BDGP Sequence Production Resources |
Search the DGRC for LP01642
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 16 |
Well: | 42 |
Vector: | pOT2 |
Associated Gene/Transcript | CG2444-RA |
Protein status: | LP01642.pep: gold |
Preliminary Size: | 635 |
Sequenced Size: | 651 |
Gene | Date | Evidence |
---|---|---|
CG2444 | 2002-01-01 | Sim4 clustering to Release 2 |
CG2444 | 2002-05-18 | Blastp of sequenced clone |
CG2444 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2444 | 2008-04-29 | Release 5.5 accounting |
CG2444 | 2008-08-15 | Release 5.9 accounting |
CG2444 | 2008-12-18 | 5.12 accounting |
651 bp (651 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118977
> LP01642.complete CCAGCATCCCAGTTGATAACACCTCGCTCGATCCCAGAGTTTCCACCAGA GATTACCCAAAACGAAATCCAGTATCGAGCAGTATGTCGCAGTTTAGCAC CGTTGCCGCATTCCTACTCCTCGGCCTGGTCGTCATCCTTGGCGGCCACG TTGGCCAGGCGGCCGTTGCCAAGGTCAAACTGAACAATTCATCGCATCCC GGCAAGTGTGTGCTGGACACGAACACGATCCTGTCGCCCGGGGAGACGGG TCTGGCGCCGGATCTGCCATGCGTGCGGGCCGAATGCCATGCGGATGGCT TGGTGACCTTCAAAACCTGCGATGCAGTCGCTCCGCCACCGGGCTGCAAG CAGCGCGACTTTGTGAACATCAATCGCGAATTTCCCGCTTGCTGCGAGCG GAAATACAATTGCGACAAGCACATCTAACATCTTAAGCCATTATTAATTG CCATAATCCTTAAGTTGCTCAACTAACTAGGAGGCAATGGGCAATGGATT TGTTTTCAGCTTATTATTTCGTTCTTTTTTTTTTTTTTTGTTTGTTTTTA TTTATTGTGTATACTACAACATAACAATTAAAATGTAAACGCTTAGCAAT ACAATTAAATAATTTAATAGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2444-RA | 819 | CG2444-RA | 185..809 | 1..625 | 3125 | 100 | Plus |
PhKgamma.d | 2747 | PhKgamma.d | 2645..2747 | 625..523 | 515 | 100 | Minus |
PhKgamma-RB | 2427 | PhKgamma-RB | 2342..2427 | 625..540 | 430 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 1297..1386 | 617..521 | 134 | 66 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 11596020..11596211 | 1..192 | 100 | Minus | |
chrX | 11595509..11595576 | 557..624 | 100 | == | Minus |
chrX | 11595636..11595941 | 193..498 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2444-RA | 1..345 | 84..428 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2444-RA | 1..345 | 84..428 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2444-RA | 1..345 | 84..428 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2444-RA | 1..345 | 84..428 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2444-RA | 1..345 | 84..428 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2444-RA | 1..624 | 1..624 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2444-RA | 1..624 | 1..624 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2444-RA | 15..638 | 1..624 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2444-RA | 1..624 | 1..624 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2444-RA | 15..638 | 1..624 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11704820..11705011 | 1..192 | 100 | Minus | |
X | 11704310..11704741 | 193..624 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11704820..11705011 | 1..192 | 100 | Minus | |
X | 11704310..11704741 | 193..624 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11704820..11705011 | 1..192 | 100 | Minus | |
X | 11704310..11704741 | 193..624 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 11598343..11598774 | 193..624 | 100 | <- | Minus |
arm_X | 11598853..11599044 | 1..192 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11712408..11712839 | 193..624 | 100 | <- | Minus |
X | 11712918..11713109 | 1..192 | 100 | Minus |
Translation from 2 to 427
> LP01642.hyp SIPVDNTSLDPRVSTRDYPKRNPVSSSMSQFSTVAAFLLLGLVVILGGHV GQAAVAKVKLNNSSHPGKCVLDTNTILSPGETGLAPDLPCVRAECHADGL VTFKTCDAVAPPPGCKQRDFVNINREFPACCERKYNCDKHI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2444-PB | 114 | CG2444-PB | 1..114 | 28..141 | 616 | 100 | Plus |
CG2444-PA | 114 | CG2444-PA | 1..114 | 28..141 | 616 | 100 | Plus |
CG34178-PC | 112 | CG34178-PC | 8..112 | 37..138 | 146 | 32.4 | Plus |
CG34178-PB | 112 | CG34178-PB | 8..112 | 37..138 | 146 | 32.4 | Plus |
CG34178-PA | 112 | CG34178-PA | 8..112 | 37..138 | 146 | 32.4 | Plus |
Translation from 83 to 427
> LP01642.pep MSQFSTVAAFLLLGLVVILGGHVGQAAVAKVKLNNSSHPGKCVLDTNTIL SPGETGLAPDLPCVRAECHADGLVTFKTCDAVAPPPGCKQRDFVNINREF PACCERKYNCDKHI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21439-PA | 114 | GF21439-PA | 1..114 | 1..114 | 379 | 60.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18842-PA | 113 | GG18842-PA | 1..113 | 1..114 | 477 | 80.7 | Plus |
Dere\GG25002-PA | 107 | GG25002-PA | 5..107 | 8..111 | 143 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24561-PA | 114 | GH24561-PA | 1..114 | 1..114 | 323 | 54.8 | Plus |
Dgri\GH10127-PA | 109 | GH10127-PA | 23..109 | 25..112 | 152 | 35.2 | Plus |
Dgri\GH11662-PA | 111 | GH11662-PA | 11..104 | 7..110 | 151 | 37.5 | Plus |
Dgri\GH10126-PA | 193 | GH10126-PA | 115..193 | 37..112 | 141 | 39.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2444-PB | 114 | CG2444-PB | 1..114 | 1..114 | 616 | 100 | Plus |
CG2444-PA | 114 | CG2444-PA | 1..114 | 1..114 | 616 | 100 | Plus |
CG34178-PC | 112 | CG34178-PC | 8..112 | 10..111 | 146 | 32.4 | Plus |
CG34178-PB | 112 | CG34178-PB | 8..112 | 10..111 | 146 | 32.4 | Plus |
CG34178-PA | 112 | CG34178-PA | 8..112 | 10..111 | 146 | 32.4 | Plus |
CG34215-PA | 104 | CG34215-PA | 6..100 | 11..107 | 136 | 32 | Plus |
CG34177-PA | 107 | CG34177-PA | 33..107 | 37..111 | 136 | 30.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16321-PA | 114 | GI16321-PA | 1..114 | 1..114 | 261 | 43.9 | Plus |
Dmoj\GI22128-PA | 112 | GI22128-PA | 25..107 | 25..107 | 162 | 37.3 | Plus |
Dmoj\GI22106-PA | 175 | GI22106-PA | 93..170 | 37..114 | 154 | 34.6 | Plus |
Dmoj\GI22117-PA | 109 | GI22117-PA | 30..108 | 35..110 | 134 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15237-PA | 112 | GL15237-PA | 1..108 | 1..110 | 323 | 56.4 | Plus |
Dper\GL15154-PA | 187 | GL15154-PA | 84..187 | 11..111 | 148 | 30.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15367-PA | 112 | GA15367-PA | 1..108 | 1..110 | 326 | 57.3 | Plus |
Dpse\GA25544-PA | 187 | GA25544-PA | 86..187 | 15..111 | 147 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13054-PA | 114 | GM13054-PA | 1..114 | 1..114 | 492 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15980-PA | 114 | GD15980-PA | 1..114 | 1..114 | 495 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15661-PA | 122 | GJ15661-PA | 10..122 | 1..114 | 295 | 49.1 | Plus |
Dvir\GJ19996-PA | 111 | GJ19996-PA | 24..111 | 25..112 | 179 | 40.9 | Plus |
Dvir\GJ17737-PA | 111 | GJ17737-PA | 9..104 | 12..110 | 160 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19793-PA | 115 | GK19793-PA | 3..115 | 5..114 | 298 | 50.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17607-PA | 115 | GE17607-PA | 19..115 | 18..114 | 461 | 87.6 | Plus |