BDGP Sequence Production Resources |
Search the DGRC for LP02169
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 21 |
Well: | 69 |
Vector: | pOT2 |
Associated Gene/Transcript | Socs44A-RA |
Protein status: | LP02169.pep: gold |
Preliminary Size: | 1103 |
Sequenced Size: | 1803 |
Gene | Date | Evidence |
---|---|---|
CG2160 | 2002-01-01 | Sim4 clustering to Release 2 |
CG2160 | 2002-05-18 | Blastp of sequenced clone |
CG2160 | 2003-01-01 | Sim4 clustering to Release 3 |
Socs44A | 2008-04-29 | Release 5.5 accounting |
Socs44A | 2008-08-15 | Release 5.9 accounting |
Socs44A | 2008-12-18 | 5.12 accounting |
1803 bp (1803 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118985
> LP02169.complete TCACGGCTCCGAATTAGATCAATGATGTAATTCCACCACGAGGAAGCTCC GATCCGATCCGATTCCACTCCAAAATGAGCCACGGCGACCAGAGTCAAAA CCAGAGCAGCCAGCGGAGCCAGGCGCTCACTGGCGGTGGTGACTCCCCGA GGGACAGGGAGAAGGAAAAGAAGGGCTGGTTCCACTCGCTGACCAGGCGC AAGAAGTCCGACTCGGCGCTGGCCGTGACTGCATCCGCCGCCGTCTCCAC CAGTGGATCGCAGAACAACAACAACGAAGTGTGCGTCCTTGAGGCAGCGG ACTCTTCCATGGCCAGCTGCAGCAATGGGGGCACGGGCACAGGAACTCTG CGCAGAAGGCGGGACAAGGACAAGCGAAACGTGTTTGCCAGACTACGAAG GAAGGTGGGCCAAGGGCTCAGCTCCCTGCGAAACTGGCACTCCATGGGCG ACTGCGACGACGGCGGAACTACTGATGCCACCTACGAGTTCCTTACGCCG GCCATCTGTCCGGAACCCACGCTACCATTCACACACGACTACTTGCGCTT TATCCGGAAGAAATGGCTTGAGCGCGAGGACGCCCACTCGCCCAACCAGA TCATGTACAAGGCCTGCTCCGAGATGCTCAACCAAGTGTGGTACTGGGGT GAGATCTCCAGGCGCGATTCGCAGCGGCAGTTGAGTGACAAGCCGACTGG GTCGTTTCTAGTCCGCGACTCGGAAACCAGCGGATCCCAATTCACGCTCA GCTTTCGGATTGTGAACGTAACCCTGCATTATCGACTGGAATATCGCGAC AATTTTTGGCACTTCGAGGAACTTAAGTACGAGTCCATTGTCGAGATGAT CGAAGATATCTTGCACCGCTGCACCAACGACAACTTTGTGTGCTTTGTGA AGGTTCCCAACGAGATGCAGCCACCGTTTCCAGTGATCCTCAAGTACCCG TTGAGCCGGTACTCCAACATGCCCAAGCTGCAGGACTTATGCCGCCGTGT TCTGCAGCGCCAGATGTCTCGCGAACAGCTGGCCCAGTTGCCAGTGCCGG CGCAGATGCTGGAGTACTTGTCGGTGGAGCGGGAGCTGGTCTTCCAGAGT TAGGCAACCGCCGCCCGCCGTCGAGAAGCCGCTGGTCAAAGCTTTAACAC TGAAGTAAACGCAAGCGCGTACACCAAAGAGGTCCGGGCGAATGGAATCC CAGCCTGCAGTTGTTCGTAATGATATTTGTTGGTCGGATTGGCAATATGT TGTTGATGCATTTCTACGCCCCAGTAACTAAGCGCACAGTCTCTCTTCAC GTGCACGCCGGAATCCCAGTGCACAGAATTTTACTGTATTGTACTGCTAA GTACGGTTAGTACTAGTATCTTGTCTAGGATAATGTATTATGTTATTTGC CATATTTAGTCTATTGGTTTGTTTTATATGGGTCCTGGTCAAGTCTATAC TCTGCACCACAGTGTGCAAATCCTTAAGCAAATTTTTAAACATTGAACTA CTGCATATATGTATTAACGTAAGTTCTAAGCCAGATGTATCGTACTATTT ACGTTGTTTGCATTTTTGTATTCCTAACTTGGACACTAACTTTTTGCTAA TCTAGATTGCATGGAATTTAGGCAGCTTTACGGCAATCGAATACGTTCAA TGCCAATTACTCTTGTTGCAACGTGTATGTATTTTATTTAAATCTATCTA TGAATATTTTACAAGAACAAAATATCAATCAACTCCTTGAGCGATCTTGC AGTCAAAGGAGCTCGCAAATAAAGAAAAAATCACAAAAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Socs44A-RA | 1930 | Socs44A-RA | 147..1930 | 1..1784 | 8920 | 100 | Plus |
Pbp49-RB | 1896 | Pbp49-RB | 1769..1896 | 1789..1662 | 625 | 99.2 | Minus |
CG42516-RB | 1896 | CG42516-RB | 1769..1896 | 1789..1662 | 625 | 99.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Doc | 4725 | Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). | 1689..1752 | 1101..1038 | 113 | 64.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4015120..4015750 | 1..631 | 100 | -> | Plus |
chr2R | 4015813..4016965 | 632..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Socs44A-RA | 1..1029 | 75..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Socs44A-RA | 1..1029 | 75..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Socs44A-RA | 1..1029 | 75..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Socs44A-RA | 1..1029 | 75..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Socs44A-RA | 1..1029 | 75..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Socs44A-RA | 1..1784 | 1..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Socs44A-RA | 1..1784 | 1..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Socs44A-RA | 57..1840 | 1..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Socs44A-RA | 1..1784 | 1..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Socs44A-RA | 57..1840 | 1..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8127631..8128261 | 1..631 | 100 | -> | Plus |
2R | 8128324..8129476 | 632..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8127631..8128261 | 1..631 | 100 | -> | Plus |
2R | 8128324..8129476 | 632..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8127631..8128261 | 1..631 | 100 | -> | Plus |
2R | 8128324..8129476 | 632..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4015136..4015766 | 1..631 | 100 | -> | Plus |
arm_2R | 4015829..4016981 | 632..1784 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8129523..8130675 | 632..1784 | 100 | Plus | |
2R | 8128830..8129460 | 1..631 | 100 | -> | Plus |
Translation from 74 to 1102
> LP02169.pep MSHGDQSQNQSSQRSQALTGGGDSPRDREKEKKGWFHSLTRRKKSDSALA VTASAAVSTSGSQNNNNEVCVLEAADSSMASCSNGGTGTGTLRRRRDKDK RNVFARLRRKVGQGLSSLRNWHSMGDCDDGGTTDATYEFLTPAICPEPTL PFTHDYLRFIRKKWLEREDAHSPNQIMYKACSEMLNQVWYWGEISRRDSQ RQLSDKPTGSFLVRDSETSGSQFTLSFRIVNVTLHYRLEYRDNFWHFEEL KYESIVEMIEDILHRCTNDNFVCFVKVPNEMQPPFPVILKYPLSRYSNMP KLQDLCRRVLQRQMSREQLAQLPVPAQMLEYLSVERELVFQS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13665-PA | 340 | GF13665-PA | 1..340 | 1..342 | 1390 | 83.5 | Plus |
Dana\GF19453-PA | 1086 | GF19453-PA | 895..1062 | 170..333 | 229 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23337-PA | 340 | GG23337-PA | 1..340 | 1..342 | 1789 | 96.8 | Plus |
Dere\GG18161-PA | 1021 | GG18161-PA | 850..997 | 189..333 | 227 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21907-PA | 383 | GH21907-PA | 37..383 | 6..342 | 1280 | 72.1 | Plus |
Dgri\GH24784-PA | 1068 | GH24784-PA | 877..1043 | 170..332 | 232 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Socs44A-PA | 342 | CG2160-PA | 1..342 | 1..342 | 1810 | 100 | Plus |
Socs16D-PB | 1021 | CG8146-PB | 783..997 | 129..333 | 227 | 30.1 | Plus |
Socs16D-PA | 1016 | CG8146-PA | 845..992 | 189..333 | 225 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19258-PA | 388 | GI19258-PA | 41..388 | 6..342 | 1205 | 70.3 | Plus |
Dmoj\GI14684-PA | 608 | GI14684-PA | 377..581 | 132..332 | 242 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17106-PA | 348 | GL17106-PA | 1..348 | 1..342 | 1360 | 76.1 | Plus |
Dper\GL14567-PA | 1099 | GL14567-PA | 928..1075 | 189..333 | 228 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15275-PA | 348 | GA15275-PA | 1..348 | 1..342 | 1361 | 75.5 | Plus |
Dpse\GA20849-PA | 1101 | GA20849-PA | 930..1077 | 189..333 | 228 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21010-PA | 340 | GM21010-PA | 1..340 | 1..342 | 1804 | 97.7 | Plus |
Dsec\GM22852-PA | 1026 | GM22852-PA | 855..1002 | 189..333 | 227 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10544-PA | 340 | GD10544-PA | 1..340 | 1..342 | 1812 | 98.2 | Plus |
Dsim\GD15367-PA | 201 | GD15367-PA | 1..182 | 1..188 | 685 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22133-PA | 382 | GJ22133-PA | 43..382 | 11..342 | 1234 | 73 | Plus |
Dvir\GJ16590-PA | 1091 | GJ16590-PA | 862..1067 | 132..333 | 239 | 29 | Plus |
Translation from 74 to 1102
> LP02169.hyp MSHGDQSQNQSSQRSQALTGGGDSPRDREKEKKGWFHSLTRRKKSDSALA VTASAAVSTSGSQNNNNEVCVLEAADSSMASCSNGGTGTGTLRRRRDKDK RNVFARLRRKVGQGLSSLRNWHSMGDCDDGGTTDATYEFLTPAICPEPTL PFTHDYLRFIRKKWLEREDAHSPNQIMYKACSEMLNQVWYWGEISRRDSQ RQLSDKPTGSFLVRDSETSGSQFTLSFRIVNVTLHYRLEYRDNFWHFEEL KYESIVEMIEDILHRCTNDNFVCFVKVPNEMQPPFPVILKYPLSRYSNMP KLQDLCRRVLQRQMSREQLAQLPVPAQMLEYLSVERELVFQS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Socs44A-PA | 342 | CG2160-PA | 1..342 | 1..342 | 1810 | 100 | Plus |
Socs16D-PB | 1021 | CG8146-PB | 783..997 | 129..333 | 227 | 30.1 | Plus |
Socs16D-PA | 1016 | CG8146-PA | 845..992 | 189..333 | 225 | 34.2 | Plus |