Clone LP01766 Report

Search the DGRC for LP01766

Clone and Library Details

Library:LP
Tissue Source:Drosophila melanogaster larval-early pupal
Created by:Ling Hong
Date Registered:1998-06-11
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:17
Well:66
Vector:pOT2
Associated Gene/TranscriptCG16926-RA
Protein status:LP01766.pep: gold
Preliminary Size:993
Sequenced Size:877

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG16926 2001-01-01 Release 2 assignment
CG16926 2001-10-10 Blastp of sequenced clone
CG16926 2003-01-01 Sim4 clustering to Release 3
CG16926 2008-04-29 Release 5.5 accounting
CG16926 2008-08-15 Release 5.9 accounting
CG16926 2008-12-18 5.12 accounting

Clone Sequence Records

LP01766.complete Sequence

877 bp (877 high quality bases) assembled on 2001-10-10

GenBank Submission: AY061537

> LP01766.complete
CTGAGTGTTCATCTCCGAGTAGCAGACATAGACAATCGCAGACAATCGAG
CAAATCCCAGAAAAAACGACAGGCATCAAATGCCAAATCCATCGTGCAAA
GCTAACCATTCCAATTGGCCTAATCTGATTCATAGTTGAAATTGTGATAA
AAAACAAAAACCAAAGAAACTGGGACACATTTCGATCTAAGCGAAATATC
CCCTATCCCACAAACTTTTTCCGGACTTTCAGTTTGGCCTTTGAATGCTG
CTGCAGCAGTGCGGAAAAATCATCAATCTCGATCAGCATTTCACCGAGTG
CTGGAATACAAGCCCATTGCGAAACTTTGACTTCATCATCTCCCTTCTGA
GCGTTATTTCCCTAAGTGTTGTTAAGATGGCCGCCATTCCACAAGGTGCA
TTCGCAGCCTGCAAGATTCGCGAGCAATTCAACGAACGTGAGCTGATCAT
CGCCCGTCTGAGGTCCGCTGCCGCAGATAAGGGTTCCGTTGACAACGGGA
ACGCCCTAACCCAACGCGAGTACTCGCCCAACAAGTACAACGACAAGCTG
ATGAACTCCATCTGGGGATTGTACAATCGCTATTCCCCCCACAATGTGAA
GAAGAACGAGTACGCCCCCACCAAGTGATGACCTAAAGTGGGGCCACGTT
CGCTTCCAGCTGACGTGCCCCAAACGCGACTAGCATCCCCACCAGGATGT
TGGTCAAAATCAATTATATATTATATATACACAACTATAATCTCAAGCAT
ATATCGATTTAAACGCACATAACACTTTGGTAACAAATATCTATTTAATG
CTGTAATGTTTTGTAAAATTCAATAAATACTTATGATATTGTATGTAAAG
GGACAAGAAAAAAAAAAAAAAAAAAAA

LP01766.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:11:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG16926-RA 1115 CG16926-RA 222..1079 1..858 4290 100 Plus
CG15120-RA 1069 CG15120-RA 990..1069 858..779 400 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:17:37
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 15388119..15388485 368..1 1775 99.5 Minus
chr2R 21145070 chr2R 15387484..15387828 857..513 1680 99.1 Minus
chr2R 21145070 chr2R 15387905..15388049 512..368 725 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:46:26 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:17:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19500929..19501296 368..1 1840 100 Minus
2R 25286936 2R 19500294..19500639 858..513 1730 100 Minus
2R 25286936 2R 19500716..19500860 512..368 725 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:35:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 19502128..19502495 368..1 1840 100 Minus
2R 25260384 2R 19501493..19501838 858..513 1730 100 Minus
2R 25260384 2R 19501915..19502059 512..368 725 100 Minus
Blast to na_te.dros performed 2019-03-15 19:17:36
Subject Length Description Subject Range Query Range Score Percent Strand
S2 1735 S2 S2 1735bp 1582..1708 833..704 137 61.4 Minus

LP01766.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:18:24 Download gff for LP01766.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 15387484..15387828 513..857 99 <- Minus
chr2R 15387905..15388048 369..512 100 <- Minus
chr2R 15388119..15388485 1..368 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:33:21 Download gff for LP01766.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 1..384 245..628 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:50:08 Download gff for LP01766.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 1..384 245..628 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:47:41 Download gff for LP01766.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 1..384 245..628 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:19:03 Download gff for LP01766.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 1..384 245..628 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:15:01 Download gff for LP01766.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 1..384 245..628 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:34:44 Download gff for LP01766.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 1..857 1..857 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:50:08 Download gff for LP01766.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 1..857 1..857 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:47:41 Download gff for LP01766.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 28..884 1..857 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:19:04 Download gff for LP01766.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 1..857 1..857 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:15:01 Download gff for LP01766.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 28..884 1..857 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:18:24 Download gff for LP01766.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19500929..19501296 1..368 100   Minus
2R 19500295..19500639 513..857 100 <- Minus
2R 19500716..19500859 369..512 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:18:24 Download gff for LP01766.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19500929..19501296 1..368 100   Minus
2R 19500295..19500639 513..857 100 <- Minus
2R 19500716..19500859 369..512 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:18:24 Download gff for LP01766.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19500929..19501296 1..368 100   Minus
2R 19500295..19500639 513..857 100 <- Minus
2R 19500716..19500859 369..512 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:47:41 Download gff for LP01766.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15388221..15388364 369..512 100 <- Minus
arm_2R 15387800..15388144 513..857 100 <- Minus
arm_2R 15388434..15388801 1..368 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:55:51 Download gff for LP01766.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19501494..19501838 513..857 100 <- Minus
2R 19501915..19502058 369..512 100 <- Minus
2R 19502128..19502495 1..368 100   Minus

LP01766.pep Sequence

Translation from 244 to 627

> LP01766.pep
MLLQQCGKIINLDQHFTECWNTSPLRNFDFIISLLSVISLSVVKMAAIPQ
GAFAACKIREQFNERELIIARLRSAAADKGSVDNGNALTQREYSPNKYND
KLMNSIWGLYNRYSPHNVKKNEYAPTK*

LP01766.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:17:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13178-PA 126 GF13178-PA 1..126 1..127 499 77.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:17:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20901-PA 126 GG20901-PA 1..126 1..127 613 91.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:17:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22771-PA 127 GH22771-PA 35..126 31..127 327 66 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:37:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG16926-PB 127 CG16926-PB 1..127 1..127 664 100 Plus
CG16926-PA 127 CG16926-PA 1..127 1..127 664 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:17:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20568-PA 79 GI20568-PA 2..78 47..127 303 72 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:17:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21299-PA 124 GL21299-PA 1..124 1..127 464 69.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:17:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24253-PA 124 GA24253-PA 1..124 1..127 464 69.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:17:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19824-PA 127 GM19824-PA 1..127 1..127 661 96.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:17:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25316-PA 126 GD25316-PA 1..126 1..127 649 96.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:17:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21418-PA 124 GJ21418-PA 43..123 42..127 307 73.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:17:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15702-PA 127 GK15702-PA 1..126 1..127 386 57.3 Plus
Dwil\GK24044-PA 146 GK24044-PA 1..113 1..114 288 49.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:17:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13840-PA 126 GE13840-PA 1..126 1..127 638 95.3 Plus

LP01766.hyp Sequence

Translation from 244 to 627

> LP01766.hyp
MLLQQCGKIINLDQHFTECWNTSPLRNFDFIISLLSVISLSVVKMAAIPQ
GAFAACKIREQFNERELIIARLRSAAADKGSVDNGNALTQREYSPNKYND
KLMNSIWGLYNRYSPHNVKKNEYAPTK*

LP01766.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:04:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG16926-PB 127 CG16926-PB 1..127 1..127 664 100 Plus
CG16926-PA 127 CG16926-PA 1..127 1..127 664 100 Plus