Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
LP02089.complete Sequence
1192 bp (1192 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118984
> LP02089.complete
ATTGCTCGTGATAAATCTCCCATAGCGATGGAGTCGAGGGTCACCAGCGG
CACAGGTCCACCGAACACCATTATGATCCAGCTGGTGTCCCAACAGCCCA
GTTCCTGTGGACAGATGCAGGCCATGCCCATTTCGGTGCAGACGATACCC
TTGTTCCCCAATTCCAGAACATCGACAGAGCGACCTTGTCGATCGGTCTC
CATTGCCCCGAATGTAAGACCTCCAACGGATGTCCCTCCTCCTCGAAGGA
ATTTAAGAATCCGACCCGAGGAATATGCGACACCCAAGCGGAAGAATTCG
CAAAGCCAGTTTCGTCATTTCTCCCGCAGCATAAACCAACCTCCACCGGT
GTACTATGTTCTTCGACCAGAAGACCGTATTATGCCCATCTACATACCAC
CTCCGAGGTTTAACAATGAGCAAGGATCAAGGATGGCGACGGAGTGTCCT
TGCTGTGGCCATGCCAAGTCATTGAACCCGGAGGAACCTCTAAGAGTCCA
CGTAGCGCAGAAAGAGTTTGTCAAATTAGAGAAGGCAACTCCTGGACATC
GGGATCAATGTACTAACACCATTGACCAGCCAGATGTGGGAAATATAAGG
ACGATTTACGAAACATTGGGACGCGCAATGGTCACTGCAGCCGTGGAGGC
AGCCCAGAGATCCCAGCCAGCAGGACCCTCAGATCCGACAAATGTAATAT
TGAAACTATTAACCCAATTGGGGGAGCAGAATCAAACAACAGGCTTGAGT
CCACATTCAGAAGCAGTAGCAGAAAGTCCCGACCACCAACCACATATGCG
CAGGCCCAAAGCTAGCTTTACGGAAGCAGTCCGCATGATGGAGAGGACCT
CGTCTGATCCTTCCATTGCTAAAGGGCCACCAGATGAGCTAGATGACCAA
CGTAGGCTTCCATCTGTACTCTCCGATGGTCGTCTTCGCGTCGAATATCC
GAAAACGCCTAGACCAACACCAACATACTCCGTCGAATCTGAAAACACCC
TCAGTAATCATATGTCCTCGGAGAGATTAAGACTCGATTCTGGTTCCTCG
CCAAACCTGGGAAACTCCATTGGACATAGCCAAGCGTAGCAATGAAATGA
TCTTCACCGAAGTACCCTAGATCAGAATATAAATTATCTTCCACATGACC
ATAAATAAACTGCGTTGAAGCTTTAAAAAAAAAAAAAAAAAA
LP02089.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:02:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13385-RA | 1174 | CG13385-RA | 1..1174 | 1..1174 | 5870 | 100 | Plus |
CG13385.a | 1250 | CG13385.a | 70..1220 | 26..1176 | 5755 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:15:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 8395623..8396796 | 1..1174 | 5840 | 99.8 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:46:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:15:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8396713..8397888 | 1..1176 | 5880 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:34:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8396713..8397888 | 1..1176 | 5880 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 12:15:58 has no hits.
LP02089.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:17:02 Download gff for
LP02089.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 8395623..8396796 | 1..1174 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:33:36 Download gff for
LP02089.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-RA | 1..1062 | 28..1089 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:43:38 Download gff for
LP02089.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-RA | 1..1062 | 28..1089 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:04:36 Download gff for
LP02089.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-RA | 1..1062 | 28..1089 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:35:48 Download gff for
LP02089.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-RA | 1..1062 | 28..1089 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:40:47 Download gff for
LP02089.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-RA | 1..1062 | 28..1089 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:18:16 Download gff for
LP02089.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-RA | 1..1174 | 1..1174 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:43:38 Download gff for
LP02089.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-RA | 1..1174 | 1..1174 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:04:36 Download gff for
LP02089.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-RA | 1..1174 | 1..1174 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:35:48 Download gff for
LP02089.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-RA | 1..1174 | 1..1174 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:40:47 Download gff for
LP02089.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13385-RA | 65..1238 | 1..1174 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:17:02 Download gff for
LP02089.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8396713..8397886 | 1..1174 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:17:02 Download gff for
LP02089.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8396713..8397886 | 1..1174 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:17:02 Download gff for
LP02089.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8396713..8397886 | 1..1174 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:04:36 Download gff for
LP02089.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8396713..8397886 | 1..1174 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:08:11 Download gff for
LP02089.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8396713..8397886 | 1..1174 | 100 | | Plus |
LP02089.hyp Sequence
Translation from 0 to 1088
> LP02089.hyp
IARDKSPIAMESRVTSGTGPPNTIMIQLVSQQPSSCGQMQAMPISVQTIP
LFPNSRTSTERPCRSVSIAPNVRPPTDVPPPRRNLRIRPEEYATPKRKNS
QSQFRHFSRSINQPPPVYYVLRPEDRIMPIYIPPPRFNNEQGSRMATECP
CCGHAKSLNPEEPLRVHVAQKEFVKLEKATPGHRDQCTNTIDQPDVGNIR
TIYETLGRAMVTAAVEAAQRSQPAGPSDPTNVILKLLTQLGEQNQTTGLS
PHSEAVAESPDHQPHMRRPKASFTEAVRMMERTSSDPSIAKGPPDELDDQ
RRLPSVLSDGRLRVEYPKTPRPTPTYSVESENTLSNHMSSERLRLDSGSS
PNLGNSIGHSQA*
LP02089.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:06:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13385-PA | 353 | CG13385-PA | 1..353 | 10..362 | 1857 | 100 | Plus |
LP02089.pep Sequence
Translation from 27 to 1088
> LP02089.pep
MESRVTSGTGPPNTIMIQLVSQQPSSCGQMQAMPISVQTIPLFPNSRTST
ERPCRSVSIAPNVRPPTDVPPPRRNLRIRPEEYATPKRKNSQSQFRHFSR
SINQPPPVYYVLRPEDRIMPIYIPPPRFNNEQGSRMATECPCCGHAKSLN
PEEPLRVHVAQKEFVKLEKATPGHRDQCTNTIDQPDVGNIRTIYETLGRA
MVTAAVEAAQRSQPAGPSDPTNVILKLLTQLGEQNQTTGLSPHSEAVAES
PDHQPHMRRPKASFTEAVRMMERTSSDPSIAKGPPDELDDQRRLPSVLSD
GRLRVEYPKTPRPTPTYSVESENTLSNHMSSERLRLDSGSSPNLGNSIGH
SQA*
LP02089.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:07:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG10547-PA | 347 | GG10547-PA | 1..347 | 1..353 | 1246 | 71 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:24:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13385-PA | 353 | CG13385-PA | 1..353 | 1..353 | 1857 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:07:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM16929-PA | 342 | GM16929-PA | 1..342 | 1..353 | 1568 | 85.8 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 05:07:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD23536-PA | 342 | GD23536-PA | 1..342 | 1..353 | 1572 | 86.1 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:07:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE18767-PA | 358 | GE18767-PA | 1..358 | 1..353 | 1207 | 70.8 | Plus |