BDGP Sequence Production Resources |
Search the DGRC for LD48010
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 480 |
Well: | 10 |
Vector: | pOT2 |
Associated Gene/Transcript | GstZ1-RA |
Protein status: | LD48010.pep: gold |
Preliminary Size: | 1046 |
Sequenced Size: | 906 |
Gene | Date | Evidence |
---|---|---|
CG9362 | 2001-01-01 | Release 2 assignment |
CG9362 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9362 | 2003-05-21 | Blastp of sequenced clone |
CG9362 | 2008-04-29 | Release 5.5 accounting |
CG9362 | 2008-08-15 | Release 5.9 accounting |
CG9362 | 2008-12-18 | 5.12 accounting |
906 bp (906 high quality bases) assembled on 2003-05-21
GenBank Submission: AY061527
> LD48010.complete TAAACCGGTTGTTTTTCTCACTATAAGTTCTGTTACTTAATAGAAGGGTT CTCTTAAAGAATATATATTTACATATATGGCTTCTGCTACCCAATTGACC CACAGAGGTATCCATTTGGCCGGACTGTACAGATCTTCTTGGTCTAAGCC CTTGTTCCGACATTTGGCAACAAAGCCTATACTGTATTCCTATTGGCCTA GTTCGTGTTCTTGGAGAGTTCGCGTTGCGCTGGCAATAAAGAAGATTGAT TATGACATTAAGCCGACTTCTTTGCTAAAAACAGTTAGCGGACATGCCTA TACGGATGAATATAGGGAAGTCAATCCGATGCAAAAGGTTCCCTCGTTGA AGATTGATGGCCATACCTTGTGCGACTCGGTGGCTATTATCCACTACCTG GAGGAAACTCGACCTCAGCCAGCACTTCTGCCCCAAGATCCGGTTAAAAG AGCAAAGATCCGTGAAATTGTGGAGCTCATTTGCTCGGGCATCCAGCCAC TGCAAAATGTATCTGTCCTAGATCATATAGGCAAGGATCAGAGTCTGCAA TGGGCACAACACTGGATTTCTCGAGGATTTCAGGGTCTCGAAAAGGTTCT TTCCCATTCGGCGGGCAAATTCTGTGTGGGAGATGAGCTCAGCATGGCTG ATATTTGCCTGGTACCTCAGGTGCGCAATGCCAGGAGATACAAAGCTGAC CTGACCCCATATCCCACCATAGTACGCTTGAATCAGGAACTACAAGAACT TGATGTCTTCAAAGCCACTCATCCCAGTACCCAGCCAGATTGTCCACCTG AATTCGCAAAAAAATAATCAAAACTTAAGATATATTACATTGCATTTATA AAGATGCTTGATATTAAATGGATTTCCAAAGCACCCAGAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 5282011..5282366 | 356..1 | 1735 | 99.2 | Minus |
chr3R | 27901430 | chr3R | 5281626..5281957 | 687..356 | 1645 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 5281362..5281564 | 888..686 | 1000 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 9196997..9197352 | 356..1 | 1780 | 100 | Minus |
3R | 31820162 | 3R | 9196612..9196943 | 687..356 | 1660 | 100 | Minus |
3R | 31820162 | 3R | 9196348..9196550 | 888..686 | 1015 | 100 | Minus |
3R | 31820162 | 3R | 9199039..9199170 | 682..551 | 165 | 75 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 5281362..5281562 | 688..888 | 99 | <- | Minus |
chr3R | 5281626..5281956 | 357..687 | 99 | <- | Minus |
chr3R | 5282011..5282366 | 1..356 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9362-RA | 1..741 | 77..817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9362-RA | 1..741 | 77..817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GstZ1-RA | 1..741 | 77..817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9362-RA | 1..741 | 77..817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GstZ1-RA | 1..741 | 77..817 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9362-RA | 22..909 | 1..888 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9362-RA | 22..909 | 1..888 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GstZ1-RA | 26..913 | 1..888 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9362-RA | 22..909 | 1..888 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GstZ1-RA | 26..913 | 1..888 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9455517..9455717 | 688..888 | 100 | <- | Minus |
3R | 9455781..9456111 | 357..687 | 100 | <- | Minus |
3R | 9456166..9456521 | 1..356 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9455517..9455717 | 688..888 | 100 | <- | Minus |
3R | 9455781..9456111 | 357..687 | 100 | <- | Minus |
3R | 9456166..9456521 | 1..356 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9455517..9455717 | 688..888 | 100 | <- | Minus |
3R | 9455781..9456111 | 357..687 | 100 | <- | Minus |
3R | 9456166..9456521 | 1..356 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 5281239..5281439 | 688..888 | 100 | <- | Minus |
arm_3R | 5281503..5281833 | 357..687 | 100 | <- | Minus |
arm_3R | 5281888..5282243 | 1..356 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9196348..9196548 | 688..888 | 100 | <- | Minus |
3R | 9196612..9196942 | 357..687 | 100 | <- | Minus |
3R | 9196997..9197352 | 1..356 | 100 | Minus |
Translation from 76 to 816
> LD48010.pep MASATQLTHRGIHLAGLYRSSWSKPLFRHLATKPILYSYWPSSCSWRVRV ALAIKKIDYDIKPTSLLKTVSGHAYTDEYREVNPMQKVPSLKIDGHTLCD SVAIIHYLEETRPQPALLPQDPVKRAKIREIVELICSGIQPLQNVSVLDH IGKDQSLQWAQHWISRGFQGLEKVLSHSAGKFCVGDELSMADICLVPQVR NARRYKADLTPYPTIVRLNQELQELDVFKATHPSTQPDCPPEFAKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17763-PA | 250 | GF17763-PA | 1..249 | 1..246 | 888 | 65.5 | Plus |
Dana\GF17762-PA | 220 | GF17762-PA | 7..220 | 32..246 | 799 | 67 | Plus |
Dana\GF12161-PA | 223 | GF12161-PA | 7..195 | 35..220 | 154 | 32.3 | Plus |
Dana\GF12160-PA | 223 | GF12160-PA | 7..206 | 35..235 | 148 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17372-PA | 246 | GG17372-PA | 1..246 | 1..246 | 1220 | 91.5 | Plus |
Dere\GG17371-PA | 220 | GG17371-PA | 7..220 | 32..246 | 799 | 67 | Plus |
Dere\GG21881-PA | 223 | GG21881-PA | 7..203 | 35..232 | 158 | 31.5 | Plus |
Dere\GG21880-PA | 224 | GG21880-PA | 7..200 | 35..229 | 149 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19138-PA | 220 | GH19138-PA | 7..220 | 32..246 | 797 | 66.5 | Plus |
Dgri\GH19140-PA | 247 | GH19140-PA | 27..242 | 32..246 | 755 | 62.5 | Plus |
Dgri\GH19139-PA | 218 | GH19139-PA | 17..214 | 32..238 | 686 | 63.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GstZ1-PA | 246 | CG9362-PA | 1..246 | 1..246 | 1305 | 100 | Plus |
GstZ2-PB | 220 | CG9363-PB | 8..220 | 33..246 | 794 | 67.3 | Plus |
GstZ2-PA | 227 | CG9363-PA | 15..227 | 33..246 | 790 | 66.8 | Plus |
GstZ2-PC | 215 | CG9363-PC | 4..215 | 34..246 | 789 | 67.1 | Plus |
GstE6-PA | 222 | CG17530-PA | 3..199 | 33..229 | 151 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23597-PA | 246 | GI23597-PA | 32..246 | 32..246 | 804 | 65.6 | Plus |
Dmoj\GI23596-PA | 220 | GI23596-PA | 7..220 | 32..246 | 797 | 66.5 | Plus |
Dmoj\GI20133-PA | 225 | GI20133-PA | 5..207 | 30..232 | 152 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13669-PA | 256 | GL13669-PA | 43..256 | 33..246 | 865 | 72.4 | Plus |
Dper\GL13668-PA | 240 | GL13668-PA | 7..240 | 32..246 | 770 | 61.3 | Plus |
Dper\GL17768-PA | 222 | GL17768-PA | 6..199 | 35..229 | 157 | 31.5 | Plus |
Dper\GL17783-PA | 226 | GL17783-PA | 1..203 | 30..232 | 149 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21731-PA | 231 | GA21731-PA | 18..231 | 33..246 | 863 | 72.4 | Plus |
Dpse\GA21732-PA | 220 | GA21732-PA | 7..220 | 32..246 | 799 | 67 | Plus |
Dpse\GA18702-PA | 222 | GA18702-PA | 6..199 | 35..229 | 152 | 31 | Plus |
Dpse\GA18748-PA | 226 | GA18748-PA | 1..200 | 30..229 | 147 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26257-PA | 246 | GM26257-PA | 1..246 | 1..246 | 1259 | 94.7 | Plus |
Dsec\GM26256-PA | 220 | GM26256-PA | 7..220 | 32..246 | 799 | 67 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20796-PA | 246 | GD20796-PA | 1..246 | 1..246 | 1276 | 95.9 | Plus |
Dsim\GD20795-PA | 220 | GD20795-PA | 7..220 | 32..246 | 799 | 67 | Plus |
Dsim\GD11370-PA | 224 | GD11370-PA | 7..200 | 35..229 | 144 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23570-PA | 220 | GJ23570-PA | 7..220 | 32..246 | 797 | 66.5 | Plus |
Dvir\GJ23571-PA | 162 | GJ23571-PA | 1..162 | 85..246 | 626 | 70.4 | Plus |
Dvir\GJ19903-PA | 228 | GJ19903-PA | 9..208 | 33..232 | 161 | 27.7 | Plus |
Translation from 76 to 816
> LD48010.hyp MASATQLTHRGIHLAGLYRSSWSKPLFRHLATKPILYSYWPSSCSWRVRV ALAIKKIDYDIKPTSLLKTVSGHAYTDEYREVNPMQKVPSLKIDGHTLCD SVAIIHYLEETRPQPALLPQDPVKRAKIREIVELICSGIQPLQNVSVLDH IGKDQSLQWAQHWISRGFQGLEKVLSHSAGKFCVGDELSMADICLVPQVR NARRYKADLTPYPTIVRLNQELQELDVFKATHPSTQPDCPPEFAKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GstZ1-PA | 246 | CG9362-PA | 1..246 | 1..246 | 1305 | 100 | Plus |
GstZ2-PB | 220 | CG9363-PB | 8..220 | 33..246 | 794 | 67.3 | Plus |
GstZ2-PA | 227 | CG9363-PA | 15..227 | 33..246 | 790 | 66.8 | Plus |
GstZ2-PC | 215 | CG9363-PC | 4..215 | 34..246 | 789 | 67.1 | Plus |
GstE6-PA | 222 | CG17530-PA | 3..199 | 33..229 | 151 | 29.4 | Plus |