BDGP Sequence Production Resources |
Search the DGRC for LP02729
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 27 |
Well: | 29 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11816-RB |
Protein status: | LP02729.pep: gold |
Preliminary Size: | 1054 |
Sequenced Size: | 1489 |
Gene | Date | Evidence |
---|---|---|
CG11816 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11816 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11816 | 2008-04-29 | Release 5.5 accounting |
CG11816 | 2008-04-29 | Picked prior to 5.5 |
CG11816 | 2008-08-15 | Release 5.9 accounting |
CG11816 | 2008-12-18 | 5.12 accounting |
1489 bp assembled on 2007-10-25
GenBank Submission: BT031140
> LP02729.complete AAAAGCGCCCGCAGACATGTCATCAAACAGAATCCGGCCGGAGTTGGTAC TCCTGCAGCTGCTGCTACTGGCGGCCACATTAATCCCTTTGCTGCAGGCC GGGATAGTTACAGCTCCGTACTCCGAATCGGATTCGGATTTGGATTCGAA TCCGGACACCACCGCCACCACCATCGCCACCATCGCCACCATCACCACCG ACAACTACAACCCGCATGCGGAGGAGCTGCAACTGGAATCGGAGACGGAG GCCACTGCTGCTCAAGTGGATGGCCAACGCATCGACTGCAAATTGACTTT CGATGCGGCGACAATGGACTCGTTAGGCTGCCACAATGAGGGGGCGTTGC CGGAGAGGGGGGCGTTACCAGGCAGTGGTAATAAGCCGGTGGAGGAGATG CCTGAGGCAAATCCAGACTGGCGGCGCCACTTGAAGTCACCGGACAGCCA GCCCATCTATGAATTACAATTGGTTGTTTGGCCCAGTGACATCGAGGACG GTGATGACTTCAGTCCACCGCTGTCCACTACAACAACAACAGAAGCAACA ACAACGACAGCTAGGACCACTAGAGCCACCAGTAGCACCACTAGCATCAC CCCCAAGCCCACCCAAATTGGGACACCTATTGAGCAAATATGGCCATTGT ACGAGGATCAATTGGTTGTATTTCCGCAAATGGACTTTGAAGAGGAGAAT CTTGATTATTTCTTCGACGAAGTGCCACCATCCACATCGTCGACCACCGG TCGCCCGTTGACCACCAGTCATCCCACCGGCACGCCCACTCCCACGCCCA TTTATGTTGTGCAAAACTATCACGTTATACACCCCAATGGCACCGAGGAG TACAAATTGGTGATGAGCAACGGCCTGGTGAACTACAAGAAGCTGTACTC CAAGAAAGTGGGTGACCGGTTGATCAACGTTCAGGAGGGCTACAATTCAG TGCCCATTCCAGGACCTAAAAACCAAATCCAGACACAGTACTATATTGCC GACGAGCGGGGCTACAATGTCTATAGAATCGAGCTCCACTATCACCAGCC AGGGTTGTTGCCCAAACATTTGCATTACAAAGCCACAAAAGCGACCAATA TGTGAATGAGGATGGGCAGGATTTCCAGTTGGCGGCACAGTGGTGCTAAC CACTAAGTAAACATATATATATTTTTTTTGCATTTTTTTTTTATAACTTA TTTTAGCTGAAGAGTTTCCAATAAATTGTAAAGAAAACTTGTATTTTTAT TTAGTGTTTGCATGTGAAATTAAACAAGATTTTTTAAATAGTTTAAACTG GCATATATACGCAGATATATTTGTATCTTTTGCTTGTGAGTTAAGTTTTT AATTTCAGCTGTGCTTGCATATAGTTATAAAATGTATAAGTATTTGTTTA TTATAATTTTTCGACCCAAGGTTCACTTTGTTGGGTGCAAAAAAATGGCG AAATAAAATGTAGAGCCCACAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11816.a | 1623 | CG11816.a | 154..1623 | 1..1470 | 7350 | 100 | Plus |
CG11816.b | 1322 | CG11816.b | 3..1030 | 1..1028 | 5140 | 100 | Plus |
CG11816-RA | 1111 | CG11816-RA | 3..1030 | 1..1028 | 5140 | 100 | Plus |
CG11816.b | 1322 | CG11816.b | 1122..1322 | 1029..1229 | 1005 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 13444142..13444996 | 855..1 | 4275 | 100 | Minus |
chrX | 22417052 | chrX | 13443287..13443731 | 1470..1029 | 2130 | 99.1 | Minus |
chrX | 22417052 | chrX | 13443823..13443995 | 1028..856 | 865 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 13553411..13554265 | 855..1 | 4275 | 100 | Minus |
X | 23542271 | X | 13552555..13553000 | 1474..1029 | 2230 | 100 | Minus |
X | 23542271 | X | 13553092..13553264 | 1028..856 | 865 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 13561509..13562363 | 855..1 | 4275 | 100 | Minus |
X | 23527363 | X | 13560653..13561098 | 1474..1029 | 2230 | 100 | Minus |
X | 23527363 | X | 13561190..13561362 | 1028..856 | 865 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2304..2407 | 512..617 | 164 | 64.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1503..1619 | 511..631 | 162 | 62.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2442..2526 | 528..613 | 157 | 66.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2799..2910 | 531..644 | 141 | 60.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2322..2410 | 515..605 | 134 | 63.7 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 1182..1275 | 1412..1317 | 133 | 62.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2466..2552 | 531..618 | 131 | 62.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2385..2468 | 525..606 | 127 | 63.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 5629..5675 | 511..557 | 127 | 74.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2865..2944 | 531..611 | 123 | 64.6 | Plus |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 504..583 | 519..599 | 123 | 63 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1124..1160 | 525..561 | 122 | 81.1 | Plus |
copia | 5143 | copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4). | 1771..1823 | 1249..1303 | 117 | 70.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 13443287..13443731 | 1029..1470 | 99 | <- | Minus |
chrX | 13443823..13443995 | 856..1028 | 100 | <- | Minus |
chrX | 13444142..13444996 | 1..855 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11816-RA | 1..1017 | 17..1033 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11816-RA | 1..1017 | 17..1033 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11816-RD | 1..1089 | 17..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11816-RA | 1..1017 | 17..1033 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11816-RD | 1..1089 | 17..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11816-RA | 1..1033 | 1..1033 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11816-RA | 1..1033 | 1..1033 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11816-RD | 489..1958 | 1..1470 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11816-RA | 1..1033 | 1..1033 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11816-RD | 489..1958 | 1..1470 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13553092..13553264 | 856..1028 | 100 | <- | Minus |
X | 13552559..13553000 | 1029..1470 | 100 | <- | Minus |
X | 13553411..13554265 | 1..855 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13553092..13553264 | 856..1028 | 100 | <- | Minus |
X | 13552559..13553000 | 1029..1470 | 100 | <- | Minus |
X | 13553411..13554265 | 1..855 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13553092..13553264 | 856..1028 | 100 | <- | Minus |
X | 13552559..13553000 | 1029..1470 | 100 | <- | Minus |
X | 13553411..13554265 | 1..855 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 13446592..13447033 | 1029..1470 | 100 | <- | Minus |
arm_X | 13447125..13447297 | 856..1028 | 100 | <- | Minus |
arm_X | 13447444..13448298 | 1..855 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13560657..13561098 | 1029..1470 | 100 | <- | Minus |
X | 13561190..13561362 | 856..1028 | 100 | <- | Minus |
X | 13561509..13562363 | 1..855 | 100 | Minus |
Translation from 0 to 1104
> LP02729.hyp KAPADMSSNRIRPELVLLQLLLLAATLIPLLQAGIVTAPYSESDSDLDSN PDTTATTIATIATITTDNYNPHAEELQLESETEATAAQVDGQRIDCKLTF DAATMDSLGCHNEGALPERGALPGSGNKPVEEMPEANPDWRRHLKSPDSQ PIYELQLVVWPSDIEDGDDFSPPLSTTTTTEATTTTARTTRATSSTTSIT PKPTQIGTPIEQIWPLYEDQLVVFPQMDFEEENLDYFFDEVPPSTSSTTG RPLTTSHPTGTPTPTPIYVVQNYHVIHPNGTEEYKLVMSNGLVNYKKLYS KKVGDRLINVQEGYNSVPIPGPKNQIQTQYYIADERGYNVYRIELHYHQP GLLPKHLHYKATKATNM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11816-PB | 362 | CG11816-PB | 1..362 | 6..367 | 1911 | 100 | Plus |
CG11816-PD | 362 | CG11816-PD | 1..362 | 6..367 | 1911 | 100 | Plus |
CG11816-PC | 346 | CG11816-PC | 1..339 | 6..344 | 1774 | 99.7 | Plus |
CG11816-PA | 346 | CG11816-PA | 1..339 | 6..344 | 1774 | 99.7 | Plus |
Translation from 1 to 1104
> LP02729.pep KAPADMSSNRIRPELVLLQLLLLAATLIPLLQAGIVTAPYSESDSDLDSN PDTTATTIATIATITTDNYNPHAEELQLESETEATAAQVDGQRIDCKLTF DAATMDSLGCHNEGALPERGALPGSGNKPVEEMPEANPDWRRHLKSPDSQ PIYELQLVVWPSDIEDGDDFSPPLSTTTTTEATTTTARTTRATSSTTSIT PKPTQIGTPIEQIWPLYEDQLVVFPQMDFEEENLDYFFDEVPPSTSSTTG RPLTTSHPTGTPTPTPIYVVQNYHVIHPNGTEEYKLVMSNGLVNYKKLYS KKVGDRLINVQEGYNSVPIPGPKNQIQTQYYIADERGYNVYRIELHYHQP GLLPKHLHYKATKATNM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22377-PA | 390 | GF22377-PA | 1..335 | 6..345 | 856 | 61 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19502-PA | 274 | GG19502-PA | 88..268 | 161..345 | 634 | 77.8 | Plus |
Dere\GG19502-PA | 274 | GG19502-PA | 1..85 | 6..89 | 208 | 76.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12248-PA | 357 | GH12248-PA | 63..331 | 94..344 | 542 | 46.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11816-PB | 362 | CG11816-PB | 1..362 | 6..367 | 1911 | 100 | Plus |
CG11816-PD | 362 | CG11816-PD | 1..362 | 6..367 | 1911 | 100 | Plus |
CG11816-PC | 346 | CG11816-PC | 1..339 | 6..344 | 1774 | 99.7 | Plus |
CG11816-PA | 346 | CG11816-PA | 1..339 | 6..344 | 1774 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15781-PA | 364 | GI15781-PA | 54..343 | 78..344 | 507 | 47.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20325-PA | 323 | GL20325-PA | 1..323 | 6..367 | 857 | 55.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11215-PA | 482 | GA11215-PA | 1..313 | 6..342 | 790 | 53.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17607-PA | 299 | GM17607-PA | 1..289 | 6..299 | 1052 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24522-PA | 341 | GD24522-PA | 1..335 | 6..345 | 1688 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18638-PA | 353 | GJ18638-PA | 61..346 | 93..364 | 608 | 52.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19786-PA | 326 | GK19786-PA | 20..324 | 73..361 | 567 | 47.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16154-PA | 376 | GE16154-PA | 1..359 | 6..345 | 1083 | 73.8 | Plus |