BDGP Sequence Production Resources |
Search the DGRC for LP01201
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 12 |
Well: | 1 |
Vector: | pOT2 |
Associated Gene/Transcript | kay-RA |
Protein status: | LP01201.pep: gold |
Sequenced Size: | 3555 |
Gene | Date | Evidence |
---|---|---|
CG15507 | 2008-09-03 | Manual selection by Ken Wan |
3555 bp assembled on 2009-05-26
GenBank Submission: BT088433.1
> LP01201.complete AAACGCGACTGCAGCAAACGGCAGCGGAAAGCCACGCGGCCGTCTCCCTC TCACTCTCGTTCTCGCTCGCGCCACTCTCTCTGTCTCTCTCTCTCACCCC CGTTAATCGGCCGCAGTCCATCAGTGCCACCCAACCTCCCCCGCCCCTAC GCCCCACGCCCACTAGTGCTCTCCCGCTCGCGCGCGCCGCGAGCCACGTT GGTTGGAGCGAGACAAAGATTCCCCGCCCCCCAAAGGAAATCCAGCCAAC TTGTTGTTGTTACACTTGATTGTTTAACACTTTCACAAGTGCAAAGCCAG AACATTCCCAACAAACCGTCAAAAAACTGTGTGATATCTGCAATACAGCA ACGCTTTTTTCCCGCAGAGCGGTAGAAATCCGTGGATAATTACGAAATAT TCAACCTAAAGTCGTTCAAAGTTCGATAAACAACGGTGTGTGGAGCGGGG CGTGGTTCGCCCGACTTTAATCTACAGAATTGACTGGAAAAGGCCAAAAA GGCGAAAAGAGAGTGTGTGTGTGTGTGCTCGTGTGCTGGTGTTTGATTGT GTGTGTGAGTGCCAGCTGCACATGTAAGTTTTGTTTATAATCGCCAACTG GAGAGCAGCAACAATGAAAGTCAAAGTGGAGCGCACAACGAAAAAGCCCG CCATCAGAAAGCCCGAGGATCCAGATCCGGCGGAAGAGGACAGGGTCAAG ATGGTGCAGGATGACCCAGAGGACCAGGAGAACCAGGCGGTGGATGAGGA GGAGCTGGACTTTCTGCCCGCCGATCTAAGCGCTGCGATATCGACGGCGA CAACGAAAATAGCAACACCGACGCGCAATCTTATCCTCGGCAACTTTGAG ACCGGCCAGAGTGTTCTCACACTGACGACGCCCACGTTGACGCCGACCAC CACGCGCAACATCGAGGACACACTGGGCCACTTGCTCTCGGACACGCAGA CCGATCGTGTGGCTGGTTGCGCGGGATTTGCAGTGCCAAAGGTGCTACCC AATGCCATTGATGTCCTGGGCATGGGTATTCCCACCGGTGTTTCGTCGCT CCCACTTCAGCAGACATTCGATTTGAGCCTGGGGCAGGGCAGCGAGTCCG AGGACTCCAACGCTTCGTACAACGATACGCAGATGAACGAGGAGCAGGAC ACGACCGATACTTCAAGTGCCCATACGGACAGCACCTCGTACCAAGCTGG CCACATCATGGCGGGCAGCGTGAACGGCGGCGGTGTCAACAACTTCTCCA ATGTCCTGGCCGCCGTGAGCTCTAGCCGCGGATCGGCGTCGGTGGGCAGC AGCAACGCGAATACCTCAAATACGCCGGCTCGTCGTGGCGGTGGCAGACG CCCCAACCGGTCGACGAACATGACCCCGGAGGAGGAGCAGAAGCGGGCCG TGCGCCGGGAGCGGAACAAACAGGCGGCGGCCCGTTGCCGCAAGAGGCGC GTGGACCAGACCAACGAGCTCACCGAGGAGGTGGAGCAGCTGGAGAAGCG GGGCGAGAGCATGCGCAAGGAGATCGAGGTGCTGACGAATAGCAAGAATC AGCTGGAGTACCTTCTGGCCACCCACCGGGCCACCTGCCAAAAGATTCGC TCCGACATGCTGAGCGTGGTCACCTGCAACGGTCTGATTGCCCCGGCCGG ACTCCTGAGTGCAGGGAGCAGCGGCAGCGGCGCGAGCAGCCATCACAACC ACAACAGCAACGACAGCAGCAACGGCACGATTACGGGCATGGACGCCACG CTGAACTCCACCGGGAGGAGCAATTCACCCTTGGATCTCAAGCCGGCGGC GAACATCGATAGCCTGCTGATGCACATCAAGGACGAGCCACTCGATGGCG CCATCGACTCAGGATCCAGCCTGGACCAGGACGGTCCGCCGCCCAGCAAG CGCATCACCTTGCCGCCCATGTCCACGATGCCGCACGTTCACTTGTCCAC GATATTAACGCCCACCGGCGCCTCGTCGGGATCTCTGCAGACGCCGATCA CGAGCACGGCGCCCGGCGGATTCGGCAGCGCCTTCCCGGTGACCTCCAAC GGCAGCAGCATCAACAACATCAACAGCATCGGCAACAACATGAACTCTCC CACGCTGAATGCGCATAACAAGGTGCCTAAGGAGCGGCCCAATACGCTGG CTTTCCAGCGTCCTCTGGGCCAGATGCACCTCACCATGGCCAACAACAAG GCGGGTGGGCCCACGCAGATCCAGGGCGTGCCCATCCAGACGCCCTCGAC CGGCACCTTCAACTTCGACTCCCTGATGGACGGCGGCACTGGGCTAACGC CCGTCTCCGGACCCCTCGTACCGAACAGCTCCTCCACGAACAAGCACCCG CTGGAGCTGCCCACGCCCACCGCCGAGCCGTCCAAGCTGGTCAGCTTATA ACCGGACCGGATCTGGGACGGGGATGGGGGCCGAGTCAGGATTAAGTTAA GTTTTATATAGTTGGCAGGCAAACAACGGAAGGAAACCGCGAAGCACTTT TCTAGTTGTAGGAGATGTTTTCATTTTTGTAATATGCTGTAATATGCGTA AACGTGACGAATGTGTTGTTTCGTTAACTCTAATGTTTTTGTATTATTAT CTTTATTATGGTTAATTTATGATTTCGCTATGTCTTTTACATACGCCGAG GAGCTATGTACATATGTTATGTACTTGTAATTTGTGCAATTTTCAAACCT CTTCATTGCGCGTTGTATATTTTCAAAAAATATAAGAACGCGAACGCGAA CGCGAACGACCGACGATGCATGATGAGAATGATAAGGATAATGATGATAA TAGGGCGTGTAGATTTGCAGGATGCGTTGTGATATTTATTATAAAACGAA TACAAAAGATGCGAGGATGAAACAAAGTAGAAAGCAAACAGGAGCGTCTA ATGAAAGGAACTAAGCCGGTTTTAAAATTGTACATTTAAACGAATCGTAA AGCGTAAATATACTATAAAACAAAACAAAGTGAATATATATTCAGCATAC AAACTAAATACAATGCCTTGAGAGAGAATTAAGAAATGCAAACCTTTATA TATAGAGATCTACATACATATATGTATGCATGTACATTTAAAGCTAAACA ATAATGGCGTTGAAGCGAGTTTTATATTGAGCAAAAGCAAATGTGAAATG AGATAAATATACTTATTGTGTACTCTGTAAGCTGCAGTAGAAACCAAAAT ATATTTTTACTAAACGCAACATTGCGCTATTTTCAAATACCATTTATAAG AAATGACAAAAGCAAAGCAATTATTTAATATGTAATTATGTATTATGTAT ACCTATATCTACCTACCCACAACCTTAAATCAAAAAACCCAAAACGATTC AACAAAAGCTGATCAGGTAAAGCAACTCTCGCCAGTTTCCACACTAAATT CTCAGAATATTCAAAATTTTAATCTATACAAAACCAAACCGATTGATAGC AAATAAATGCACTTATAAGGGCAGAAAAACACCAAAATTTAAAAATGAAA TGGAATAAAATAGAAATAAAAAGACCGACAAAACCTAAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 25614354..25616726 | 1164..3536 | 11685 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 25595541..25596375 | 1..835 | 4115 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 25613960..25614287 | 836..1163 | 1625 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 29791787..29794162 | 1164..3539 | 11880 | 100 | Plus |
3R | 32079331 | 3R | 29772987..29773821 | 1..835 | 4175 | 100 | Plus |
3R | 32079331 | 3R | 29791393..29791720 | 836..1163 | 1640 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 29532618..29534993 | 1164..3539 | 11880 | 100 | Plus |
3R | 31820162 | 3R | 29513818..29514652 | 1..835 | 4175 | 100 | Plus |
3R | 31820162 | 3R | 29532224..29532551 | 836..1163 | 1640 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2360..2468 | 1665..1773 | 158 | 60.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2925..3024 | 1678..1771 | 153 | 65 | Plus |
Dbuz\INE-1 | 1467 | Dbuz\INE-1 ISBU1 1467bp | 539..700 | 3224..3061 | 149 | 59.8 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2361..2409 | 2047..2095 | 146 | 77.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1539..1578 | 2056..2095 | 146 | 85 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1075..1140 | 1665..1727 | 142 | 72.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2472..2528 | 2047..2103 | 141 | 71.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2430..2473 | 2047..2090 | 139 | 79.5 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 1595..1676 | 3218..3301 | 127 | 66.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1521..1552 | 1696..1727 | 124 | 87.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1493..1551 | 2038..2095 | 121 | 69.5 | Plus |
TAHRE | 10463 | TAHRE OSV 10463bp | 7951..8117 | 3293..3468 | 120 | 58.9 | Plus |
Dbuz\BuT4 | 1447 | Dbuz\BuT4 BUT4 1447bp | 386..423 | 3084..3047 | 118 | 78.9 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1066..1128 | 1665..1727 | 117 | 65.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 25595636..25596375 | 96..835 | 92 | -> | Plus |
chr3R | 25613960..25614287 | 836..1163 | 99 | -> | Plus |
chr3R | 25614354..25614852 | 1164..1662 | 99 | == | Plus |
chr3R | 25614926..25616726 | 1736..3536 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
kay-RA | 1..1788 | 614..2401 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
kay-RA | 1..1788 | 614..2401 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
kay-RA | 1..1788 | 614..2401 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
kay-RA | 1..1788 | 614..2401 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
kay-RA | 9..3501 | 1..3493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
kay-RA | 94..3586 | 1..3493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
kay-RA | 96..3588 | 1..3493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
kay-RA | 96..3585 | 1..3490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29772987..29773821 | 1..835 | 100 | -> | Plus |
3R | 29791393..29791720 | 836..1163 | 100 | -> | Plus |
3R | 29791787..29794159 | 1164..3536 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29772987..29773821 | 1..835 | 100 | -> | Plus |
3R | 29791393..29791720 | 836..1163 | 100 | -> | Plus |
3R | 29791787..29794159 | 1164..3536 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29772987..29773821 | 1..835 | 100 | -> | Plus |
3R | 29791393..29791720 | 836..1163 | 100 | -> | Plus |
3R | 29791787..29794159 | 1164..3536 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 25598709..25599543 | 1..835 | 100 | -> | Plus |
arm_3R | 25617115..25617442 | 836..1163 | 100 | -> | Plus |
arm_3R | 25617509..25619881 | 1164..3536 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 29513818..29514652 | 1..835 | 100 | -> | Plus |
3R | 29532224..29532551 | 836..1163 | 100 | -> | Plus |
3R | 29532618..29534990 | 1164..3536 | 100 | Plus |
Translation from 613 to 2400
> LP01201.pep MKVKVERTTKKPAIRKPEDPDPAEEDRVKMVQDDPEDQENQAVDEEELDF LPADLSAAISTATTKIATPTRNLILGNFETGQSVLTLTTPTLTPTTTRNI EDTLGHLLSDTQTDRVAGCAGFAVPKVLPNAIDVLGMGIPTGVSSLPLQQ TFDLSLGQGSESEDSNASYNDTQMNEEQDTTDTSSAHTDSTSYQAGHIMA GSVNGGGVNNFSNVLAAVSSSRGSASVGSSNANTSNTPARRGGGRRPNRS TNMTPEEEQKRAVRRERNKQAAARCRKRRVDQTNELTEEVEQLEKRGESM RKEIEVLTNSKNQLEYLLATHRATCQKIRSDMLSVVTCNGLIAPAGLLSA GSSGSGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKPAANIDS LLMHIKDEPLDGAIDSGSSLDQDGPPPSKRITLPPMSTMPHVHLSTILTP TGASSGSLQTPITSTAPGGFGSAFPVTSNGSSINNINSIGNNMNSPTLNA HNKVPKERPNTLAFQRPLGQMHLTMANNKAGGPTQIQGVPIQTPSTGTFN FDSLMDGGTGLTPVSGPLVPNSSSTNKHPLELPTPTAEPSKLVSL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23375-PA | 529 | GF23375-PA | 107..529 | 143..595 | 1317 | 68.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11694-PA | 549 | GG11694-PA | 25..549 | 74..595 | 2232 | 86.7 | Plus |
Dere\GG11693-PA | 82 | GG11693-PA | 1..74 | 1..74 | 343 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14331-PA | 796 | GH14331-PA | 382..796 | 160..595 | 1033 | 56.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
kay-PA | 595 | CG33956-PA | 1..595 | 1..595 | 3046 | 100 | Plus |
kay-PG | 646 | CG33956-PG | 1..646 | 1..595 | 2984 | 92.1 | Plus |
kay-PB | 546 | CG33956-PB | 25..546 | 74..595 | 2676 | 99.8 | Plus |
kay-PF | 755 | CG33956-PF | 235..755 | 75..595 | 2673 | 100 | Plus |
kay-PD | 722 | CG33956-PD | 202..722 | 75..595 | 2673 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10426-PA | 784 | GI10426-PA | 359..784 | 159..595 | 1150 | 61.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23721-PA | 526 | GL23721-PA | 25..526 | 74..595 | 1189 | 61.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\kay-PB | 598 | GA30111-PB | 1..598 | 1..595 | 1180 | 55.6 | Plus |
Dpse\kay-PD | 778 | GA30111-PD | 352..778 | 152..595 | 1166 | 64.8 | Plus |
Dpse\kay-PA | 738 | GA30111-PA | 312..738 | 152..595 | 1163 | 65.1 | Plus |
Dpse\kay-PC | 558 | GA13774-PA | 131..558 | 151..595 | 1161 | 64.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12821-PA | 549 | GM12821-PA | 25..549 | 74..595 | 2368 | 94.9 | Plus |
Dsec\GM12820-PA | 75 | GM12820-PA | 1..74 | 1..74 | 365 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21465-PA | 498 | GD21465-PA | 25..498 | 74..595 | 1999 | 86.1 | Plus |
Dsim\GD21464-PA | 75 | GD21464-PA | 1..74 | 1..74 | 367 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10642-PA | 792 | GJ10642-PA | 337..792 | 152..595 | 1192 | 60.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11924-PA | 620 | GK11924-PA | 50..620 | 46..595 | 1018 | 54 | Plus |
Translation from 613 to 2400
> LP01201.hyp MKVKVERTTKKPAIRKPEDPDPAEEDRVKMVQDDPEDQENQAVDEEELDF LPADLSAAISTATTKIATPTRNLILGNFETGQSVLTLTTPTLTPTTTRNI EDTLGHLLSDTQTDRVAGCAGFAVPKVLPNAIDVLGMGIPTGVSSLPLQQ TFDLSLGQGSESEDSNASYNDTQMNEEQDTTDTSSAHTDSTSYQAGHIMA GSVNGGGVNNFSNVLAAVSSSRGSASVGSSNANTSNTPARRGGGRRPNRS TNMTPEEEQKRAVRRERNKQAAARCRKRRVDQTNELTEEVEQLEKRGESM RKEIEVLTNSKNQLEYLLATHRATCQKIRSDMLSVVTCNGLIAPAGLLSA GSSGSGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKPAANIDS LLMHIKDEPLDGAIDSGSSLDQDGPPPSKRITLPPMSTMPHVHLSTILTP TGASSGSLQTPITSTAPGGFGSAFPVTSNGSSINNINSIGNNMNSPTLNA HNKVPKERPNTLAFQRPLGQMHLTMANNKAGGPTQIQGVPIQTPSTGTFN FDSLMDGGTGLTPVSGPLVPNSSSTNKHPLELPTPTAEPSKLVSL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
kay-PA | 595 | CG33956-PA | 1..595 | 1..595 | 3046 | 100 | Plus |
kay-PG | 646 | CG33956-PG | 1..646 | 1..595 | 2984 | 92.1 | Plus |
kay-PB | 546 | CG33956-PB | 25..546 | 74..595 | 2676 | 99.8 | Plus |
kay-PF | 755 | CG33956-PF | 235..755 | 75..595 | 2673 | 100 | Plus |
kay-PD | 722 | CG33956-PD | 202..722 | 75..595 | 2673 | 100 | Plus |