LP02193.complete Sequence
4583 bp (4583 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118598
> LP02193.complete
CGCAACAGCCGGAAAGTCGCGCTCGCTTCTTGGCTCCGGCGGTGAACAGT
TCGCCCGCGAGCGAAAAGGTGTCAACGTAGTCAGAACGCAGTGGAAAACC
GGATGCAAGACCGAAATCGCAAACTGTTAATTTCTAAGGCAAAACGCCGT
GTGGTGTGCAGTTGGTGGATATGCCAGATACAGATACAGATGACTATTCC
GATCCAGATCGCAAAGAAGCCACAATAAAGCCCGGGCGAGAAATCAAGCG
TTCGGCCGGCCAAACAACAACTAGCACTCAACGCACATTAACGCAAATCG
CCTCAAATTAACACTGAACACTAAAATCGGAATACAAAAGTGCGGATACA
ATACTATTTAGAAGCCATGAATCCGAAACCAACAACTACCAAGCTGGCCG
AAATTGAGCAGTTTTTGTTGGGTAAGCCAGGTTTTTCTCAAAGAATCGGT
CTTGGGTGTTAATAGTATAAGTAGCTATTTATCAGCACATAAAAGTGCTT
ATGAGATACTCGTATTTGTTTAAGACAACTATTTAAAAGCGGTTGGAAAG
CAGCAAAATAATCCTTGGTTTACAATAGCCAATCTCATATTTCTTCAAAA
CTTATTTTTATGATTTTTTTTTTTTTTTTTTTTTTTTTTGTTTCCATCGA
TAGTGTTCCTATCTCATAAAGAAAATTCTACTTATGGCATACCTATTTTT
CTGCGTGTAGCTAAAATCAGCAAAGCAAAATTGAAGCCAGTTAGTGTGAG
ATAGATCAACAGAAACTTTGTTAATTTCGCCAGGCAAACAGCGCCATCAA
AAAATTACACACCGACTCAAAGTTGAGAAGAGATGGAGGAGGAGGAGGCG
GAAGAGGAGGACGAGGAGGAGGAGGCGATCCAAAACATAACCATTAACAA
TAACCCAGTGCCGGAGTATTAGTATTGACTCATTCCGCAGGCGCCCGAGC
TTAATACTCTTTTGTTCTTCTTTTGGCCTGTGACCAGACCATCGGACTCT
TCTGGATATTTTAGTGGCCCTCCTCCTCTTCCTCCTCCTTCGCCTCGCGC
GTATTTCGTACACTTTATCGAGTCCCAATTGGGCTCCTCTTTGGAGCGCT
GTTCCCCCGAATCGTTTATATATATGTACATATATATATTTGTGGTTATT
TCGTTAAATCATTCTACATGTGTATGTGGACGAGAAAGACAATAAACAGC
GGATTGGACATGCCGCAGAACTAAGCCTTAAGCGCTCTTTTAGCCCATCT
TGGACCTTCCCTAGTCGGTTCCACTTTCTCGGGTCTCGGTTCAGTGGCTC
TCAGGGCATGATCAGGGGAATAGAGGAGCACGTACATATATGTATGTATA
TCCACCCTCCTCCGATGACTGTTGCTTCAATTTATATTTGTTTGTGTATG
CCTCACATTGATACATATATCGTACAAATGAGTTTCTGAGGAGTTTCCCA
ACGATCCTGATTAAGACACAATTATCAACTTAGCAGTTGGTTTCTGCAAC
ACATATTACAGCGAGACAAGCTTATTGATAACAAATATACATACTTATAA
TGTTTTATAGGATAAACTTCTTCATTATTATCCCATTTTAAATTGGTTAG
TTTGCACCTAGTAATCTTTCCTCTGCTGTAGACTTAAAGGCCAAAGTCAG
AGTGCTGATTTGGCATACAGATCAAACAAATTATACTTTTAATGCCCTTT
TCCCTAATTCATTTGGTTGGAAAGATATGCACTGTCAAGATCCCCAATTA
TCCATAGTTTGGGAGCAAAAAGTTGCCTTTGCACGAAACGTTTTAACTGA
ACGGTTAAGTTAAGTCTTGTTTCCACTTCCTTAAAAAAAAAATTATCGCT
CCTAACTATATATAATAAGAATTTGGCTTCAAGCTGAAACTATTATTTGT
CCAAGGCGTTTTTAACAATTAAATGATGGAAAGTTGCCAAAAAAAACTCC
AAGTGACCAAGCTCTTCTGGTTAAGATCTCAAATTCTTAAGGGCATTTCC
AGTTCGCATTTCGCCAGCACGACTTTTGGATATTTTTCTTATTTCCATAT
TTGGACATATTACTTTTAAGAGCAGTTCACCGGAGCTTTGCGTGCTTGAG
TTTTAACAAGATTTCGGGCAAATTTCAGCGTCTTCTGGTTTTCTGTGGAT
GTGGGCATTTCTGGACAGAGGGTGGGGTAACAGACACCAGAGTTAACTTT
CTTGGTCAGTGAAATTATTTTTAATTGCCCCGGTCAATTCGCAGTTGACT
CTTGAGCAAGAGCTTATGAGGTCACTTATGTACATGTACATGTACATACC
CACATGCGTTTGTGACCGTACTTCTGGCTGGGAACGGTAGAGCCAGTGAG
TCACGGCTGCAGAAGTCGGAGCAGAAGAGGCACCACCACTCCACTGGCCC
ACTAATTGCCCGCCCAAGAAAGCTACTCTGTTGCTCAACTGCCCCGCCAT
TAGGCTCAATGATGCGTTTAAAAATAATAGCCGATGGGGCCGCCGCCTTA
TTTAGCCAGCTGAAGAGCTTACGATCCTCCCCTCTGCTTGCTTTCAGATG
TCCGCGCCCACTTCCGAGCCTCGCTGGAGACCTCGGAGTACGAGAACACC
TCGAACCTATTCCATGTGACGGCCGCCGAGCAGACCGCCGCTCTTCTGGC
CCGCTGCGAAATCCTGCTGGCTGCAGCCAGTTCTGCATCGGGATCGGGAT
CGGGACTGGAACTGGGATCAGGGCTGGGATGCGCAGACGAGCAGGCGGCA
GCTAACCATCGTTCCAGCCTGGTCGACTGTGTCGATAGCAAGGTGGGCGC
GGAGACCGGTCCCAGCGGTTATCTGGAGATGCTTGCCTCCCCGTCACCCT
CGAAAAGCTCACTGTCCGCCTCGCGGGAGTACATTGATTTGGGCAGCAGC
GGATCCCTGGATCGTTGCTCCGTCAATCAACCGGTTCCGGCAGCGAAGGA
CAAGGAGCCACATCAGCAGCTCTACGAGATTTGCCAGGGCCAGGGAGCGG
GCCAGGACGAGGATGAGGCGCAACAGGCGATCACCTTTACCCACGAGGTG
TTCATTGACTGCCCGTATGCAGATCTGCCCGCTGGCCACTTGTCCCTGCA
GAGGTCAACAAAGTACGGACAGCTGCAGAGGATTGTGCCCAAGCGGCTGT
TCTTCGACCAGACCCGCAAGTGCTACTGTGGCATCCTCAACGATTGGATG
CTGTGCTATGCCGACGGCCCGACCGCCTGTCGACCCAGCAGCACGCTCTA
CTTGAAGAGCTCCTCCATCGAGATTGAACACTTCGGAGAGGGGAAGCGGC
GCGACATCTGCTTCCAGATCACAACAGACGACCCCAACAAGAAGTTCGTG
TACCAGGCCAACAACGAAGTCGATGCCAAAGAGTGGATACACGCCATTGA
GGCGGCCATCCGCGGAGATGCTGGTGCTCATTCAGCGTTAAAGACTCCAC
CGCCCCGGAAACTGCCCACGCCGCCGGTCCAAAAGAAATCCACCTACACA
GCAGCGGATATCATCTACGAGGAGCCCTCGCCCGTGTATGGTCTCATAGA
CTCCTCCTCCATGGTGCTCCCTAAGCTGCCGGAGAAAAGCAACAGCCCAA
GCGCCCTCGCCCGACGTTTCGAGTACGATGTGCCCAAATGCCCGGCACAG
CCGCTGCAGGACACCTCCTCCAGGGTGGCATCTGTAAGTGGGGAGCTGGA
ATCCCTGGGACTACTCAACGAGGGAGATATTAAGGTGCAACCGCAGCCTT
CCAGTTTGCACGGAAGCATATCGCTGGACTTCCAGGCCAGGGTGAAAACA
GTGCACAGTGAGCTCTCCACCCAGTTATCAGCGGCCGGTCCCAGTCCGGA
TCGTCTGAAAAAGGCAGCGAAAAAGAGCTATTCGAATGGTAGTGAACCGG
AGATGCTCTCTCCCCTGACCAGCCCCGTCCAAACGCCCACCAAGGATCAG
AAGAAGCAGCGCAAGTCAACCACCTCACCGCAATCCAGTCCGGTCAGCAA
GGACTGCGACAAGCTGGCACGAAACTGGTTCCTCAGTCGCCTTAACAAGA
GCACCGGATTGAAGGCGACCAACACGGGCAGTGCATCACCAACCAACGCC
AAGTGCAAGCAGAGCGAGAAGGAGAACCTGCTGACGGAAGCGGAGCTGGG
CGAGGGCTATGATGCAAGTCCTGGTGATCGGTATCACGGCCTGCCGGGCA
GCCCGCCCACGTCGCCGTGTCTGAAGGCGGAGGCCAAGAGCAAGGTGAAC
ATGATTATCAACCAGTTTGAGAGTAGCGGTCACCTGTCCACCATGTTCAG
CGTGGAAGCTTTGGCCGCCAATGCACTCGCCTCGCTGACATCCTTCTGCG
AAAGTGATGGTTGCAACAACTACGAGCCAATCATGCCCCTGGCCACGACT
CCCAGCAGCTTTCTCAAGAAGGTGTAGACTGCCGCACATCCGTCATCTGC
TATTCACATCCGACGTCCTGGAGAGCTCGTTCGTCTCTGTATTGTAGATT
TAATCCTTAGGCTAGTGAAAACCACTCTCCGGATGTCACATAACTTTGAC
ATAAAATTTTAATATCAAAAAAAAAAAAAAAAA
LP02193.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:06:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blow-RC | 4603 | blow-RC | 27..4597 | 1..4570 | 22815 | 99.9 | Plus |
| blow-RA | 2804 | blow-RA | 587..2610 | 2547..4570 | 10120 | 100 | Plus |
| blow.b | 2610 | blow.b | 428..2451 | 2547..4570 | 10120 | 100 | Plus |
| blow-RA | 2804 | blow-RA | 167..587 | 1..421 | 2105 | 100 | Plus |
| blow.b | 2610 | blow.b | 145..428 | 138..421 | 1420 | 100 | Plus |
| blow.b | 2610 | blow.b | 27..145 | 1..119 | 595 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:59:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr2R | 21145070 | chr2R | 3469970..3472691 | 2862..119 | 13185 | 98.9 | Minus |
| chr2R | 21145070 | chr2R | 3468008..3469711 | 4566..2863 | 8445 | 99.7 | Minus |
| chr2R | 21145070 | chr2R | 3474273..3474391 | 119..1 | 595 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:46:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:58:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7582614..7585358 | 2862..119 | 13675 | 100 | Minus |
| 2R | 25286936 | 2R | 7580647..7582354 | 4570..2863 | 8540 | 100 | Minus |
| 2R | 25286936 | 2R | 7586932..7587050 | 119..1 | 595 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:37:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25260384 | 2R | 7583813..7586557 | 2862..119 | 13685 | 99.9 | Minus |
| 2R | 25260384 | 2R | 7581846..7583553 | 4570..2863 | 8540 | 100 | Minus |
| 2R | 25260384 | 2R | 7588131..7588249 | 119..1 | 595 | 100 | Minus |
Blast to na_te.dros performed 2019-03-15 19:58:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| invader3 | 5484 | invader3 INVADER3 5484bp | 1577..1621 | 3671..3625 | 122 | 76.6 | Minus |
LP02193.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:59:48 Download gff for
LP02193.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr2R | 3468008..3469711 | 2863..4566 | 99 | <- | Minus |
| chr2R | 3469970..3472690 | 120..2862 | 96 | <- | Minus |
| chr2R | 3474273..3474391 | 1..119 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed on 2008-12-08 19:33:42 has no hits.
Sim4 to dmel-all-CDS-r5.32.fasta performed on 2011-03-16 17:48:42 has no hits.
Sim4 to dmel-all-CDS-r5.52.fasta performed on 2013-08-04 05:04:19 has no hits.
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 18:41:14 has no hits.
Sim4 to dmel-all-CDS-r6.02.fasta performed on 2014-11-26 22:11:49 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2008-11-10 21:25:26 has no hits.
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:48:42 Download gff for
LP02193.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| blow-RC | 27..4593 | 1..4566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 05:04:19 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 17:33:21 Download gff for
LP02193.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| blow-RA | 1..413 | 8..420 | 100 | == | Plus |
| blow-RA | 414..2433 | 2547..4566 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-26 22:11:49 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:59:48 Download gff for
LP02193.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7580651..7582354 | 2863..4566 | 100 | <- | Minus |
| 2R | 7582614..7585357 | 120..2862 | 99 | <- | Minus |
| 2R | 7586932..7587050 | 1..119 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:59:48 Download gff for
LP02193.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7580651..7582354 | 2863..4566 | 100 | <- | Minus |
| 2R | 7582614..7585357 | 120..2862 | 99 | <- | Minus |
| 2R | 7586932..7587050 | 1..119 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:59:48 Download gff for
LP02193.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7580651..7582354 | 2863..4566 | 100 | <- | Minus |
| 2R | 7582614..7585357 | 120..2862 | 99 | <- | Minus |
| 2R | 7586932..7587050 | 1..119 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:04:19 Download gff for
LP02193.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3468156..3469859 | 2863..4566 | 100 | <- | Minus |
| arm_2R | 3470119..3472862 | 120..2862 | 99 | <- | Minus |
| arm_2R | 3474437..3474555 | 1..119 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:13:32 Download gff for
LP02193.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7581850..7583553 | 2863..4566 | 100 | <- | Minus |
| 2R | 7583813..7586556 | 120..2862 | 99 | <- | Minus |
| 2R | 7588131..7588249 | 1..119 | 100 | | Minus |
LP02193.hyp Sequence
Translation from 2828 to 4426
> LP02193.hyp
MLASPSPSKSSLSASREYIDLGSSGSLDRCSVNQPVPAAKDKEPHQQLYE
ICQGQGAGQDEDEAQQAITFTHEVFIDCPYADLPAGHLSLQRSTKYGQLQ
RIVPKRLFFDQTRKCYCGILNDWMLCYADGPTACRPSSTLYLKSSSIEIE
HFGEGKRRDICFQITTDDPNKKFVYQANNEVDAKEWIHAIEAAIRGDAGA
HSALKTPPPRKLPTPPVQKKSTYTAADIIYEEPSPVYGLIDSSSMVLPKL
PEKSNSPSALARRFEYDVPKCPAQPLQDTSSRVASVSGELESLGLLNEGD
IKVQPQPSSLHGSISLDFQARVKTVHSELSTQLSAAGPSPDRLKKAAKKS
YSNGSEPEMLSPLTSPVQTPTKDQKKQRKSTTSPQSSPVSKDCDKLARNW
FLSRLNKSTGLKATNTGSASPTNAKCKQSEKENLLTEAELGEGYDASPGD
RYHGLPGSPPTSPCLKAEAKSKVNMIINQFESSGHLSTMFSVEALAANAL
ASLTSFCESDGCNNYEPIMPLATTPSSFLKKV*
LP02193.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:44:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blow-PB | 637 | CG1363-PB | 106..637 | 1..532 | 2773 | 100 | Plus |
| blow-PD | 644 | CG1363-PD | 113..644 | 1..532 | 2773 | 100 | Plus |
| blow-PA | 644 | CG1363-PA | 113..644 | 1..532 | 2773 | 100 | Plus |
LP02193.pep Sequence
Translation from 2828 to 4426
> LP02193.pep
MLASPSPSKSSLSASREYIDLGSSGSLDRCSVNQPVPAAKDKEPHQQLYE
ICQGQGAGQDEDEAQQAITFTHEVFIDCPYADLPAGHLSLQRSTKYGQLQ
RIVPKRLFFDQTRKCYCGILNDWMLCYADGPTACRPSSTLYLKSSSIEIE
HFGEGKRRDICFQITTDDPNKKFVYQANNEVDAKEWIHAIEAAIRGDAGA
HSALKTPPPRKLPTPPVQKKSTYTAADIIYEEPSPVYGLIDSSSMVLPKL
PEKSNSPSALARRFEYDVPKCPAQPLQDTSSRVASVSGELESLGLLNEGD
IKVQPQPSSLHGSISLDFQARVKTVHSELSTQLSAAGPSPDRLKKAAKKS
YSNGSEPEMLSPLTSPVQTPTKDQKKQRKSTTSPQSSPVSKDCDKLARNW
FLSRLNKSTGLKATNTGSASPTNAKCKQSEKENLLTEAELGEGYDASPGD
RYHGLPGSPPTSPCLKAEAKSKVNMIINQFESSGHLSTMFSVEALAANAL
ASLTSFCESDGCNNYEPIMPLATTPSSFLKKV*
LP02193.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 22:35:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\GF11709-PA | 630 | GF11709-PA | 102..630 | 1..532 | 2116 | 82.5 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 22:36:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dere\GG10729-PA | 641 | GG10729-PA | 125..641 | 16..532 | 2503 | 94.2 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 22:36:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dgri\GH20021-PA | 672 | GH20021-PA | 152..672 | 16..532 | 1637 | 67 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:46:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blow-PB | 637 | CG1363-PB | 106..637 | 1..532 | 2773 | 100 | Plus |
| blow-PD | 644 | CG1363-PD | 113..644 | 1..532 | 2773 | 100 | Plus |
| blow-PA | 644 | CG1363-PA | 113..644 | 1..532 | 2773 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 22:36:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmoj\GI19201-PA | 718 | GI19201-PA | 138..718 | 8..532 | 1604 | 61.2 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 22:36:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dper\GL20103-PA | 659 | GL20103-PA | 100..659 | 1..532 | 1766 | 72.6 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 22:36:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dpse\GA12421-PC | 652 | GA12421-PC | 126..652 | 29..532 | 1783 | 73.3 | Plus |
| Dpse\GA12421-PB | 659 | GA12421-PB | 133..659 | 29..532 | 1783 | 73.3 | Plus |
| Dpse\GA12421-PD | 619 | GA12421-PD | 93..619 | 29..532 | 1780 | 73.3 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 22:36:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsec\GM20776-PA | 631 | GM20776-PA | 104..631 | 1..532 | 2722 | 95.9 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 22:36:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsim\GD10237-PA | 620 | GD10237-PA | 106..620 | 1..532 | 2675 | 94.7 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 22:36:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\GJ20268-PA | 677 | GJ20268-PA | 143..677 | 16..532 | 1633 | 64 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 22:36:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dwil\GK10711-PA | 616 | GK10711-PA | 134..616 | 16..532 | 1442 | 62.4 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 22:36:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\GE23805-PA | 641 | GE23805-PA | 123..641 | 16..532 | 2470 | 92.5 | Plus |
