Clone LD47995 Report

Search the DGRC for LD47995

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:479
Well:95
Vector:pOT2
Associated Gene/TranscriptCG10444-RA
Protein status:LD47995.pep: gold
Preliminary Size:2644
Sequenced Size:2811

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10444 2001-01-01 Release 2 assignment
CG10444 2002-04-04 Blastp of sequenced clone
CG10444 2003-01-01 Sim4 clustering to Release 3
CG10444 2008-04-29 Release 5.5 accounting
CG10444 2008-08-15 Release 5.9 accounting
CG10444 2008-12-18 5.12 accounting

Clone Sequence Records

LD47995.complete Sequence

2811 bp (2811 high quality bases) assembled on 2002-04-04

GenBank Submission: AY095060

> LD47995.complete
TAGCCTCGGCAAGAACGTTTCTTTTTTGAGCGGAGATTTCGCGAGCACGC
GTCTTGTTTTCCGCCGTTCGCCGTGCACTTGGACGCGCACTTTAGAAAGC
GTTGACTGCGCCAAAGGTCATTGCTGGGCAAGAGAAGCGTCCAATCGCCG
CTGGTGGTGACGCTTGTGGAAAAATCAATTCGGACCAGTGACGGACGTCG
AACTTCCAGTTCTCTGACAAGCGGAATCCAGTCAACAACAACATGCCCGT
GGGAACGTTTGACGCCTGGGATGCGGCCGTGCTGATCACCATCCTGGTCA
TATCGGCTCTGATTGGCATCTACTACCGGTATACAGGCGGCAAGCAAAAG
ACCACACAGGAGTATCTGATGGCGGACCAGAGCATGACCACTTTTCCGGT
CTCCTTCAGCCTGATGGCAAGCTTCATGTCCGCCATCTCACTGATGGGCG
TCTCCAACGAGTCCTACGAATTTGGTACCATCTTCTGTGTGATCAACATT
GCCTACGTGCTGAGTACGCCCATTGCCGCGTACTTCTTCCTTCCTGTTTT
CTACAGGATGCGGACGACCAGTGTGTACGAGTATCTGGAGCGGCGCTTTG
GCCAGGCCACCCGGCTGTCCGCCTCCCTGGCCTTCACCGTGCAAATGGTG
CTTTACATGGGCATTGCACTCTATGCACCAGCGCTCGCTTTAGAAGCTGT
AACCGGCATTCATCGGTCAATGGCCATCGTGGTCATTGGACTGGTGTGCA
CCTTCTATTCGACACTTGGCGGCCTGAAGGCGGTGCTCATCACGGATGTG
TTTCAGTCCTTCCTCATGTTTGCCGCCATCTACGCCGTGATTGCCGTGTC
GGCCATTAAAGCCGGCGGATTCGCGGCCATCTGGGATGTGGCTGTGGAGC
GAGGACGCGTGAACTTCATTGAGTTTTCATTGGATCCCACCGTGAGGCAT
ACTTGGTGGTCTCTGATCATTGGCGGCATGGTCACTTACCTCTCCTTGTA
TGGCGTTAATCAAACGCAAGTACAGCGACTCCTGAGTGTCCGCAATTTGA
AGAGCGCTCAGTCGGCGCTTTGGTGGAACCTGCCCATCCTAGGAATGCTT
AGTTTTAGCACCATTTTCAGTGGACTGTCCATATTCTACTATTATCGAGA
TTGTGACCCTTTGCTAAAGGGACGCATCGACAAGCGGGATCAGATCATGC
CCCTTTTCGCACTGGAGACTATGGGTCAATATCCTGGACTGTGTGGTCTG
TTCGTGTCCGGAATATTCTCCGCCAGTCTTTCCACGATTTCGTCGGCAGT
TACCTCGCTGTCGGCTGTAACACTGGAGGATTACCTGAAGCCCTTGTACA
AGGCGATATTTAAACGGACGCTAATTGACTCCAAGTCCACGATGCCCACC
AAGATTGTGGCGTGCATTTTTGGCCTGCTTTGCATCGGTCTAGCTTTTGT
CGCTGGCTCCATGGGCGGAGTTCTTCAGGCATCGCTTACCATTTTCGGTG
TGGTAGGCGGTCCGCTGCTGGCCATTTTCACACTGGGAGTCTGCACTACA
CGCAGCAACCAAAGAGGCGTGCTGCTTGGCTTCCTCGTTTCCCTGATAGT
TTCCTTCTGGATGGGATTCGGCGGACCCAAACCAAAGCCAGTTACCTTGG
AGTTTAGCACAGCGGGCTGTGAGAATGCCACCGCGGTAATGGCGCGTGCC
ATCGAGCTCAGCTCAAAGAGCAGCGGAGTGGTCATCGAACCCGACTACTT
CTGGTTATATCGAATTTCTTACTTGTGGCTGAGCGTCATCGGCTTTCTTA
TTGCCGTGGTCGTCGGCTATTTCAGCAGCATTGTGCTGGCTCACTGTGGA
AAGGCAGAAAACGCGGAAATCTATTTGGACAAGTCTCGGAAGCAGCTGGA
CTACGATCTCTTCGCACCCATGCTGTCCCGCCGCTGGCGACGCCATAAAG
AAGAACAAGACCAAACTGCCCAGGACGAAACGCTCACCAAACTAACTGAG
CAGTAGTTCCGCCCGGCTTAGATTTAGTGTAGAATATATACATACATATA
AAAGAATTTCCAGAAGGCGTCGGCTATTTGGTTAGTCGTGTTACGGATGT
CGTACCTAAAAGTGCATAACTATGTGACCTTTTTGTATACCTGTGTGAAC
GAAACTGGCATACAGAGCGACCAAAACAGAGTCTTCCATATACACGTAAA
CAACGATAATTAGTAGTTATTAGTCGTGTTGCAAATGTTCACAAGCGCAT
CATTAAGAGGCCTCTTAAGAATAGTCAAATGTTTTTTACAAGAACGTATC
AAAAGTAGGAGTCTACCTCAATGAACTTTTACAGAGGGACAATAATCAAT
TTGGAGCCTAAAAGCGAGTTGGCCGACTACTTTCCCATGTTGAGCATTGG
CAGCCACAATGCCCCACATAAATTATTGATTTAGTAGTACATCTAATTTT
AATGGGATATTTATATTCATACCTCTTAGTTACTCGATATTTGCATACAT
AGATAACATAATAACATTACAATAATACACTACAGTGAGCACCGCCTATA
AATAGTTACTACATGGCTCTTAAAGCATTACATTGCGCCACAGTGTGAAT
TCTGTTTACTTATATACCTCTACTATATGTACACAAATATACTATAGACT
AATTATATACTCGTGTCGTGTCGCAATCAACCATTGAACAATAACTCGGA
GCAGTGAAAGTTATGTGTATTTGTAAAAGCCAAACTGCTGATCATTAAAG
AAATCTGTTCTACAAAATGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAA

LD47995.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:16:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG10444-RA 2828 CG10444-RA 56..2827 1..2772 13860 100 Plus
CG32669-RA 2385 CG32669-RA 477..614 563..700 255 78.9 Plus
CG32669-RA 2385 CG32669-RA 650..740 736..826 200 81.3 Plus
CG32669-RA 2385 CG32669-RA 1158..1260 1244..1346 170 77.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:57:29
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 16158687..16160234 2771..1224 7665 99.7 Minus
chr2R 21145070 chr2R 16160289..16161514 1226..1 6100 99.8 Minus
chrX 22417052 chrX 10735635..10736058 826..403 395 72.9 Minus
chrX 22417052 chrX 10735115..10735398 1346..1063 205 71.5 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:45:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:57:27
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20271652..20273200 2772..1224 7745 100 Minus
2R 25286936 2R 20273255..20274480 1226..1 6130 100 Minus
X 23542271 X 10844342..10844765 826..403 395 72.9 Minus
X 23542271 X 10843822..10844105 1346..1063 205 71.5 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:46:51
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 20272851..20274399 2772..1224 7745 100 Minus
2R 25260384 2R 20274454..20275679 1226..1 6130 100 Minus
X 23527363 X 10852566..10852703 700..563 255 78.9 Minus
X 23527363 X 10852440..10852530 826..736 200 81.3 Minus
X 23527363 X 10851920..10852022 1346..1244 170 77.6 Minus
Blast to na_te.dros performed on 2019-03-15 19:57:28 has no hits.

LD47995.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:58:15 Download gff for LD47995.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 16158687..16160233 1225..2771 99 <- Minus
chr2R 16160291..16161514 1..1224 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:32:31 Download gff for LD47995.complete
Subject Subject Range Query Range Percent Splice Strand
CG10444-RA 1..1764 243..2006 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:15:42 Download gff for LD47995.complete
Subject Subject Range Query Range Percent Splice Strand
CG10444-RA 1..1764 243..2006 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:04:05 Download gff for LD47995.complete
Subject Subject Range Query Range Percent Splice Strand
CG10444-RA 1..1764 243..2006 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:57:22 Download gff for LD47995.complete
Subject Subject Range Query Range Percent Splice Strand
CG10444-RA 1..1764 243..2006 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:11:21 Download gff for LD47995.complete
Subject Subject Range Query Range Percent Splice Strand
CG10444-RA 1..1764 243..2006 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:46:34 Download gff for LD47995.complete
Subject Subject Range Query Range Percent Splice Strand
CG10444-RA 46..2816 1..2771 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:15:42 Download gff for LD47995.complete
Subject Subject Range Query Range Percent Splice Strand
CG10444-RA 46..2816 1..2771 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:04:05 Download gff for LD47995.complete
Subject Subject Range Query Range Percent Splice Strand
CG10444-RA 20..2790 1..2771 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:57:22 Download gff for LD47995.complete
Subject Subject Range Query Range Percent Splice Strand
CG10444-RA 46..2816 1..2771 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:11:21 Download gff for LD47995.complete
Subject Subject Range Query Range Percent Splice Strand
CG10444-RA 20..2790 1..2771 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:58:15 Download gff for LD47995.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20271653..20273199 1225..2771 100 <- Minus
2R 20273257..20274480 1..1224 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:58:15 Download gff for LD47995.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20271653..20273199 1225..2771 100 <- Minus
2R 20273257..20274480 1..1224 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:58:15 Download gff for LD47995.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20271653..20273199 1225..2771 100 <- Minus
2R 20273257..20274480 1..1224 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:04:05 Download gff for LD47995.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16159158..16160704 1225..2771 100 <- Minus
arm_2R 16160762..16161985 1..1224 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:29:52 Download gff for LD47995.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20272852..20274398 1225..2771 100 <- Minus
2R 20274456..20275679 1..1224 100   Minus

LD47995.pep Sequence

Translation from 242 to 2005

> LD47995.pep
MPVGTFDAWDAAVLITILVISALIGIYYRYTGGKQKTTQEYLMADQSMTT
FPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYVLSTPIAAYFFL
PVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALAL
EAVTGIHRSMAIVVIGLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVI
AVSAIKAGGFAAIWDVAVERGRVNFIEFSLDPTVRHTWWSLIIGGMVTYL
SLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYY
YRDCDPLLKGRIDKRDQIMPLFALETMGQYPGLCGLFVSGIFSASLSTIS
SAVTSLSAVTLEDYLKPLYKAIFKRTLIDSKSTMPTKIVACIFGLLCIGL
AFVAGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVS
LIVSFWMGFGGPKPKPVTLEFSTAGCENATAVMARAIELSSKSSGVVIEP
DYFWLYRISYLWLSVIGFLIAVVVGYFSSIVLAHCGKAENAEIYLDKSRK
QLDYDLFAPMLSRRWRRHKEEQDQTAQDETLTKLTEQ*

LD47995.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 02:35:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12676-PA 588 GF12676-PA 1..588 1..586 2535 81.5 Plus
Dana\GF20262-PA 607 GF20262-PA 1..568 3..569 1651 56.9 Plus
Dana\GF24947-PA 691 GF24947-PA 96..622 5..532 855 36 Plus
Dana\GF21148-PA 606 GF21148-PA 17..550 10..522 777 35.9 Plus
Dana\GF15277-PA 598 GF15277-PA 59..588 29..577 751 34.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 02:35:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20873-PA 586 GG20873-PA 1..586 1..587 2963 95.7 Plus
Dere\GG14545-PA 683 GG14545-PA 95..621 5..532 853 35.8 Plus
Dere\GG19647-PA 601 GG19647-PA 12..555 5..532 807 36.2 Plus
Dere\GG17224-PA 587 GG17224-PA 15..586 8..576 758 32.5 Plus
Dere\GG23469-PA 600 GG23469-PA 14..576 6..563 751 32.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 02:35:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22741-PA 591 GH22741-PA 1..585 1..585 2370 77.2 Plus
Dgri\GH11887-PA 603 GH11887-PA 17..555 10..532 854 37.2 Plus
Dgri\GH15293-PA 687 GH15293-PA 99..625 5..532 843 34.5 Plus
Dgri\GH23999-PA 591 GH23999-PA 18..569 10..569 835 33.2 Plus
Dgri\GH19445-PA 1087 GH19445-PA 93..592 6..477 780 36.5 Plus
Dgri\GH19445-PA 1087 GH19445-PA 582..1081 73..579 610 32.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:21:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG10444-PA 587 CG10444-PA 1..587 1..587 2977 100 Plus
CG32669-PA 604 CG32669-PA 1..565 3..569 1754 58.2 Plus
CG9657-PB 601 CG9657-PB 17..585 10..572 885 36.2 Plus
CG9657-PA 601 CG9657-PA 17..585 10..572 885 36.2 Plus
CG5687-PB 683 CG5687-PB 95..621 5..532 884 35.7 Plus
CG5687-PA 683 CG5687-PA 95..621 5..532 884 35.7 Plus
CG6723-PA 587 CG6723-PA 15..537 8..531 826 34.3 Plus
CG42235-PA 695 CG42235-PA 102..652 6..531 821 33.3 Plus
CG42235-PE 691 CG42235-PE 102..688 6..586 819 30.9 Plus
CG31668-PC 590 CG31668-PC 6..566 6..563 813 34.5 Plus
SLC5A11-PA 600 CG8451-PA 14..576 6..563 809 32.2 Plus
CG42235-PB 695 CG42235-PB 102..665 6..545 783 32.5 Plus
CG2187-PB 623 CG2187-PB 24..560 6..526 753 32 Plus
CG2187-PA 623 CG2187-PA 24..560 6..526 753 32 Plus
CG33124-PD 588 CG33124-PD 6..564 6..563 735 31.2 Plus
CG42235-PC 689 CG42235-PC 102..644 6..531 732 32.2 Plus
CG42235-PD 698 CG42235-PD 102..669 6..565 718 30.9 Plus
Smvt-PA 591 CG2191-PA 24..549 6..532 709 32.1 Plus
salt-PC 621 CG2196-PC 25..554 6..520 700 31.4 Plus
salt-PB 622 CG2196-PB 25..473 6..461 696 33.3 Plus
CG31262-PB 579 CG31262-PB 6..557 6..563 690 30.8 Plus
CG31262-PE 579 CG31262-PE 6..557 6..563 690 30.8 Plus
CG7720-PF 681 CG7720-PF 10..568 9..543 637 28.2 Plus
CG7720-PE 681 CG7720-PE 10..568 9..543 637 28.2 Plus
CG7720-PD 681 CG7720-PD 10..568 9..543 637 28.2 Plus
CG7720-PC 681 CG7720-PC 10..568 9..543 637 28.2 Plus
CG7720-PA 681 CG7720-PA 10..568 9..543 637 28.2 Plus
CG7720-PB 681 CG7720-PB 10..568 9..543 637 28.2 Plus
CG7708-PB 614 CG7708-PB 5..434 12..453 168 19.4 Plus
CG7708-PA 614 CG7708-PA 5..434 12..453 168 19.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 02:35:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18525-PA 589 GI18525-PA 1..583 1..585 2426 79.9 Plus
Dmoj\GI15802-PA 1028 GI15802-PA 120..465 131..476 1191 61.8 Plus
Dmoj\GI12003-PA 678 GI12003-PA 90..616 5..532 830 35.6 Plus
Dmoj\GI10060-PA 587 GI10060-PA 15..586 8..576 809 32.5 Plus
Dmoj\GI15441-PA 592 GI15441-PA 9..591 6..583 759 31.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 02:35:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10993-PA 570 GL10993-PA 1..570 1..587 2333 79.7 Plus
Dper\GL24814-PA 678 GL24814-PA 99..639 5..554 832 34.5 Plus
Dper\GL12607-PA 589 GL12607-PA 18..588 10..576 821 32.9 Plus
Dper\GL23435-PA 610 GL23435-PA 10..588 6..585 723 30.7 Plus
Dper\GL23434-PA 585 GL23434-PA 23..577 6..577 702 31.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 02:35:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24561-PA 587 GA24561-PA 1..587 1..587 2414 83 Plus
Dpse\GA17054-PB 604 GA17054-PB 4..568 5..569 1681 57.5 Plus
Dpse\GA19057-PA 698 GA19057-PA 99..659 5..554 876 35.7 Plus
Dpse\GA27570-PA 589 GA27570-PA 18..588 10..576 821 32.9 Plus
Dpse\GA21946-PA 608 GA21946-PA 17..587 10..572 813 35.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 02:35:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19797-PA 587 GM19797-PA 1..587 1..587 3025 98.3 Plus
Dsec\GM13578-PA 261 GM13578-PA 2..261 328..587 1332 98.5 Plus
Dsec\GM14155-PA 683 GM14155-PA 95..621 5..532 855 36 Plus
Dsec\GM17525-PA 601 GM17525-PA 12..555 5..532 810 36.3 Plus
Dsec\GM26101-PA 587 GM26101-PA 15..586 8..576 764 32.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 02:35:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25290-PA 587 GD25290-PA 1..587 1..587 3039 98.6 Plus
Dsim\GD13424-PA 683 GD13424-PA 95..621 5..532 856 36 Plus
Dsim\GD16846-PA 601 GD16846-PA 12..540 5..517 790 36.6 Plus
Dsim\GD16305-PA 621 GD16305-PA 22..581 6..552 729 31.7 Plus
Dsim\GD22434-PA 578 GD22434-PA 14..554 6..563 684 31.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 02:35:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21389-PA 584 GJ21389-PA 1..579 1..586 2438 79.2 Plus
Dvir\GJ23796-PA 590 GJ23796-PA 15..589 8..576 834 32.5 Plus
Dvir\GJ13273-PA 679 GJ13273-PA 91..617 5..532 824 35.6 Plus
Dvir\GJ19210-PA 602 GJ19210-PA 17..555 10..532 812 36.2 Plus
Dvir\GJ17282-PA 591 GJ17282-PA 58..572 29..563 788 33.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 02:35:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15674-PA 601 GK15674-PA 1..591 1..586 2503 81.4 Plus
Dwil\GK12614-PA 694 GK12614-PA 106..635 5..532 860 35.6 Plus
Dwil\GK16152-PA 604 GK16152-PA 17..590 10..572 859 35.7 Plus
Dwil\GK11796-PA 590 GK11796-PA 14..589 6..576 834 33.1 Plus
Dwil\GK12873-PA 623 GK12873-PA 101..601 6..477 779 35.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 02:35:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13812-PA 587 GE13812-PA 1..587 1..587 2872 93.2 Plus
Dyak\GE20899-PA 683 GE20899-PA 95..621 5..532 860 36 Plus
Dyak\GE15721-PA 601 GE15721-PA 17..555 10..532 813 37 Plus
Dyak\GE11144-PA 600 GE11144-PA 14..576 6..563 759 33.1 Plus
Dyak\GE24625-PA 587 GE24625-PA 15..586 8..576 757 32.5 Plus

LD47995.hyp Sequence

Translation from 242 to 2005

> LD47995.hyp
MPVGTFDAWDAAVLITILVISALIGIYYRYTGGKQKTTQEYLMADQSMTT
FPVSFSLMASFMSAISLMGVSNESYEFGTIFCVINIAYVLSTPIAAYFFL
PVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVLYMGIALYAPALAL
EAVTGIHRSMAIVVIGLVCTFYSTLGGLKAVLITDVFQSFLMFAAIYAVI
AVSAIKAGGFAAIWDVAVERGRVNFIEFSLDPTVRHTWWSLIIGGMVTYL
SLYGVNQTQVQRLLSVRNLKSAQSALWWNLPILGMLSFSTIFSGLSIFYY
YRDCDPLLKGRIDKRDQIMPLFALETMGQYPGLCGLFVSGIFSASLSTIS
SAVTSLSAVTLEDYLKPLYKAIFKRTLIDSKSTMPTKIVACIFGLLCIGL
AFVAGSMGGVLQASLTIFGVVGGPLLAIFTLGVCTTRSNQRGVLLGFLVS
LIVSFWMGFGGPKPKPVTLEFSTAGCENATAVMARAIELSSKSSGVVIEP
DYFWLYRISYLWLSVIGFLIAVVVGYFSSIVLAHCGKAENAEIYLDKSRK
QLDYDLFAPMLSRRWRRHKEEQDQTAQDETLTKLTEQ*

LD47995.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:27:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG10444-PA 587 CG10444-PA 1..587 1..587 2977 100 Plus
CG32669-PA 604 CG32669-PA 1..565 3..569 1754 58.2 Plus
CG9657-PB 601 CG9657-PB 17..585 10..572 885 36.2 Plus
CG9657-PA 601 CG9657-PA 17..585 10..572 885 36.2 Plus
CG5687-PB 683 CG5687-PB 95..621 5..532 884 35.7 Plus