BDGP Sequence Production Resources |
Search the DGRC for LP02841
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 28 |
Well: | 41 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9989-RA |
Protein status: | LP02841.pep: gold |
Preliminary Size: | 1115 |
Sequenced Size: | 1207 |
Gene | Date | Evidence |
---|---|---|
CG9989 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9989 | 2002-05-18 | Blastp of sequenced clone |
CG9989 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9989 | 2008-04-29 | Release 5.5 accounting |
CG9989 | 2008-08-15 | Release 5.9 accounting |
CG9989 | 2008-12-18 | 5.12 accounting |
1207 bp (1207 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118996
> LP02841.complete AGATGCCCGATCTGAAGTATATGTTGACGATTCTAAGCCTGTATTTCTTT GTAGGAAGTGTTCAAGCGAATTGCTTAATCGACTTGGCTCATTTGAATGC CAATTATGTGTACTTAAGCCAAAATAACGGAGTCTATGATATTCAGCGCA GTGATATTGTGGAAATCCACCAGACGTTGTATCTGCTGTGCAATGGAGGA CTTCATCGCACCACATTCCTGTGTCGATATGACAGTGTTTTCAGTCCAGC GCTAAGCTCAGCAGCATGTGCACCACCCGATCCTGTCGTGGTAAAAGTAC CAGATACATCTTGTTCCATTCCGAGTGCTACGTTCGCCGTAGGATTTTCC TTCAATGGACGCTTTATGGAACTGTATCGCAATTGTTTTGATGGCTACAG CTTGGCGTTTCAACATTCCATCTACAAGGCTTATCGCTACGTAAACACCG TTCCACGTCCCAATCCCACTTGGCAGTCGGATCAATTAAGTGGTGGATTT GACAATGCCTACGAGGGAAGAGCAACACAAGCTTGTTTGCTCACTAACCT GGGCGCAGTACAGCCGCAGTGTAAATTTGATCGTGGCCACATGACACCGG CTTCTGCATTTATATCCACAGAGCTGAAGAAGTCAACGTTCAGGTATCTA AACGCTATCCCCCAATATCGAGGAGTTAATCGTGGCAAATGGAAGGCCGT TGAGACCTGGGTGAACAATATGGTTAGGGGACTGTATGATAATCCAATCA TCAATAATGTACAAATACCGCGTACTTACGATGTCCTTAAGGTTTGCATT GGGGCATTGGGAGTGCATAGACTAAGACATAATACCAATAACAATATGAT ACCAATTTACCTGTTGGATAATAACAAAATTCCCGTGCCAGAGTGGATGT ACAAGATAGTTAGCCATCTCTCCGGAGATAAATGGGTAATGCTGACCTAC AACGACGTAAGTCTACCCAATCAGCAGGCATTAAACCAGATCTGCCATGT GATACCCTGTCATCCGGGTCTTAACCTTAATACGAAGGACGTTGGACACA CTGTCTGCTGCGATCCGTACCGTTTTATTACCATAAACGCTCCACACTTA ACTGGTGTTTGCTAAGGTCAAACTAAATATTTTCTTAGATCTTGAAAATG TGCATATTAAAATAAATATAAAGTGGTATTTGAAAAAAAAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9989-RA | 1333 | CG9989-RA | 135..1320 | 1..1186 | 5930 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 24494361..24495095 | 448..1182 | 3660 | 99.9 | Plus |
chr3R | 27901430 | chr3R | 24493912..24494310 | 49..447 | 1980 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 24493810..24493857 | 1..48 | 225 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 28671287..28672025 | 448..1186 | 3695 | 100 | Plus |
3R | 32079331 | 3R | 28670838..28671236 | 49..447 | 1995 | 100 | Plus |
3R | 32079331 | 3R | 28670736..28670783 | 1..48 | 240 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 28412118..28412856 | 448..1186 | 3695 | 100 | Plus |
3R | 31820162 | 3R | 28411669..28412067 | 49..447 | 1995 | 100 | Plus |
3R | 31820162 | 3R | 28411567..28411614 | 1..48 | 240 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 24493810..24493857 | 1..48 | 97 | -> | Plus |
chr3R | 24493912..24494310 | 49..447 | 99 | -> | Plus |
chr3R | 24494361..24495095 | 448..1182 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9989-RA | 1..1113 | 3..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9989-RA | 1..1113 | 3..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9989-RA | 1..1113 | 3..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9989-RA | 1..1113 | 3..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9989-RA | 1..1113 | 3..1115 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9989-RA | 1..1182 | 1..1182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9989-RA | 1..1182 | 1..1182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9989-RA | 33..1214 | 1..1182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9989-RA | 1..1182 | 1..1182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9989-RA | 33..1214 | 1..1182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28670736..28670783 | 1..48 | 100 | -> | Plus |
3R | 28670838..28671236 | 49..447 | 100 | -> | Plus |
3R | 28671287..28672021 | 448..1182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28670736..28670783 | 1..48 | 100 | -> | Plus |
3R | 28670838..28671236 | 49..447 | 100 | -> | Plus |
3R | 28671287..28672021 | 448..1182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28670736..28670783 | 1..48 | 100 | -> | Plus |
3R | 28670838..28671236 | 49..447 | 100 | -> | Plus |
3R | 28671287..28672021 | 448..1182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 24496458..24496505 | 1..48 | 100 | -> | Plus |
arm_3R | 24496560..24496958 | 49..447 | 100 | -> | Plus |
arm_3R | 24497009..24497743 | 448..1182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 28411669..28412067 | 49..447 | 100 | -> | Plus |
3R | 28412118..28412852 | 448..1182 | 100 | Plus | |
3R | 28411567..28411614 | 1..48 | 100 | -> | Plus |
Translation from 2 to 1114
> LP02841.pep MPDLKYMLTILSLYFFVGSVQANCLIDLAHLNANYVYLSQNNGVYDIQRS DIVEIHQTLYLLCNGGLHRTTFLCRYDSVFSPALSSAACAPPDPVVVKVP DTSCSIPSATFAVGFSFNGRFMELYRNCFDGYSLAFQHSIYKAYRYVNTV PRPNPTWQSDQLSGGFDNAYEGRATQACLLTNLGAVQPQCKFDRGHMTPA SAFISTELKKSTFRYLNAIPQYRGVNRGKWKAVETWVNNMVRGLYDNPII NNVQIPRTYDVLKVCIGALGVHRLRHNTNNNMIPIYLLDNNKIPVPEWMY KIVSHLSGDKWVMLTYNDVSLPNQQALNQICHVIPCHPGLNLNTKDVGHT VCCDPYRFITINAPHLTGVC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12781-PA | 348 | GF12781-PA | 15..346 | 16..358 | 334 | 29.9 | Plus |
Dana\GF19869-PA | 250 | GF19869-PA | 4..250 | 113..370 | 298 | 32.7 | Plus |
Dana\GF16434-PA | 351 | GF16434-PA | 2..349 | 4..358 | 268 | 25.3 | Plus |
Dana\GF16433-PA | 242 | GF16433-PA | 2..240 | 111..358 | 237 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11608-PA | 370 | GG11608-PA | 1..370 | 1..370 | 1630 | 82.4 | Plus |
Dere\GG11607-PA | 369 | GG11607-PA | 1..369 | 1..370 | 1420 | 72.2 | Plus |
Dere\GG11606-PA | 270 | GG11606-PA | 3..270 | 1..280 | 357 | 33.6 | Plus |
Dere\GG24146-PA | 351 | GG24146-PA | 6..349 | 4..358 | 327 | 27.4 | Plus |
Dere\GG12061-PA | 346 | GG12061-PA | 5..344 | 10..358 | 287 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17237-PA | 302 | GH17237-PA | 13..302 | 74..370 | 412 | 32.6 | Plus |
Dgri\GH16212-PA | 255 | GH16212-PA | 2..255 | 111..370 | 383 | 32 | Plus |
Dgri\GH16223-PA | 305 | GH16223-PA | 1..302 | 61..370 | 380 | 30.8 | Plus |
Dgri\GH18692-PA | 332 | GH18692-PA | 7..330 | 38..358 | 329 | 32.5 | Plus |
Dgri\GH23404-PA | 332 | GH23404-PA | 7..330 | 38..358 | 317 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sid-PA | 370 | CG9989-PA | 1..370 | 1..370 | 2015 | 100 | Plus |
CG33346-PB | 364 | CG33346-PB | 3..357 | 1..370 | 489 | 33.2 | Plus |
CG12917-PB | 356 | CG12917-PB | 7..354 | 3..358 | 335 | 27.7 | Plus |
CG14062-PB | 346 | CG14062-PB | 5..344 | 10..358 | 304 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19315-PA | 347 | GI19315-PA | 1..345 | 4..358 | 321 | 26.6 | Plus |
Dmoj\GI22179-PA | 301 | GI22179-PA | 13..301 | 74..370 | 316 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23183-PA | 258 | GL23183-PA | 2..258 | 111..370 | 434 | 36.2 | Plus |
Dper\GL11579-PA | 371 | GL11579-PA | 65..369 | 41..358 | 325 | 30.2 | Plus |
Dper\GL13696-PA | 356 | GL13696-PA | 5..350 | 2..354 | 310 | 26.4 | Plus |
Dper\GL13697-PA | 351 | GL13697-PA | 38..332 | 47..354 | 302 | 27.6 | Plus |
Dper\GL13695-PA | 329 | GL13695-PA | 44..327 | 47..358 | 200 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27180-PA | 258 | GA27180-PA | 2..258 | 111..370 | 436 | 36.2 | Plus |
Dpse\GA11906-PA | 320 | GA11906-PA | 15..318 | 42..358 | 322 | 30.3 | Plus |
Dpse\GA26995-PA | 356 | GA26995-PA | 5..350 | 2..354 | 303 | 26.2 | Plus |
Dpse\GA26996-PB | 369 | GA26996-PB | 7..350 | 4..354 | 301 | 25.2 | Plus |
Dpse\GA12733-PA | 346 | GA12733-PA | 44..344 | 47..358 | 287 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12732-PA | 370 | GM12732-PA | 1..370 | 1..370 | 1812 | 94.6 | Plus |
Dsec\GM12731-PA | 357 | GM12731-PA | 3..357 | 1..370 | 470 | 34.4 | Plus |
Dsec\GM21190-PA | 320 | GM21190-PA | 2..318 | 38..358 | 329 | 29 | Plus |
Dsec\GM12290-PA | 346 | GM12290-PA | 39..344 | 42..358 | 295 | 29.1 | Plus |
Dsec\GM12291-PA | 351 | GM12291-PA | 2..349 | 3..358 | 231 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21378-PA | 370 | GD21378-PA | 1..370 | 1..370 | 1766 | 92.7 | Plus |
Dsim\GD10718-PA | 325 | GD10718-PA | 2..323 | 38..358 | 344 | 30 | Plus |
Dsim\GD21377-PA | 275 | GD21377-PA | 3..264 | 1..274 | 329 | 31.7 | Plus |
Dsim\GD18024-PA | 346 | GD18024-PA | 39..344 | 42..358 | 292 | 28.8 | Plus |
Dsim\GD18025-PA | 351 | GD18025-PA | 2..349 | 3..358 | 230 | 23.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24298-PA | 514 | GJ24298-PA | 168..514 | 16..370 | 399 | 29.7 | Plus |
Dvir\GJ22194-PA | 320 | GJ22194-PA | 4..318 | 32..358 | 289 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10992-PA | 255 | GK10992-PA | 2..254 | 111..369 | 356 | 31.6 | Plus |
Dwil\GK18004-PA | 321 | GK18004-PA | 14..319 | 41..358 | 308 | 29.6 | Plus |
Dwil\GK10989-PA | 349 | GK10989-PA | 12..347 | 10..358 | 308 | 27.2 | Plus |
Dwil\GK10991-PA | 350 | GK10991-PA | 21..348 | 21..358 | 297 | 26.1 | Plus |
Dwil\GK17844-PA | 268 | GK17844-PA | 2..246 | 111..358 | 236 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23796-PA | 373 | GE23796-PA | 1..373 | 1..370 | 1554 | 77.5 | Plus |
Dyak\GE10504-PA | 251 | GE10504-PA | 2..250 | 111..369 | 437 | 38.5 | Plus |
Dyak\GE19342-PA | 320 | GE19342-PA | 15..318 | 42..358 | 330 | 29.8 | Plus |
Dyak\GE10502-PA | 346 | GE10502-PA | 5..344 | 10..358 | 298 | 28.3 | Plus |
Dyak\GE10503-PA | 351 | GE10503-PA | 7..349 | 10..358 | 242 | 24.6 | Plus |
Translation from 2 to 1114
> LP02841.hyp MPDLKYMLTILSLYFFVGSVQANCLIDLAHLNANYVYLSQNNGVYDIQRS DIVEIHQTLYLLCNGGLHRTTFLCRYDSVFSPALSSAACAPPDPVVVKVP DTSCSIPSATFAVGFSFNGRFMELYRNCFDGYSLAFQHSIYKAYRYVNTV PRPNPTWQSDQLSGGFDNAYEGRATQACLLTNLGAVQPQCKFDRGHMTPA SAFISTELKKSTFRYLNAIPQYRGVNRGKWKAVETWVNNMVRGLYDNPII NNVQIPRTYDVLKVCIGALGVHRLRHNTNNNMIPIYLLDNNKIPVPEWMY KIVSHLSGDKWVMLTYNDVSLPNQQALNQICHVIPCHPGLNLNTKDVGHT VCCDPYRFITINAPHLTGVC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9989-PA | 370 | CG9989-PA | 1..370 | 1..370 | 2015 | 100 | Plus |
CG33346-PB | 364 | CG33346-PB | 3..357 | 1..370 | 489 | 33.2 | Plus |
CG12917-PB | 356 | CG12917-PB | 7..354 | 3..358 | 335 | 27.7 | Plus |
CG14062-PB | 346 | CG14062-PB | 5..344 | 10..358 | 304 | 28 | Plus |