BDGP Sequence Production Resources |
Search the DGRC for LP01967
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 19 |
Well: | 67 |
Vector: | pOT2 |
Associated Gene/Transcript | Tgt-RA |
Protein status: | LP01967.pep: gold |
Preliminary Size: | 1614 |
Sequenced Size: | 1561 |
Gene | Date | Evidence |
---|---|---|
CG4947 | 2001-01-01 | Release 2 assignment |
CG4947 | 2001-07-04 | Blastp of sequenced clone |
CG4947 | 2003-01-01 | Sim4 clustering to Release 3 |
Tgt | 2008-04-29 | Release 5.5 accounting |
Tgt | 2008-08-15 | Release 5.9 accounting |
Tgt | 2008-12-18 | 5.12 accounting |
1561 bp (1561 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052033
> LP01967.complete ATTGAAACGTGCACCGCCGGCGTATTGCGCGTAAACATAAGACATTTCAC GGGGAATTTTCTGGACTTTGCTAACTCAATGGGTCCCAGCCACATTCCTC CGCTGACCTACAAGGTCGTGGCCGAGTGCTCCGTCTCCAAAGCCCGGGCG GGACTGATGACCCTAAGGCACAGCGAGGTAAACACCCCGGTCTTTATGCC CGTGGGCACTCAGGGAACCTTGAAGGGCATCGTGCCGGACCAGCTCATCG AGCTGAACTGCCAGATTCTGCTGGGGAACACCTATCACCTGGGCCTGAGG CCCGGAATCGAGACACTGAAGAAAGCCGGTGGTCTGCACAAGTTTATGGG CTGGCCCAGGGCCATTCTAACAGATTCCGGTGGCTTTCAGATGGTTTCCC TGCTGCAGCTGGCCGAGATCGATGAGCACGGTGTGAACTTCCGGTCGCCC TTTGACAACAGCCAGTGCATGCTGACGCCGGAGCACTCCATCGAAATCCA GAACGCCATTGGTGGGGATATTATGATGCAGCTGGATGATGTGGTCAAGA CCACAACAACTGGCCCCCGGGTGGAGGAGGCCATGGAGCGGACTATTCGC TGGGTGGATCGCTGCATAGAGGCCCATGCCCGCGACGATGACCAGTCGCT GTTCCCCATCGTCCAGGGAGGATTGGATGTGCCGCTGCGTCAGCGTTGCG TTTCCGCTCTCATGGAGCGCCAGGTTCGAGGCTTCGCCGTGGGCGGGCTA AGTGGTGGCGAGAGCAAGCACGACTTCTGGCGTATGGTGGACGTGTGCAC TGGCTATCTGCCCAAGGACAAGCCGCGCTACCTGATGGGCGTGGGTTTTG CGGCGGATCTGGTGGTCTGCGTGGCCCTGGGCATCGATATGTTCGACTGT GTCTTCCCCACCCGGACAGCTCGATTTGGTTGCGCCCTGGTGGACAGTGG GCAGCTGAACCTGAAGCAGCCCAAGTACAAACTGGACATGGAGCCCATTG ACAAGGACTGCGACTGCAGCACGTGTAGGCGTTACACACGCTCGTACCTG CACCACATCGCCACCAACGAGAGTGTCTCCAGCTCCCTGTTGAGCATACA CAACGTGGCCTACCAGCTCAGGCTGATGAGGAGCATGCGGGAGGCCATTC AGCGCGATGAGTTCCCCCAGTTCGTCGCGGACTTTATGGCGAGACACTTC AAGGCGGAACCTGTTCCGGCTTGGATACGAGAAGCTCTGTCTGCCGTAAA CATCCAGCTGCCTGCGGATCCGGAGAGGATTGATGAGCAGGACCAGAAGC CAAAGACCGAAAAGAGACGGGAAACAGAGGACGTGGCGGAGGAGCAGGTG GCCTCCAGCTAACATCATCACATAGCAACCTTTGTGTTTTGATAACCCAA AGTTCCGACTAAGAGGCATTTCTTAATTGACACATACGTTCATGTATTTT ACATGTCAAATGTCATGTAAGTTATTTTCATAAGAATAAATACTTAATTA GACATAGAATAAAAAAGGAAAAATAAATTACATCATAAAATTCAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tgt-RA | 1576 | Tgt-RA | 31..1575 | 1..1545 | 7725 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 1184038..1184204 | 1..167 | 100 | -> | Plus |
chr2L | 1184273..1185648 | 168..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tgt-RA | 1..1284 | 79..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tgt-RA | 1..1284 | 79..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tgt-RA | 1..1284 | 79..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tgt-RA | 1..1284 | 79..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tgt-RA | 1..1284 | 79..1362 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tgt-RA | 1..1543 | 1..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tgt-RA | 1..1543 | 1..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tgt-RA | 24..1566 | 1..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tgt-RA | 1..1543 | 1..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tgt-RA | 24..1566 | 1..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1184088..1184254 | 1..167 | 100 | -> | Plus |
2L | 1184323..1185698 | 168..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1184088..1184254 | 1..167 | 100 | -> | Plus |
2L | 1184323..1185698 | 168..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1184088..1184254 | 1..167 | 100 | -> | Plus |
2L | 1184323..1185698 | 168..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 1184088..1184254 | 1..167 | 100 | -> | Plus |
arm_2L | 1184323..1185698 | 168..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1184088..1184254 | 1..167 | 100 | -> | Plus |
2L | 1184323..1185698 | 168..1543 | 100 | Plus |
Translation from 0 to 1361
> LP01967.hyp IETCTAGVLRVNIRHFTGNFLDFANSMGPSHIPPLTYKVVAECSVSKARA GLMTLRHSEVNTPVFMPVGTQGTLKGIVPDQLIELNCQILLGNTYHLGLR PGIETLKKAGGLHKFMGWPRAILTDSGGFQMVSLLQLAEIDEHGVNFRSP FDNSQCMLTPEHSIEIQNAIGGDIMMQLDDVVKTTTTGPRVEEAMERTIR WVDRCIEAHARDDDQSLFPIVQGGLDVPLRQRCVSALMERQVRGFAVGGL SGGESKHDFWRMVDVCTGYLPKDKPRYLMGVGFAADLVVCVALGIDMFDC VFPTRTARFGCALVDSGQLNLKQPKYKLDMEPIDKDCDCSTCRRYTRSYL HHIATNESVSSSLLSIHNVAYQLRLMRSMREAIQRDEFPQFVADFMARHF KAEPVPAWIREALSAVNIQLPADPERIDEQDQKPKTEKRRETEDVAEEQV ASS*
Translation from 78 to 1361
> LP01967.pep MGPSHIPPLTYKVVAECSVSKARAGLMTLRHSEVNTPVFMPVGTQGTLKG IVPDQLIELNCQILLGNTYHLGLRPGIETLKKAGGLHKFMGWPRAILTDS GGFQMVSLLQLAEIDEHGVNFRSPFDNSQCMLTPEHSIEIQNAIGGDIMM QLDDVVKTTTTGPRVEEAMERTIRWVDRCIEAHARDDDQSLFPIVQGGLD VPLRQRCVSALMERQVRGFAVGGLSGGESKHDFWRMVDVCTGYLPKDKPR YLMGVGFAADLVVCVALGIDMFDCVFPTRTARFGCALVDSGQLNLKQPKY KLDMEPIDKDCDCSTCRRYTRSYLHHIATNESVSSSLLSIHNVAYQLRLM RSMREAIQRDEFPQFVADFMARHFKAEPVPAWIREALSAVNIQLPADPER IDEQDQKPKTEKRRETEDVAEEQVASS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15174-PA | 420 | GF15174-PA | 1..418 | 1..417 | 2069 | 90.9 | Plus |
Dana\GF24662-PA | 417 | GF24662-PA | 4..377 | 13..363 | 244 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24778-PA | 428 | GG24778-PA | 1..428 | 1..427 | 2195 | 94.9 | Plus |
Dere\GG14034-PA | 418 | GG14034-PA | 128..381 | 132..366 | 214 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11403-PA | 412 | GH11403-PA | 3..408 | 4..409 | 1896 | 85.2 | Plus |
Dgri\GH16210-PA | 419 | GH16210-PA | 126..393 | 132..377 | 201 | 24.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tgt-PA | 427 | CG4947-PA | 1..427 | 1..427 | 2245 | 100 | Plus |
CG3434-PA | 418 | CG3434-PA | 128..379 | 132..364 | 202 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14537-PA | 406 | GI14537-PA | 1..399 | 1..399 | 1954 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15624-PA | 429 | GL15624-PA | 1..414 | 1..417 | 2018 | 88.7 | Plus |
Dper\GL17966-PA | 417 | GL17966-PA | 127..380 | 132..366 | 241 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18546-PA | 429 | GA18546-PA | 1..414 | 1..417 | 2017 | 88.7 | Plus |
Dpse\GA17450-PA | 417 | GA17450-PA | 127..380 | 132..366 | 243 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16805-PA | 427 | GM16805-PA | 1..427 | 1..427 | 2232 | 96.7 | Plus |
Dsec\GM24868-PA | 418 | GM24868-PA | 128..381 | 132..366 | 222 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23082-PA | 382 | GD23082-PA | 1..382 | 1..427 | 1875 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16961-PA | 406 | GJ16961-PA | 1..397 | 1..397 | 1938 | 89.2 | Plus |
Dvir\GJ13186-PA | 417 | GJ13186-PA | 152..391 | 160..377 | 223 | 26.2 | Plus |