BDGP Sequence Production Resources |
Search the DGRC for LP01149
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 11 |
Well: | 49 |
Vector: | pOT2 |
Associated Gene/Transcript | CG12237-RA |
Protein status: | LP01149.pep: gold |
Preliminary Size: | 1931 |
Sequenced Size: | 1669 |
Gene | Date | Evidence |
---|---|---|
CG12237 | 2001-01-01 | Release 2 assignment |
CG12237 | 2001-10-10 | Blastp of sequenced clone |
CG12237 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12237 | 2008-04-29 | Release 5.5 accounting |
CG12237 | 2008-08-15 | Release 5.9 accounting |
CG12237 | 2008-12-18 | 5.12 accounting |
1669 bp (1669 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061529
> LP01149.complete CACAACGGTGTTTGCGCCCAGGCGACCTGGCATTTAGCATCGTGGGCGGC GCGGACACACTGGTCCTCGCACAAAACTCGCACTCGAACTTGCTCTCCGC GCGCTCTGAGCGCATCCATAGCCGGAGCAGGAGCGGAGCACACGATGTCC TCGAACCAGGAGCAGTCACCCGCCGCAGTGGCCGCGGCCGTGGCCAGCTG CAGGCTAAGGAAACAGCAGCGCCGTCGACTGGCGGCCTTCGACTTCGACC ACACGATCGTTTCCCAGAACACGGACACCGTGGTGCGCGACCTGCTGCCC ACGGAGGTGACGAGCGCCAAGGTCAACGAGCTGGTTGAAAACGACTGCTG GACGGAGTACATGGCCGAGGTGTTTCGCTTGCTGCACGAGCAACAGGTGT CGGAGGCGCGCATTAGGGACACCATTCGTGGCATACCCGAGGTGCCCGGA TTCGTGCGCCTGATCAAGCATCTGGCCAAGCGGCTGCACTACGACCTGAT CATCATCAGTGACTCGAACAGCGTCTTTATCGACGAGTGGCTGCGGGCAC ATAACTTGGCCGATTGCTTTGTGGCCATCTTTACCAATCCGGCGGAATTC GATGCCTCCGGACGGCTTATGGTCCGCGCCCACCACCAGCAGTCGGATTG CAAGCTGAGCGCCAGCAATTTGTGCAAGGGCCGCGTGCTGGAGCACTTTG TCATCGAGCAGGACCTGCGGCGCAGCATACGCTATGACCACGTCTTCTAT GTGGGCGACGGCAACAACGACATCTGCCCCGTGCTGCGGCAGCGGGCGTG CGACTTTGCCTGCGCCCGCAAGGGGTTCGCAATGGAGAAGCACCTGCTCC GCAATCGCAGCAAATTGAAGCTGCGCGCCCAGCTGCTGATCTGGAAGAGC GGCTTCGATCTGATGGACCAGATGCTGGCCCTGCCGCAGCTGAAGACCCC CCAGGTGCAGGGCGATGGGGATCAGCCGGATCAGGATGCGGATACGGATG GCAAAGTACCGGAGGTGGCACGTCGGGCATCGGCAGTTGCCGGGCCGACC AAGTCGCCCAACTAAGGTGGCATGTGCTCGCATTTGGCACCGGCACGAGT AAGTAGAACGGGTAATCCTCGAGAGTGACGATTGCCCAGCTGCAGGATGG CCATCGCATAGGAAACTGCTACTTTGGAGCACGATATGGTATTTCATGGT ATCGAAAGATACCGTTCCTTGTTCCTTGTTTTGGACTATGCTGTGCGATA GCAATCATGCGGTTCTACGATGCCAGGAGTACTCGTGAGGGTCTCAAATG CGAAACCATCCATCCCGATCCCATCATCCCCATCCAGTTGTTGGTTGCAT CATGTGGTCTGGTCTGGTTCTTTATTTGATCCGCTCGCCACTTCGCTGCA CTGGCCGTGCCAAGTGTACTGGGTGGATCTGTATTTATATCTGTGTGCCG GGACTTTACCTGCAAAACAATTTGTGGAAATCCAAACAGTACAACTTCGG AGGTGTGCCCAGGACTTGAGGCGTCAATTTGTGCTGCGGCTGTTAGTGTT TATTCCATGTGTCTATATTTAAACCTGTTGTAATTGAAGCTATTGCAAGC GCTGTATATGAGTGTCCATATTATATGCATTTGAATGTGTGTTTTGCCGT TAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12237-RA | 1677 | CG12237-RA | 26..1677 | 1..1652 | 8260 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 19529983..19531633 | 1651..1 | 8240 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 19641190..19642841 | 1652..1 | 8260 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 19649288..19650939 | 1652..1 | 8260 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
S2 | 1735 | S2 S2 1735bp | 297..362 | 1578..1648 | 118 | 67.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 19529983..19531633 | 1..1651 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12237-RA | 1..921 | 145..1065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12237-RA | 1..921 | 145..1065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12237-RA | 1..921 | 145..1065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12237-RA | 1..921 | 145..1065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12237-RA | 1..921 | 145..1065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12237-RA | 26..1676 | 1..1651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12237-RA | 26..1676 | 1..1651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12237-RA | 29..1679 | 1..1651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12237-RA | 26..1676 | 1..1651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12237-RA | 29..1679 | 1..1651 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19641191..19642841 | 1..1651 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19641191..19642841 | 1..1651 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19641191..19642841 | 1..1651 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 19535224..19536874 | 1..1651 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19649289..19650939 | 1..1651 | 100 | Minus |
Translation from 0 to 1064
> LP01149.hyp HNGVCAQATWHLASWAARTHWSSHKTRTRTCSPRALSASIAGAGAEHTMS SNQEQSPAAVAAAVASCRLRKQQRRRLAAFDFDHTIVSQNTDTVVRDLLP TEVTSAKVNELVENDCWTEYMAEVFRLLHEQQVSEARIRDTIRGIPEVPG FVRLIKHLAKRLHYDLIIISDSNSVFIDEWLRAHNLADCFVAIFTNPAEF DASGRLMVRAHHQQSDCKLSASNLCKGRVLEHFVIEQDLRRSIRYDHVFY VGDGNNDICPVLRQRACDFACARKGFAMEKHLLRNRSKLKLRAQLLIWKS GFDLMDQMLALPQLKTPQVQGDGDQPDQDADTDGKVPEVARRASAVAGPT KSPN*
Translation from 144 to 1064
> LP01149.pep MSSNQEQSPAAVAAAVASCRLRKQQRRRLAAFDFDHTIVSQNTDTVVRDL LPTEVTSAKVNELVENDCWTEYMAEVFRLLHEQQVSEARIRDTIRGIPEV PGFVRLIKHLAKRLHYDLIIISDSNSVFIDEWLRAHNLADCFVAIFTNPA EFDASGRLMVRAHHQQSDCKLSASNLCKGRVLEHFVIEQDLRRSIRYDHV FYVGDGNNDICPVLRQRACDFACARKGFAMEKHLLRNRSKLKLRAQLLIW KSGFDLMDQMLALPQLKTPQVQGDGDQPDQDADTDGKVPEVARRASAVAG PTKSPN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20415-PA | 298 | GF20415-PA | 17..298 | 19..306 | 1322 | 86.2 | Plus |
Dana\GF20414-PA | 268 | GF20414-PA | 21..265 | 1..263 | 439 | 37.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18039-PA | 307 | GG18039-PA | 1..307 | 1..306 | 1475 | 93.2 | Plus |
Dere\GG19240-PA | 262 | GG19240-PA | 30..260 | 27..266 | 407 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24805-PA | 299 | GH24805-PA | 15..294 | 18..301 | 1151 | 75.4 | Plus |
Dgri\GH24804-PA | 256 | GH24804-PA | 5..250 | 10..262 | 382 | 33.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12237-PA | 306 | CG12237-PA | 1..306 | 1..306 | 1588 | 100 | Plus |
CG14212-PA | 262 | CG14212-PA | 30..257 | 27..261 | 394 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21532-PA | 296 | GI21532-PA | 16..283 | 19..296 | 1130 | 76.3 | Plus |
Dmoj\GI21530-PA | 265 | GI21530-PA | 19..257 | 23..260 | 334 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27061-PA | 294 | GL27061-PA | 15..294 | 19..306 | 1265 | 81.7 | Plus |
Dper\GL27060-PA | 265 | GL27060-PA | 32..261 | 27..261 | 395 | 37 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11499-PA | 294 | GA11499-PA | 15..294 | 19..306 | 1268 | 82.4 | Plus |
Dpse\GA12827-PA | 265 | GA12827-PA | 32..261 | 27..261 | 389 | 36.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22723-PA | 306 | GM22723-PA | 1..306 | 1..306 | 1598 | 97.7 | Plus |
Dsec\GM22975-PA | 262 | GM22975-PA | 30..260 | 27..266 | 412 | 37.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24455-PA | 148 | GD24455-PA | 1..148 | 159..306 | 778 | 97.3 | Plus |
Dsim\GD17453-PA | 262 | GD17453-PA | 30..260 | 27..266 | 408 | 37 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16005-PA | 308 | GJ16005-PA | 24..291 | 21..294 | 1117 | 76 | Plus |
Dvir\GJ16003-PA | 259 | GJ16003-PA | 19..254 | 23..262 | 382 | 35.5 | Plus |