BDGP Sequence Production Resources |
Search the DGRC for LP02760
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 27 |
Well: | 60 |
Vector: | pOT2 |
Associated Gene/Transcript | Syx8-RA |
Protein status: | LP02760.pep: gold |
Preliminary Size: | 755 |
Sequenced Size: | 940 |
Gene | Date | Evidence |
---|---|---|
CG4109 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4109 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4109 | 2003-08-11 | Blastp of sequenced clone |
Syx8 | 2008-04-29 | Release 5.5 accounting |
Syx8 | 2008-08-15 | Release 5.9 accounting |
Syx8 | 2008-12-18 | 5.12 accounting |
940 bp (940 high quality bases) assembled on 2003-08-11
GenBank Submission: BT011107
> LP02760.complete ATTGCTGGAGGCGTAGTTTTCTGCTTTTGATAATTACTCATAGCAAAAGC AGAGAAATGGCGCTGGTGGATCACGATTCCTGGGACATCGAGTACGAGGG CTGCGAGCGACTGCGGCATCAGCTGCTGGTATACCTCAACCAGCGGCAGC AGCTCAATCCGAGGACGAGCCAGTTCGTCCAACTGACAAGCAGCATTCAG ACGGGAATAGAGCAGCTGGCCAAGGACATGAAGCACCTCAAGGTGGTGCT GGACAACGCCATCACCTGGGAGACGAGCCCGGAGGAGGAGCTGCAACAGC GGCGCATCGACTGGGATAGACTTACTTCGCAGCTGCGCGAGATCCGCGAG AAGTTCGCAAACAGTAGCCGCTCCAATGTCCCGGCCGCATCCGGTTCTGC TTGGCAGGATCAGGATCTCGGCCCAGGTCACAGCAATTCCTCGCGGAATA CCGCCTTGGATGTGGAGGCTCTGAAGCAGAAAAAGACCGAGATGCTGGCG CAGCAGAACGAAGGACTCGAGGTTCTATCAGCCACATTGTCCAGACAGCG CCAACTGGCCACACAGCTGGGCAACGAGGTGGAGGACCAGAACAATATCC TTGACAACTTGGCCAATGCCATGGACCGTGTGGAAACGGGTGTGCAGCGG GAAACACAGAGCATTGGACAGGTTAACCGGCGGGACAGTACCTGGGGCTA CTGGCTCGTCATCATAGCCTTGTTCGTCGCCATCATTGTCGTGGTCTTCG TCTAGCTCCCACGATCCATTCCAGTTGTTATACTACTTTATACTATGACC TGCGTGGAATGTCTATCTGTTAACCCAAAGTTTGATTATTTATGTATACA CCAATTAAAGTAGGATTTATAAGTAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16575877..16576156 | 595..874 | 100 | <- | Minus |
chr3L | 16576210..16576803 | 1..594 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx8-RA | 1..699 | 57..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx8-RA | 1..699 | 57..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx8-RA | 1..699 | 57..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx8-RA | 1..699 | 57..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx8-RA | 1..699 | 57..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx8-RA | 66..820 | 1..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx8-RA | 66..939 | 1..874 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx8-RA | 24..897 | 1..874 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx8-RA | 66..820 | 1..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Syx8-RA | 24..897 | 1..874 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16586108..16586387 | 595..874 | 100 | <- | Minus |
3L | 16586441..16587034 | 1..594 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16586108..16586387 | 595..874 | 100 | <- | Minus |
3L | 16586441..16587034 | 1..594 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16586108..16586387 | 595..874 | 100 | <- | Minus |
3L | 16586441..16587034 | 1..594 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16579208..16579487 | 595..874 | 100 | <- | Minus |
arm_3L | 16579541..16580134 | 1..594 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16579208..16579487 | 595..874 | 100 | <- | Minus |
3L | 16579541..16580134 | 1..594 | 100 | Minus |
Translation from 2 to 754
> LP02760.hyp CWRRSFLLLIITHSKSREMALVDHDSWDIEYEGCERLRHQLLVYLNQRQQ LNPRTSQFVQLTSSIQTGIEQLAKDMKHLKVVLDNAITWETSPEEELQQR RIDWDRLTSQLREIREKFANSSRSNVPAASGSAWQDQDLGPGHSNSSRNT ALDVEALKQKKTEMLAQQNEGLEVLSATLSRQRQLATQLGNEVEDQNNIL DNLANAMDRVETGVQRETQSIGQVNRRDSTWGYWLVIIALFVAIIVVVFV *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Syx8-PA | 232 | CG4109-PA | 1..232 | 19..250 | 1178 | 100 | Plus |
Translation from 56 to 754
> LP02760.pep MALVDHDSWDIEYEGCERLRHQLLVYLNQRQQLNPRTSQFVQLTSSIQTG IEQLAKDMKHLKVVLDNAITWETSPEEELQQRRIDWDRLTSQLREIREKF ANSSRSNVPAASGSAWQDQDLGPGHSNSSRNTALDVEALKQKKTEMLAQQ NEGLEVLSATLSRQRQLATQLGNEVEDQNNILDNLANAMDRVETGVQRET QSIGQVNRRDSTWGYWLVIIALFVAIIVVVFV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10519-PA | 229 | GF10519-PA | 1..229 | 1..232 | 926 | 76.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15870-PA | 232 | GG15870-PA | 1..232 | 1..232 | 1118 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15579-PA | 235 | GH15579-PA | 1..235 | 1..232 | 748 | 63.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Syx8-PA | 232 | CG4109-PA | 1..232 | 1..232 | 1178 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16855-PA | 227 | GI16855-PA | 1..227 | 1..232 | 654 | 58.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17980-PA | 230 | GL17980-PA | 1..230 | 1..232 | 936 | 78.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17964-PA | 230 | GA17964-PA | 1..230 | 1..232 | 936 | 78.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24388-PA | 232 | GM24388-PA | 1..232 | 1..232 | 1149 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12459-PA | 232 | GD12459-PA | 1..232 | 1..232 | 1176 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12605-PA | 229 | GJ12605-PA | 1..229 | 1..232 | 754 | 63.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11384-PA | 239 | GK11384-PA | 1..229 | 1..222 | 679 | 59.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22209-PA | 232 | GE22209-PA | 1..222 | 1..222 | 1082 | 93.7 | Plus |