BDGP Sequence Production Resources |
Search the DGRC for LP02768
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 27 |
Well: | 68 |
Vector: | pOT2 |
Associated Gene/Transcript | slv-RA |
Protein status: | LP02768.pep: gold |
Preliminary Size: | 1243 |
Sequenced Size: | 990 |
Gene | Date | Evidence |
---|---|---|
CG8717 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8717 | 2002-05-18 | Blastp of sequenced clone |
CG8717 | 2003-01-01 | Sim4 clustering to Release 3 |
slv | 2008-04-29 | Release 5.5 accounting |
slv | 2008-08-15 | Release 5.9 accounting |
slv | 2008-12-18 | 5.12 accounting |
990 bp (990 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118993
> LP02768.complete ATTGATCGCTATGTCGGCGGTGGCCTACGACTCACTGCTGTCAACGACGG CGGTGATCAGCACCGTCTTCCAGTTCCTCTCCGGCGCCATGATATGCCGA AAGTACATCCAGAAGAAAAGCACGGGGGACTCTTCCGGAGTTCCCTTCAT ATGCGGATTCTTATCGTGCAGCTTTTGGTTGCGCTACGGTGTCTTAACCA ACGAGCAGAGCATTGTGCTGGTCAACATCATCGGATCGACGCTCTTTCTG GTCTACACGCTGATCTACTATGTGTTTACCGTCAACAAACGTGCCTGTGT AAAGCAGTTTGGGTTTGTTCTGACTGTTCTGGTGGTGGTCATTGTCTACA CCAATCGGCTGGAAGATCAGCGCGATCGAATGATACACGTCACAGGAATT GTGTGCTGCATCGTGACCGTGTGTTTCTTCGCCGCCCCGCTGGCTAGCTT GCTGCATGTGATACGGGCGAAGAACTCCGAGAGCCTTCCCCTGCCTCTGA TAGCCACGTCCTTCGTGGTCAGCCTGCAGTGGCTTATCTACGGTATACTG ATATCGGACTCATTTATCCAGATTCCCAACTTTCTGGGCTGCATACTGTC GCTGCTGCAGTTGGGTCTGTTCGTCCTCTACCCGCCGCGAAGCTACTCCG GCCACGGCTACAAGCTGGTCGAACAGGCAGTGCCGTTTTAGGCAGCTAAT CGGACCAAGCCACGCATTTCGCTTTGGCCTCCGAGCGTGCCGCACACAGG GTTTATACATACATGCTGCTTGCTTAGGCGCCAGGCTTATTTACTATAGA CATACGTAAAAGTAAGCCTATATTTATTGTAAAGTATTTATTTAATCCCG AGGATTTGCCTCGAATATGCCGCTACTTACGTTGCCTTGCTGTTCGGTGG CGCCCATTTAATTGTACCCTTTAGAGCCCGTATTCCTAATAAACGAACAC ACGGGAAACGATTGAGTAACCGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 3967978..3968381 | 972..569 | 2020 | 100 | Minus |
chr2R | 21145070 | chr2R | 3968692..3968922 | 396..166 | 1155 | 100 | Minus |
chr2R | 21145070 | chr2R | 3968450..3968628 | 571..393 | 895 | 100 | Minus |
chr2R | 21145070 | chr2R | 3969434..3969520 | 87..1 | 435 | 100 | Minus |
chr2R | 21145070 | chr2R | 3969279..3969358 | 167..88 | 400 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 8080557..8080962 | 974..569 | 2030 | 100 | Minus |
2R | 25286936 | 2R | 8081273..8081503 | 396..166 | 1155 | 100 | Minus |
2R | 25286936 | 2R | 8081031..8081209 | 571..393 | 895 | 100 | Minus |
2R | 25286936 | 2R | 8082015..8082101 | 87..1 | 435 | 100 | Minus |
2R | 25286936 | 2R | 8081860..8081939 | 167..88 | 400 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 8081756..8082161 | 974..569 | 2030 | 100 | Minus |
2R | 25260384 | 2R | 8082472..8082702 | 396..166 | 1155 | 100 | Minus |
2R | 25260384 | 2R | 8082230..8082408 | 571..393 | 895 | 100 | Minus |
2R | 25260384 | 2R | 8083214..8083300 | 87..1 | 435 | 100 | Minus |
2R | 25260384 | 2R | 8083059..8083138 | 167..88 | 400 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3969434..3969520 | 1..87 | 100 | Minus | |
chr2R | 3967978..3968378 | 572..972 | 100 | <- | Minus |
chr2R | 3968450..3968625 | 396..571 | 100 | <- | Minus |
chr2R | 3968693..3968922 | 166..395 | 100 | <- | Minus |
chr2R | 3969281..3969358 | 88..165 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slv-RA | 1..681 | 11..691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slv-RA | 1..681 | 11..691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slv-RA | 1..681 | 11..691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slv-RA | 1..681 | 11..691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slv-RA | 1..681 | 11..691 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slv-RA | 270..1241 | 1..972 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slv-RA | 270..1241 | 1..972 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slv-RA | 120..1091 | 1..972 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slv-RA | 270..1241 | 1..972 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slv-RA | 120..1091 | 1..972 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8080559..8080959 | 572..972 | 100 | <- | Minus |
2R | 8081031..8081206 | 396..571 | 100 | <- | Minus |
2R | 8081274..8081503 | 166..395 | 100 | <- | Minus |
2R | 8081862..8081939 | 88..165 | 100 | <- | Minus |
2R | 8082015..8082101 | 1..87 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8080559..8080959 | 572..972 | 100 | <- | Minus |
2R | 8081031..8081206 | 396..571 | 100 | <- | Minus |
2R | 8081274..8081503 | 166..395 | 100 | <- | Minus |
2R | 8081862..8081939 | 88..165 | 100 | <- | Minus |
2R | 8082015..8082101 | 1..87 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8080559..8080959 | 572..972 | 100 | <- | Minus |
2R | 8081031..8081206 | 396..571 | 100 | <- | Minus |
2R | 8081274..8081503 | 166..395 | 100 | <- | Minus |
2R | 8081862..8081939 | 88..165 | 100 | <- | Minus |
2R | 8082015..8082101 | 1..87 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3968779..3969008 | 166..395 | 100 | <- | Minus |
arm_2R | 3969367..3969444 | 88..165 | 100 | <- | Minus |
arm_2R | 3968064..3968464 | 572..972 | 100 | <- | Minus |
arm_2R | 3968536..3968711 | 396..571 | 100 | <- | Minus |
arm_2R | 3969520..3969606 | 1..87 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8081758..8082158 | 572..972 | 100 | <- | Minus |
2R | 8082230..8082405 | 396..571 | 100 | <- | Minus |
2R | 8082473..8082702 | 166..395 | 100 | <- | Minus |
2R | 8083061..8083138 | 88..165 | 100 | <- | Minus |
2R | 8083214..8083300 | 1..87 | 100 | Minus |
Translation from 0 to 690
> LP02768.hyp LIAMSAVAYDSLLSTTAVISTVFQFLSGAMICRKYIQKKSTGDSSGVPFI CGFLSCSFWLRYGVLTNEQSIVLVNIIGSTLFLVYTLIYYVFTVNKRACV KQFGFVLTVLVVVIVYTNRLEDQRDRMIHVTGIVCCIVTVCFFAAPLASL LHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIPNFLGCILS LLQLGLFVLYPPRSYSGHGYKLVEQAVPF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
slv-PC | 226 | CG8717-PC | 1..226 | 4..229 | 1151 | 100 | Plus |
slv-PB | 226 | CG8717-PB | 1..226 | 4..229 | 1151 | 100 | Plus |
slv-PA | 226 | CG8717-PA | 1..226 | 4..229 | 1151 | 100 | Plus |
CG7272-PA | 228 | CG7272-PA | 11..213 | 9..211 | 212 | 27.2 | Plus |
Translation from 10 to 690
> LP02768.pep MSAVAYDSLLSTTAVISTVFQFLSGAMICRKYIQKKSTGDSSGVPFICGF LSCSFWLRYGVLTNEQSIVLVNIIGSTLFLVYTLIYYVFTVNKRACVKQF GFVLTVLVVVIVYTNRLEDQRDRMIHVTGIVCCIVTVCFFAAPLASLLHV IRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIPNFLGCILSLLQ LGLFVLYPPRSYSGHGYKLVEQAVPF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11215-PA | 226 | GF11215-PA | 1..226 | 1..226 | 1042 | 92.9 | Plus |
Dana\GF23701-PA | 228 | GF23701-PA | 11..213 | 6..208 | 205 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10680-PA | 226 | GG10680-PA | 1..226 | 1..226 | 1157 | 98.7 | Plus |
Dere\GG15900-PA | 228 | GG15900-PA | 11..213 | 6..208 | 183 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19991-PA | 225 | GH19991-PA | 2..225 | 3..226 | 1031 | 87.5 | Plus |
Dgri\GH14541-PA | 232 | GH14541-PA | 11..213 | 6..208 | 199 | 28.6 | Plus |
Dgri\GH13950-PA | 232 | GH13950-PA | 11..213 | 6..208 | 195 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
slv-PC | 226 | CG8717-PC | 1..226 | 1..226 | 1151 | 100 | Plus |
slv-PB | 226 | CG8717-PB | 1..226 | 1..226 | 1151 | 100 | Plus |
slv-PA | 226 | CG8717-PA | 1..226 | 1..226 | 1151 | 100 | Plus |
CG7272-PA | 228 | CG7272-PA | 11..213 | 6..208 | 212 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20166-PA | 227 | GI20166-PA | 2..227 | 3..226 | 947 | 85.4 | Plus |
Dmoj\GI13112-PA | 230 | GI13112-PA | 23..213 | 18..208 | 201 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10598-PA | 225 | GL10598-PA | 1..225 | 1..226 | 1060 | 89.8 | Plus |
Dper\GL24812-PA | 231 | GL24812-PA | 11..213 | 6..208 | 165 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21278-PA | 226 | GA21278-PA | 1..226 | 1..226 | 1011 | 89.4 | Plus |
Dpse\GA20227-PA | 231 | GA20227-PA | 11..213 | 6..208 | 165 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20727-PA | 226 | GM20727-PA | 1..226 | 1..226 | 1163 | 99.6 | Plus |
Dsec\GM25529-PA | 228 | GM25529-PA | 11..215 | 6..210 | 175 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10194-PA | 226 | GD10194-PA | 1..226 | 1..226 | 1163 | 99.6 | Plus |
Dsim\GD10193-PA | 168 | GD10193-PA | 1..164 | 1..165 | 737 | 88.5 | Plus |
Dsim\GD14544-PA | 228 | GD14544-PA | 11..215 | 6..210 | 178 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20230-PA | 225 | GJ20230-PA | 2..225 | 3..226 | 945 | 84.8 | Plus |
Dvir\GJ13859-PA | 229 | GJ13859-PA | 11..213 | 6..208 | 222 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23163-PA | 226 | GK23163-PA | 1..226 | 1..226 | 990 | 82.7 | Plus |
Dwil\GK20413-PA | 231 | GK20413-PA | 11..213 | 6..208 | 214 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23345-PA | 226 | GE23345-PA | 1..226 | 1..226 | 1137 | 97.3 | Plus |
Dyak\GE22241-PA | 228 | GE22241-PA | 11..215 | 6..210 | 172 | 27.9 | Plus |
Dyak\GE23145-PA | 228 | GE23145-PA | 11..215 | 6..210 | 170 | 28.4 | Plus |