BDGP Sequence Production Resources |
Search the DGRC for LD48066
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 480 |
Well: | 66 |
Vector: | pOT2 |
Associated Gene/Transcript | CG13604-RB |
Protein status: | LD48066.pep: gold |
Preliminary Size: | 3047 |
Sequenced Size: | 2557 |
Gene | Date | Evidence |
---|---|---|
CG13604 | 2002-11-17 | Blastp of sequenced clone |
CG13604 | 2008-04-29 | Release 5.5 accounting |
CG13604 | 2008-08-15 | Release 5.9 accounting |
CG13604 | 2008-12-18 | 5.12 accounting |
2557 bp (2557 high quality bases) assembled on 2002-11-17
GenBank Submission: BT003239
> LD48066.complete TCCTTCTGTTGGTTGCACTCTCTTTGGGTTGTTTTGGTTTACCTTTCTCA CGTTCTGTTCGATTCGGTTGATGGTTTTCCATTTTTCGGAGTGGCTTACA CGGTTATGTTGTTCTCCTCTCTTCCTGCACACTTCTGGATAATCTGGGAT ATGCTGCACAGTCATTAGCGATACCTATGAGCAGTTGGACGCCATTGTGG CCTGCTTTCCCTGGTGCGGTGCTGTCTCCTCGGGCACCCGCTGCATTCCG CGCAGCAGTCGATCCATCTCACTCGAGCCACACGTTAAGAGCCTGCACCT GACGCTTGCCTACCAGTTCCCGCAGGCACAGTTTAATGCACTGAAAGCAC TCGTGGAGACCTTAGACGCCAGCTGCGCTTCCAATTGGGAACTTCGTCTA TATTCCCGCGATCCTCGGCTCGCCACCAAACAAGTTCAAAAGGTAGTTTA TCCACACAACCCGCACGAGACGGATGAACTGGAGCTCCGAATCGGCGATT ACATCTATTTGAATACCGAGGTAGTAGACAGTTCCAGTGACGGTTGGGCC GAAGGCATATCTTGGTTGACCGGAAGCACCGGTCATTTGCCCGTCAATTA CACCGAACGCACCGCAGAATCGGACGCCTGGACCCTGCATCGTGTGGTCC AGCTCTCCAAGAGCGTAGCTTCATCATTAACTTCCGCCGAGGACTTGGAC ATTGTGGACGGACGCAGTATATCAACGGAGCCCGACGATCGTCAGAACAC AGCACATCCTGATATAATTGAAGGCTCTTCGTTTGAGGAATCCGAACAGA GCGTGGAGAAGTATTTGAGACAGACTTTGAAGCCCTGCCTGGAACTACCC TCAGTGCAATTGCTAAACAGCCACAACTTGACCCATCAGCATAACCCTAA CACGCCTACGATCGAGATAACGACCAATATGTCTTCTTCCTCCACCTCCA TGTCCAAGCAACCGGTGGACGAGATCTTGGTGGAACCACCGGCAGCCCAG CCTCCGCGTCCAGATGACACACTTAGTGTACACTCGGACCACTCCTTGCA TCCCGGATCCCTTGACGCCTCGCATGCCAAGAACAGAAAGATCTACATTA TGCGGCATGGCGAGCGAGTCGACTTTACTTTTGGAACATGGATTCCATAT TGCTTCGATGAGTTTGGAAATTACATGAGGAAGGATTTAAACATGCCGAA GACGCTGCCTCGTCGGAAGAACAGTCCGGAGGGCTGGCAGAATGATTCTC CGCTGACAAATGTGGGTGTCTATCAGGCCAATCTTATTGGTCAAGCTTTG CTGGAGGCTCAAGTGCAGATCGACCATGTTTACTGTTCGCCCTCGTATCG CTGCATCCAGACTTGCACCAGTGCGCTTGAGGGGCTGAAGCTTACGGGCA AGCAAAAAATCAAACTGGAGCCGGGCCTGTTTGAGTGGATGGCCTGGTAT CCGAGCGGTGTACCCGACTGGCTGACTAAGAACGAGCTGACCGAGGCCAA GTTCGACGTTGATTTGGATTATGAGCCGGTGCAGCCAGCGTCTGAGCTAA CTGCTCGCCTAAAGGAGTCCACCGAGCAGTTTTATGAACGTAACCATGAC GTTATCCTCCAGCTATTGGAGCAGACAACTGGAAATATTTTGGTTGTTGC CCATGCCACCACACTGGACACTTGTTCCCGTCAACTGACCGGTGGAGTTC CACGCAGCACGAACGAATTGCGCCAAGTCATCCACAAGATCCCCTACTGC AGCCTGGCAACGGTGGAACAGGTGGACGGCGTCTGGAAGCTGGTTGAACC CGAATGTCTTCCGGTGACGCACTCAAAGAATCCGCGGTTCGAGTGGAACG CCTTGTCGGCCACCTAGTGCCAGTGCTTAGAGCAGTTTCTCTGCAAGCAT TGAGACTGAGACTCAACTCGATTGGGACGGACCTGGAGGTGAATCACACG CTGAAGAAACTATACGTAAATTTTTTGTTCGCTTAGCTATTTAAAGTACG TATTGATTTACTGTTTAGAAATTGGCGCCGCATTAAGTTGATTGTACTGC CATACAAATTTTAAAGTAATTTATATGTACACTTATGATGCAAACCGATG GAATGCGATTTTGCTGCGGTGTATAAACAATCCATCTATTATAATTGCAC TGCTTATTGAGAAGCCAGCGCGACGGACTCATACTTTATTGCAATCAATG CGATCTATTGACTATATATATTGAATATATACATTTATACCGTATGCCAG TAATTATACTAATTGAGCGCTAGCTCGCCGCTTTAGCCATAGACTAACTT GCCCTGTTACTAGCTTAGTTGTTAGATTGTTTGATTAGCCTTGCTGCGTA ACGCAGTTTTTTTGTAGCCATTTATCCAAGAGGCAGACTTTTCTTAGCAA CTTGTTGAGACTACTCCGTACGTAAAGCCCAAACATATATCGATATTATC GACTAGATTTAGAAGTACAAAACCATGTAACAACGCACAACATAATGGAA CAATAAACAGTATACATTGAACACGTGTAATGCCAAAAAAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13604-RB | 2683 | CG13604-RB | 74..2610 | 1..2538 | 12650 | 99.9 | Plus |
CG13604-RA | 3119 | CG13604-RA | 671..3046 | 162..2538 | 11845 | 99.9 | Plus |
CG13604-RC | 2453 | CG13604-RC | 107..2380 | 264..2538 | 11335 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 19812181..19813085 | 2534..1629 | 4405 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 19813146..19814027 | 1628..747 | 4350 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 19814090..19814402 | 746..434 | 1565 | 100 | Minus |
chr3R | 27901430 | chr3R | 19815149..19815411 | 263..1 | 1300 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 19814458..19814630 | 436..264 | 865 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 23988802..23989710 | 2538..1629 | 4500 | 99.9 | Minus |
3R | 32079331 | 3R | 23989771..23990652 | 1628..747 | 4410 | 100 | Minus |
3R | 32079331 | 3R | 23990715..23991027 | 746..434 | 1565 | 100 | Minus |
3R | 32079331 | 3R | 23991774..23992036 | 263..1 | 1315 | 100 | Minus |
3R | 32079331 | 3R | 23991083..23991255 | 436..264 | 865 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 23729633..23730541 | 2538..1629 | 4510 | 99.8 | Minus |
3R | 31820162 | 3R | 23730602..23731483 | 1628..747 | 4410 | 100 | Minus |
3R | 31820162 | 3R | 23731546..23731858 | 746..434 | 1565 | 100 | Minus |
3R | 31820162 | 3R | 23732605..23732867 | 263..1 | 1315 | 100 | Minus |
3R | 31820162 | 3R | 23731914..23732086 | 436..264 | 865 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19812181..19813085 | 1629..2534 | 99 | <- | Minus |
chr3R | 19813146..19814027 | 747..1628 | 99 | <- | Minus |
chr3R | 19814090..19814402 | 434..746 | 100 | <- | Minus |
chr3R | 19814461..19814630 | 264..433 | 100 | <- | Minus |
chr3R | 19815149..19815411 | 1..263 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13604-RA | 546..2256 | 154..1867 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13604-RA | 546..2256 | 154..1867 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13604-RE | 546..2292 | 154..1903 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13604-RA | 546..2256 | 154..1867 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13604-RE | 546..2292 | 154..1903 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13604-RB | 1..2533 | 1..2534 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13604-RB | 1..2533 | 1..2534 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13604-RB | 1..2533 | 1..2534 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13604-RB | 1..2533 | 1..2534 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13604-RB | 1..2533 | 1..2534 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23988806..23989710 | 1629..2534 | 99 | <- | Minus |
3R | 23989771..23990652 | 747..1628 | 100 | <- | Minus |
3R | 23990715..23991027 | 434..746 | 100 | <- | Minus |
3R | 23991086..23991255 | 264..433 | 100 | <- | Minus |
3R | 23991774..23992036 | 1..263 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23988806..23989710 | 1629..2534 | 99 | <- | Minus |
3R | 23989771..23990652 | 747..1628 | 100 | <- | Minus |
3R | 23990715..23991027 | 434..746 | 100 | <- | Minus |
3R | 23991086..23991255 | 264..433 | 100 | <- | Minus |
3R | 23991774..23992036 | 1..263 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23988806..23989710 | 1629..2534 | 99 | <- | Minus |
3R | 23989771..23990652 | 747..1628 | 100 | <- | Minus |
3R | 23990715..23991027 | 434..746 | 100 | <- | Minus |
3R | 23991086..23991255 | 264..433 | 100 | <- | Minus |
3R | 23991774..23992036 | 1..263 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19816808..19816977 | 264..433 | 100 | <- | Minus |
arm_3R | 19817496..19817758 | 1..263 | 100 | Minus | |
arm_3R | 19815493..19816374 | 747..1628 | 100 | <- | Minus |
arm_3R | 19814528..19815432 | 1629..2534 | 99 | <- | Minus |
arm_3R | 19816437..19816749 | 434..746 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23729637..23730541 | 1629..2534 | 99 | <- | Minus |
3R | 23730602..23731483 | 747..1628 | 100 | <- | Minus |
3R | 23731546..23731858 | 434..746 | 100 | <- | Minus |
3R | 23731917..23732086 | 264..433 | 100 | <- | Minus |
3R | 23732605..23732867 | 1..263 | 100 | Minus |
Translation from 928 to 1866
> LD48066.pep MSSSSTSMSKQPVDEILVEPPAAQPPRPDDTLSVHSDHSLHPGSLDASHA KNRKIYIMRHGERVDFTFGTWIPYCFDEFGNYMRKDLNMPKTLPRRKNSP EGWQNDSPLTNVGVYQANLIGQALLEAQVQIDHVYCSPSYRCIQTCTSAL EGLKLTGKQKIKLEPGLFEWMAWYPSGVPDWLTKNELTEAKFDVDLDYEP VQPASELTARLKESTEQFYERNHDVILQLLEQTTGNILVVAHATTLDTCS RQLTGGVPRSTNELRQVIHKIPYCSLATVEQVDGVWKLVEPECLPVTHSK NPRFEWNALSAT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17972-PA | 756 | GF17972-PA | 445..756 | 1..312 | 1543 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12383-PA | 751 | GG12383-PA | 440..751 | 1..312 | 1658 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23562-PA | 1040 | GH23562-PA | 726..1040 | 1..312 | 1459 | 82.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13604-PE | 763 | CG13604-PE | 440..751 | 1..312 | 1674 | 100 | Plus |
CG13604-PD | 717 | CG13604-PD | 406..717 | 1..312 | 1674 | 100 | Plus |
CG13604-PC | 312 | CG13604-PC | 1..312 | 1..312 | 1674 | 100 | Plus |
CG13604-PB | 312 | CG13604-PB | 1..312 | 1..312 | 1674 | 100 | Plus |
CG13604-PA | 751 | CG13604-PA | 440..751 | 1..312 | 1674 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23455-PA | 757 | GI23455-PA | 447..757 | 4..312 | 1406 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24157-PA | 753 | GL24157-PA | 442..753 | 1..312 | 1556 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12397-PB | 719 | GA12397-PB | 408..719 | 1..312 | 1558 | 90.4 | Plus |
Dpse\GA12397-PA | 753 | GA12397-PA | 442..753 | 1..312 | 1556 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23521-PA | 653 | GM23521-PA | 342..653 | 1..312 | 1687 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18330-PA | 709 | GD18330-PA | 398..709 | 1..312 | 1684 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22576-PA | 758 | GJ22576-PA | 457..758 | 13..312 | 1403 | 82.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11599-PA | 752 | GK11599-PA | 443..752 | 1..312 | 1448 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10837-PA | 751 | GE10837-PA | 440..751 | 1..312 | 1667 | 98.1 | Plus |
Translation from 928 to 1866
> LD48066.hyp MSSSSTSMSKQPVDEILVEPPAAQPPRPDDTLSVHSDHSLHPGSLDASHA KNRKIYIMRHGERVDFTFGTWIPYCFDEFGNYMRKDLNMPKTLPRRKNSP EGWQNDSPLTNVGVYQANLIGQALLEAQVQIDHVYCSPSYRCIQTCTSAL EGLKLTGKQKIKLEPGLFEWMAWYPSGVPDWLTKNELTEAKFDVDLDYEP VQPASELTARLKESTEQFYERNHDVILQLLEQTTGNILVVAHATTLDTCS RQLTGGVPRSTNELRQVIHKIPYCSLATVEQVDGVWKLVEPECLPVTHSK NPRFEWNALSAT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13604-PC | 312 | CG13604-PC | 1..312 | 1..312 | 1674 | 100 | Plus |
CG13604-PB | 312 | CG13604-PB | 1..312 | 1..312 | 1674 | 100 | Plus |
CG13604-PD | 717 | CG13604-PD | 406..717 | 1..312 | 1674 | 100 | Plus |
CG13604-PA | 751 | CG13604-PA | 440..751 | 1..312 | 1674 | 100 | Plus |
CG13604-PE | 763 | CG13604-PE | 440..751 | 1..312 | 1674 | 100 | Plus |