 15..544 1609 54.2 Plus
Dyak\GE25623-PA 552 GE25623-PA 12..537 17..540 1173 41.9 Plus

LD47944.hyp Sequence

Translation from 64 to 1701

> LD47944.hyp
MGELQAGKSPFKTRNTFDENLKIWSGGEKRSLFSPDLSIGEIIFQQMERN
AMLTAQISVTENTELTWKDIQTNAMKVASYMRKLGLEQGDFVGVIGRLTT
HLTALAYACFFNGTPYHALHTEYEQSAIERLFGITKPRLIFCDGDEFEKV
QAATKGLQVQIVTMRNHPAGILRIQDILTTPVEMNFRPVRLKDGTDQLLA
ILSSSGTSGLPKAVTISNSHQIIGSFLPVDSSIIQYNPNTLDWASGITMT
INAAVFSLTSIIEDCDFDPANLCGLIEKYRISMVFVSSSQLAMLSNCPEF
YAADLSSVKYFFYGGSNCSLEVQNKIRSRLSNECVNFSYTLTELNSPGCL
NFNFDEKPNSVGRPVRGIQIKIVNELGEAQGPNVVGEICFNNGQKWPGYY
KNPEETKKMQDSENWFHTGDLGYMDEDGYLFIIDRLKDMLKYQTIMYYPS
EIESVIAEMPNVVEACVFGIWDPVYGDKAAASVVKKQGTQLEAQDVVEYV
RKRIPAKFKQLNGGALIVDHIIQSGNRKANRAATKAEFLRIMEKN*

LD47944.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:14:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG5568-PA 545 CG5568-PA 1..545 1..545 2836 100 Plus
CG18586-PB 545 CG18586-PB 1..545 1..545 2016 69.7 Plus
CG18586-PC 536 CG18586-PC 1..536 1..545 1982 69 Plus
CG11407-PA 538 CG11407-PA 2..531 10..539 1636 56.4 Plus
CG6300-PA 537 CG6300-PA 2..537 10..545 1575 53.9 Plus