BDGP Sequence Production Resources |
Search the DGRC for LP02372
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 23 |
Well: | 72 |
Vector: | pOT2 |
Associated Gene/Transcript | Egm-RA |
Protein status: | LP02372.pep: gold |
Sequenced Size: | 2038 |
Gene | Date | Evidence |
---|---|---|
CG9006 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9006 | 2004-10-04 | Blastp of sequenced clone |
Egm | 2008-04-29 | Release 5.5 accounting |
Egm | 2008-08-15 | Release 5.9 accounting |
Egm | 2008-12-18 | 5.12 accounting |
2038 bp (2038 high quality bases) assembled on 2004-10-04
GenBank Submission: BT016075
> LP02372.complete TGCGAACCTATCGGGGCTTACCTAATTTCTTAGTAAATATGCGGCCCAAT TTGTTTTCCGGCGCCTCGCGGCTCTTGACTTACAGCCGAAATGGAAAACT TCTGACTCGGGGAAGAAGCACCAAGGCCACGTCCAGCAGCTTGGACTCAC AGCACCAGGATGCGGCGACCACGGAGGGTGGAAGAGCGGAATCCGTAGAG GAGTCCCCGGAGCAGCAGCGAAAACTACCAACCAGAGAGCCGCTGGCCAA AAACTTCTTCATCGGAGTGGTGGACAAGGAGCTGCTGGCCTATCCGGAGG TGATTCCACGGGATGAGATGGCCCAGCTGGAGAATTCCCTGCTGCCGCTG AAGAACTACTTTGTGGAGCCACGTGAAACGGAGGAGACCTCACCGGAGAC CCTCCGCCAGCTGGGACTCTATGGGCTAAATGTGTCCACAGATTACGAGG GCAAAGGCTATGGCTGGAGTGCCAGTCTAATGGCCAGTGAGCCGGATTCA ACGGATATCAATGTAACCCTGGGCCTGCAAACGCATCGCGTGGTCGTGGA TCTTCTGAAAGAGGTTGGAACTCCGTTGCAACAGCAGAGGTATCTCCAGG ACTTGGCCACTGGTAAACTGATAGGTACCGAGGCTATATATGAGATATCT CCACCCGAGGAGGATTACTTTAACACCACGGCAGAGTTGTTTCCCGAATA CGGAAAGTGGCAGCTCAATGGCGAAAAATCATTCGTGATCTGCACACCCG GCGAGCGGCAGCTTTTCCTGGTTCTGGCCCAAACCCAACAGCCGAATGTT CCGGGAGTTTTGGGACGTGGCACCACCATCTTTCTGGTTGATTCCCAGCA GGAAGGAGTGCGCCTGGGCGAAAAGCACGCCACATTCGGTTGCCGGAAAG CGGAAATTAGGCGTGTGCACTTCGAAGGCGTTAAGTTGGGAGAGGATCAG GTGGTGGGCCTACCACACGATGGCAACCGCTATTCGGAGCAGCTGGTGCG ATCCTCCCGCTTGAGGGGCAGCTTGGTGGGACTATCGCTGGCCAAGAAAC TGCTAAACGAATTGGCCCAGTACACTGTGAACACCACTCAGTGCGGAGTA CAACTGCAAGACCTGGAGCTCACCCGCATCCATATGTCGCGCGCGATGTG CTCCGTTTACGCGATGGAGAGCATGCTCTACCTGACCGCCGGGTTGCTGG ATGAGTTCCGTGCCCAGGATGTGACTCTGGAGAGTGCCATAACAAAGTAC TTTACCCTGCGACAGGTGTACGCCATTGCCTCCCAGAATCTGGGAGTCGT GGGACCCAAGAGTCTGCTCAGCGGTGAGACCACGGAGCTGGGACTACGAG ATGCAGCGCAGCTGTGCACGCAAGGTGAATCCCTGGACACCTTGGGCATG TTCATTGCCCTCACCGGATTGCAGCACGCGGGGCAAGCCATGAATACGGG CGTGCGAAAGTCCAGAAATCCACTCTTCAATCCTGGTCACATTTTTGGTA AATTCCTGGACAACAACAGCATCGACAATCCCAAGACCAAGATGCAGCTT TCGGAGCACGTGCATCCCTCCCTTGAGGCGGCTGCCCAGTGCATTGAACT GTCGGTGGCGCGTCTCCAAATGGCCGTGGAGCTGATGTTCACCAAGCACG GCAACGCGGTGGTGGAGCGTCAAAGTGAAATGCAGCGCCTGGCGGAGGTG GGCACCCTTATCTATGCCATGTGGGCCAGCGTGGCGAGGGCATCCCGATC GTATTGCATTGGACTGCCGCTGGCGGATCATGAACTGCTCACGGCCACAG CGATATGCTCGGAGGGCAGGGATCGCGTCCGCACCCTCTGCACGGAGATC TATGGCGGTCATTTTGTGAACAACGACAACAACCTGGTGCGACTCTCCAA GCAAGTGGCCAAGAGCAAGGGCTACTTCGCTGTTCATCCGCTGACATTTA ACTTCTAAGCCAAGCTGGTAGTTAAGTTTATTATTGCCTTTACGATTAAA GTGAATACTTGTTATTGATAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 7505258..7506365 | 1108..1 | 5480 | 99.6 | Minus |
chr2R | 21145070 | chr2R | 7504225..7504811 | 2019..1433 | 2935 | 100 | Minus |
chr2R | 21145070 | chr2R | 7504872..7505196 | 1433..1109 | 1625 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 11617902..11619009 | 1108..1 | 5540 | 100 | Minus |
2R | 25286936 | 2R | 11616867..11617455 | 2021..1433 | 2945 | 100 | Minus |
2R | 25286936 | 2R | 11617516..11617840 | 1433..1109 | 1625 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 11619101..11620208 | 1108..1 | 5540 | 100 | Minus |
2R | 25260384 | 2R | 11618066..11618654 | 2021..1433 | 2945 | 100 | Minus |
2R | 25260384 | 2R | 11618715..11619039 | 1433..1109 | 1625 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 7504225..7504810 | 1434..2019 | 100 | <- | Minus |
chr2R | 7504872..7505196 | 1109..1433 | 100 | <- | Minus |
chr2R | 7505258..7506365 | 1..1108 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Egm-RA | 1..1920 | 39..1958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Egm-RA | 1..1920 | 39..1958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Egm-RA | 1..1920 | 39..1958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Egm-RA | 1..1920 | 39..1958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Egm-RA | 1..1920 | 39..1958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Egm-RA | 2..2020 | 1..2019 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Egm-RA | 2..2020 | 1..2019 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Egm-RA | 15..2033 | 1..2019 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Egm-RA | 2..2020 | 1..2019 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Egm-RA | 15..2033 | 1..2019 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11616869..11617454 | 1434..2019 | 100 | <- | Minus |
2R | 11617516..11617840 | 1109..1433 | 100 | <- | Minus |
2R | 11617902..11619009 | 1..1108 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11616869..11617454 | 1434..2019 | 100 | <- | Minus |
2R | 11617516..11617840 | 1109..1433 | 100 | <- | Minus |
2R | 11617902..11619009 | 1..1108 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11616869..11617454 | 1434..2019 | 100 | <- | Minus |
2R | 11617516..11617840 | 1109..1433 | 100 | <- | Minus |
2R | 11617902..11619009 | 1..1108 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 7504374..7504959 | 1434..2019 | 100 | <- | Minus |
arm_2R | 7505021..7505345 | 1109..1433 | 100 | <- | Minus |
arm_2R | 7505407..7506514 | 1..1108 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11618068..11618653 | 1434..2019 | 100 | <- | Minus |
2R | 11618715..11619039 | 1109..1433 | 100 | <- | Minus |
2R | 11619101..11620208 | 1..1108 | 100 | Minus |
Translation from 2 to 1957
> LP02372.hyp RTYRGLPNFLVNMRPNLFSGASRLLTYSRNGKLLTRGRSTKATSSSLDSQ HQDAATTEGGRAESVEESPEQQRKLPTREPLAKNFFIGVVDKELLAYPEV IPRDEMAQLENSLLPLKNYFVEPRETEETSPETLRQLGLYGLNVSTDYEG KGYGWSASLMASEPDSTDINVTLGLQTHRVVVDLLKEVGTPLQQQRYLQD LATGKLIGTEAIYEISPPEEDYFNTTAELFPEYGKWQLNGEKSFVICTPG ERQLFLVLAQTQQPNVPGVLGRGTTIFLVDSQQEGVRLGEKHATFGCRKA EIRRVHFEGVKLGEDQVVGLPHDGNRYSEQLVRSSRLRGSLVGLSLAKKL LNELAQYTVNTTQCGVQLQDLELTRIHMSRAMCSVYAMESMLYLTAGLLD EFRAQDVTLESAITKYFTLRQVYAIASQNLGVVGPKSLLSGETTELGLRD AAQLCTQGESLDTLGMFIALTGLQHAGQAMNTGVRKSRNPLFNPGHIFGK FLDNNSIDNPKTKMQLSEHVHPSLEAAAQCIELSVARLQMAVELMFTKHG NAVVERQSEMQRLAEVGTLIYAMWASVARASRSYCIGLPLADHELLTATA ICSEGRDRVRTLCTEIYGGHFVNNDNNLVRLSKQVAKSKGYFAVHPLTFN F*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Egm-PA | 639 | CG9006-PA | 1..639 | 13..651 | 3267 | 100 | Plus |
CG7461-PC | 627 | CG7461-PC | 32..617 | 67..640 | 396 | 25 | Plus |
CG7461-PB | 627 | CG7461-PB | 32..617 | 67..640 | 396 | 25 | Plus |
CG4860-PA | 415 | CG4860-PA | 77..387 | 134..451 | 161 | 22.6 | Plus |
Translation from 38 to 1957
> LP02372.pep MRPNLFSGASRLLTYSRNGKLLTRGRSTKATSSSLDSQHQDAATTEGGRA ESVEESPEQQRKLPTREPLAKNFFIGVVDKELLAYPEVIPRDEMAQLENS LLPLKNYFVEPRETEETSPETLRQLGLYGLNVSTDYEGKGYGWSASLMAS EPDSTDINVTLGLQTHRVVVDLLKEVGTPLQQQRYLQDLATGKLIGTEAI YEISPPEEDYFNTTAELFPEYGKWQLNGEKSFVICTPGERQLFLVLAQTQ QPNVPGVLGRGTTIFLVDSQQEGVRLGEKHATFGCRKAEIRRVHFEGVKL GEDQVVGLPHDGNRYSEQLVRSSRLRGSLVGLSLAKKLLNELAQYTVNTT QCGVQLQDLELTRIHMSRAMCSVYAMESMLYLTAGLLDEFRAQDVTLESA ITKYFTLRQVYAIASQNLGVVGPKSLLSGETTELGLRDAAQLCTQGESLD TLGMFIALTGLQHAGQAMNTGVRKSRNPLFNPGHIFGKFLDNNSIDNPKT KMQLSEHVHPSLEAAAQCIELSVARLQMAVELMFTKHGNAVVERQSEMQR LAEVGTLIYAMWASVARASRSYCIGLPLADHELLTATAICSEGRDRVRTL CTEIYGGHFVNNDNNLVRLSKQVAKSKGYFAVHPLTFNF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12390-PA | 641 | GF12390-PA | 1..641 | 1..639 | 2819 | 81.6 | Plus |
Dana\GF23652-PA | 527 | GF23652-PA | 2..486 | 115..597 | 331 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22640-PA | 638 | GG22640-PA | 1..638 | 1..639 | 3227 | 94.4 | Plus |
Dere\GG21959-PA | 627 | GG21959-PA | 32..586 | 55..597 | 395 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20496-PA | 638 | GH20496-PA | 1..638 | 1..639 | 2107 | 63.7 | Plus |
Dgri\GH15160-PA | 578 | GH15160-PA | 6..578 | 77..638 | 371 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Egm-PA | 639 | CG9006-PA | 1..639 | 1..639 | 3267 | 100 | Plus |
CG7461-PC | 627 | CG7461-PC | 32..617 | 55..628 | 396 | 25 | Plus |
CG7461-PB | 627 | CG7461-PB | 32..617 | 55..628 | 396 | 25 | Plus |
CG4860-PA | 415 | CG4860-PA | 77..387 | 122..439 | 161 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21039-PA | 640 | GI21039-PA | 1..640 | 1..639 | 2152 | 64.9 | Plus |
Dmoj\GI12099-PA | 581 | GI12099-PA | 3..540 | 72..597 | 346 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10675-PA | 608 | GL10675-PA | 30..608 | 64..639 | 2428 | 77.4 | Plus |
Dper\GL14800-PA | 580 | GL14800-PA | 1..539 | 69..596 | 338 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21471-PA | 648 | GA21471-PA | 2..648 | 1..639 | 2627 | 74.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20419-PA | 639 | GM20419-PA | 1..639 | 1..639 | 3332 | 97.2 | Plus |
Dsec\GM21947-PA | 627 | GM21947-PA | 32..586 | 55..597 | 393 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25894-PA | 640 | GD25894-PA | 1..640 | 1..639 | 3191 | 93.8 | Plus |
Dsim\GD11444-PA | 627 | GD11444-PA | 32..586 | 55..597 | 387 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21966-PA | 640 | GJ21966-PA | 1..640 | 1..639 | 2216 | 67.2 | Plus |
Dvir\GJ13373-PA | 581 | GJ13373-PA | 3..571 | 72..628 | 356 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22223-PA | 647 | GK22223-PA | 1..647 | 1..639 | 2354 | 67.9 | Plus |
Dwil\GK24068-PA | 413 | GK24068-PA | 1..321 | 262..583 | 264 | 25.2 | Plus |
Dwil\GK11564-PA | 384 | GK11564-PA | 45..357 | 122..439 | 168 | 23.2 | Plus |