BDGP Sequence Production Resources |
Search the DGRC for LP02893
Library: | LP |
Tissue Source: | Drosophila melanogaster larval-early pupal |
Created by: | Ling Hong |
Date Registered: | 1998-06-11 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 28 |
Well: | 93 |
Vector: | pOT2 |
Associated Gene/Transcript | ru-RA |
Protein status: | LP02893.pep: gold |
Sequenced Size: | 1816 |
Gene | Date | Evidence |
---|---|---|
CG1214 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1214 | 2002-05-18 | Blastp of sequenced clone |
CG1214 | 2003-01-01 | Sim4 clustering to Release 3 |
ru | 2008-04-29 | Release 5.5 accounting |
ru | 2008-08-15 | Release 5.9 accounting |
ru | 2008-12-18 | 5.12 accounting |
1816 bp (1816 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118997
> LP02893.complete TAACGGCAACCGGCGGCAGCACGCGCAACTAACGGTTCACTGGAAAAGTA GAGAAAAACCACCGAGGAAAAACTTAGTGGAAAAGCACCGAACATTCGTA CCGTTCGTAGCATTTACTGCTCGGATCGACTGCCGCAGTAACTTGTCGCT CATCCTCGAAAGAAATAAAAAATAGAAGCTGCAACCAGTTCACATAATCC TGCCCCCCCCGGATGGCCTGCACAAGAGTCAACCATTTCATCACCCCCCT CGACAGCCGCCGCCGGGAGTAGACAGCATTCCGCTCATCTCACCATGACA GAAGCCGCCTCAGCCTCAGATGCTCCTGCTAAGTGGGGCACCGTCACAAG GCAGACGCCCCAAAAATAGACCCCTCATCGGAACGGTGGAGGAGGGGGAG ATGCCGCCCAGTACCGTTCTGCAAATGCCGCCGGCTCCGTTGTCATCGAA ATCCGGACTGGTGCTGGGCGTCTGCTGTGACCAGCTGATGGCGGTGCAGC CAGTGCAACGGGCATCCGGAGCAGCAGCAACCAAGAGCAATTCCCCGGAT TGGGGGAATCACAGGGCGAAACATCATGAAGGGTCTGCCGCGCCTTTCAA GTGGATTCCGCCCTTTTTCATTATCCTCGCCACGCTCCTTGAGGTTCTCG TGTTTCTATGGGTGGGTGCTGATCCACCAGAGGATTCTCTTCTGGTATAT CGACCCGACCAGCGCCTGCAGCTCTGGAGATTCCTTAGCTATGCCCTGCT CCACGCCAGTTGGCTCCATCTGGGTTACAATGTGCTCACTCAGCTCCTGT TCGGTGTGCCATTGGAGCTGGTACATGGATCGCTGAGAACGGGAGTCATT TATATGGCCGGAGTTTTGGCTGGCTCTTTGGGAACTTCGGTGGTGGACTC GGAAGTTTTTCTGGTGGGAGCCAGTGGAGGAGTTTACGCCTTGCTGGCCG CCCAACTGGCGAGTCTTTTGCTCAACTTTGGTCAAATGAGACACGGGGTA ATTCAGCTAATGGCTGTGATTTTGTTCGTTTTCTGCGATTTGGGGTATGC CCTCTATTCAAGAGAACTGGCAATGCATCAGCTGCAGACACGACCCTCTG TCTCCTATATCGCTCACATGACCGGTGCTCTGGCCGGGATTAGTGTGGGT CTGCTGCTTCTCCGGCAACTGGATGGTGGGCTGCGACCACGCCCACTCCG CTGGTTGGCCCTGGGCGTATGGTGCATATTCAGCGCCTTTGGAATCGCCT TCAACTTGGTGAATACGGTCACAGCTCAACTTCTGGCCGAGGAGGAGGGC CAGGTGATCAGGCAGCATCTGATGAATGACCTCGGAATGGGATGATTCCC CAGACGGAAGCCATAGACTGCATCCCGTTCACATACACTCACTCCTCTTA AATGTCTCCTCTTATGCCCTAGTCTAGTCACTAGATTATAAGACTTTTCC CAGGACAGTGTGCTCAAATAACATATCTATCGTCTATCGGATATCCTGGC TCCCACTTCAAACGGGGATTCGCTCAAAATACTCTTAGCTCGTAAGTCCC AACATTTATCTTATGCCAATGCCAAAGGAGTGGAGAGGTTCCTGCCGGGA ACTGAGCCTGGCTCACATCAAAGACTAAGGATCGGGTTTGGATTGCTATC GATGCTGATCGATTGTCCATTGAGTTGCCTACTTAGGCTTAATGCCAAAC CAGAGCTTAAAGACATAATAACATACATATTATAACTCCAGATACAATTA TTTGAAACAAGAAATCTAACTCAATAAATTACCAAACTATAGAGAGTAAA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ru-RA | 1866 | ru-RA | 41..1840 | 1..1800 | 9000 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 1386196..1386968 | 1028..1797 | 3725 | 99.1 | Plus |
chr3L | 24539361 | chr3L | 1383966..1384359 | 252..645 | 1850 | 98 | Plus |
chr3L | 24539361 | chr3L | 1385738..1386124 | 642..1028 | 1770 | 97.2 | Plus |
chr3L | 24539361 | chr3L | 1370169..1370420 | 1..252 | 1170 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 1386668..1387440 | 1028..1800 | 3865 | 100 | Plus |
3L | 28110227 | 3L | 1384449..1384842 | 252..645 | 1970 | 100 | Plus |
3L | 28110227 | 3L | 1386210..1386596 | 642..1028 | 1935 | 100 | Plus |
3L | 28110227 | 3L | 1370629..1370880 | 1..252 | 1260 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 1386668..1387440 | 1028..1800 | 3865 | 100 | Plus |
3L | 28103327 | 3L | 1384449..1384842 | 252..645 | 1970 | 100 | Plus |
3L | 28103327 | 3L | 1386210..1386596 | 642..1028 | 1935 | 100 | Plus |
3L | 28103327 | 3L | 1370629..1370880 | 1..252 | 1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1370169..1370420 | 1..252 | 97 | -> | Plus |
chr3L | 1383967..1384357 | 253..643 | 97 | -> | Plus |
chr3L | 1385740..1386124 | 644..1028 | 97 | -> | Plus |
chr3L | 1386197..1386968 | 1029..1797 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ru-RA | 1..1026 | 320..1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ru-RA | 1..1026 | 320..1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ru-RA | 1..1026 | 320..1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ru-RA | 1..1026 | 320..1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ru-RA | 1..1026 | 320..1345 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ru-RA | 10..1804 | 1..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ru-RA | 10..1804 | 1..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ru-RA | 2..1798 | 1..1797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ru-RA | 10..1804 | 1..1795 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ru-RA | 2..1798 | 1..1797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1370629..1370880 | 1..252 | 100 | -> | Plus |
3L | 1384450..1384840 | 253..643 | 100 | -> | Plus |
3L | 1386212..1386596 | 644..1028 | 100 | -> | Plus |
3L | 1386669..1387437 | 1029..1797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1370629..1370880 | 1..252 | 100 | -> | Plus |
3L | 1384450..1384840 | 253..643 | 100 | -> | Plus |
3L | 1386212..1386596 | 644..1028 | 100 | -> | Plus |
3L | 1386669..1387437 | 1029..1797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1370629..1370880 | 1..252 | 100 | -> | Plus |
3L | 1384450..1384840 | 253..643 | 100 | -> | Plus |
3L | 1386212..1386596 | 644..1028 | 100 | -> | Plus |
3L | 1386669..1387437 | 1029..1797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1370629..1370880 | 1..252 | 100 | -> | Plus |
arm_3L | 1384450..1384840 | 253..643 | 100 | -> | Plus |
arm_3L | 1386212..1386596 | 644..1028 | 100 | -> | Plus |
arm_3L | 1386669..1387437 | 1029..1797 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1370629..1370880 | 1..252 | 100 | -> | Plus |
3L | 1384450..1384840 | 253..643 | 100 | -> | Plus |
3L | 1386212..1386596 | 644..1028 | 100 | -> | Plus |
3L | 1386669..1387437 | 1029..1797 | 100 | Plus |
Translation from 319 to 1344
> LP02893.pep MLLLSGAPSQGRRPKNRPLIGTVEEGEMPPSTVLQMPPAPLSSKSGLVLG VCCDQLMAVQPVQRASGAAATKSNSPDWGNHRAKHHEGSAAPFKWIPPFF IILATLLEVLVFLWVGADPPEDSLLVYRPDQRLQLWRFLSYALLHASWLH LGYNVLTQLLFGVPLELVHGSLRTGVIYMAGVLAGSLGTSVVDSEVFLVG ASGGVYALLAAQLASLLLNFGQMRHGVIQLMAVILFVFCDLGYALYSREL AMHQLQTRPSVSYIAHMTGALAGISVGLLLLRQLDGGLRPRPLRWLALGV WCIFSAFGIAFNLVNTVTAQLLAEEEGQVIRQHLMNDLGMG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24760-PA | 352 | GF24760-PA | 31..352 | 24..341 | 1253 | 78.9 | Plus |
Dana\rho-PA | 365 | GF24766-PA | 112..364 | 98..340 | 732 | 55.1 | Plus |
Dana\GF25034-PA | 485 | GF25034-PA | 221..461 | 97..315 | 616 | 50.6 | Plus |
Dana\GF21300-PA | 418 | GF21300-PA | 179..406 | 97..313 | 415 | 36.9 | Plus |
Dana\GF15679-PA | 260 | GF15679-PA | 44..253 | 61..284 | 286 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14787-PA | 349 | GG14787-PA | 1..349 | 1..341 | 1498 | 90.3 | Plus |
Dere\GG14792-PA | 353 | GG14792-PA | 100..352 | 98..340 | 743 | 55.5 | Plus |
Dere\GG14598-PA | 485 | GG14598-PA | 221..461 | 97..315 | 626 | 51.9 | Plus |
Dere\GG18433-PA | 417 | GG18433-PA | 178..405 | 97..313 | 418 | 36.9 | Plus |
Dere\GG10271-PA | 263 | GG10271-PA | 69..254 | 95..285 | 296 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16237-PA | 321 | GH16237-PA | 6..319 | 31..340 | 1043 | 67.8 | Plus |
Dgri\GH16240-PA | 436 | GH16240-PA | 171..435 | 98..340 | 719 | 53.4 | Plus |
Dgri\GH15206-PA | 476 | GH15206-PA | 220..455 | 97..318 | 606 | 50 | Plus |
Dgri\GH24104-PA | 420 | GH24104-PA | 181..408 | 97..313 | 403 | 35.2 | Plus |
Dgri\GH11182-PA | 229 | GH11182-PA | 44..229 | 94..284 | 292 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ru-PA | 341 | CG1214-PA | 1..341 | 1..341 | 1756 | 100 | Plus |
rho-PB | 355 | CG1004-PB | 28..354 | 24..340 | 740 | 46.7 | Plus |
rho-PA | 355 | CG1004-PA | 28..354 | 24..340 | 740 | 46.7 | Plus |
stet-PA | 330 | CG33166-PA | 66..306 | 97..315 | 626 | 51.9 | Plus |
stet-PB | 485 | CG33166-PB | 221..461 | 97..315 | 626 | 51.9 | Plus |
rho-4-PB | 417 | CG1697-PB | 178..405 | 97..313 | 427 | 36.9 | Plus |
rho-4-PA | 417 | CG1697-PA | 178..405 | 97..313 | 427 | 36.9 | Plus |
rho-6-PB | 263 | CG17212-PB | 69..253 | 95..284 | 317 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16665-PA | 311 | GI16665-PA | 3..309 | 28..340 | 952 | 66.2 | Plus |
Dmoj\GI16668-PA | 398 | GI16668-PA | 142..398 | 98..341 | 732 | 55.4 | Plus |
Dmoj\GI16724-PA | 476 | GI16724-PA | 220..455 | 97..318 | 614 | 51.3 | Plus |
Dmoj\GI14374-PA | 420 | GI14374-PA | 181..408 | 97..313 | 421 | 36.9 | Plus |
Dmoj\GI15831-PA | 242 | GI15831-PA | 54..237 | 98..286 | 262 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22503-PA | 344 | GL22503-PA | 4..344 | 28..341 | 1114 | 67.2 | Plus |
Dper\GL22587-PA | 487 | GL22587-PA | 222..485 | 97..338 | 621 | 47.5 | Plus |
Dper\GL22508-PA | 342 | GL22508-PA | 136..341 | 120..340 | 499 | 50.5 | Plus |
Dper\GL26733-PA | 417 | GL26733-PA | 178..405 | 97..313 | 410 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11431-PA | 336 | GA11431-PA | 4..336 | 28..341 | 1130 | 69.6 | Plus |
Dpse\rho-PA | 365 | GA10027-PA | 136..364 | 120..340 | 716 | 59.6 | Plus |
Dpse\GA17336-PA | 487 | GA17336-PA | 222..485 | 97..338 | 612 | 46.8 | Plus |
Dpse\GA14244-PA | 417 | GA14244-PA | 178..405 | 97..313 | 410 | 35.6 | Plus |
Dpse\GA14394-PA | 252 | GA14394-PA | 62..250 | 95..288 | 239 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14406-PA | 344 | GM14406-PA | 1..344 | 1..341 | 1694 | 95.6 | Plus |
Dsec\ve-PA | 364 | GM14413-PA | 48..363 | 27..340 | 750 | 46.8 | Plus |
Dsec\GM14213-PA | 485 | GM14213-PA | 221..461 | 97..315 | 631 | 52.3 | Plus |
Dsec\GM13096-PA | 417 | GM13096-PA | 178..405 | 97..313 | 421 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13615-PA | 344 | GD13615-PA | 1..344 | 1..341 | 1702 | 96.2 | Plus |
Dsim\GD13619-PA | 355 | GD13619-PA | 64..354 | 52..340 | 748 | 50.3 | Plus |
Dsim\GD13475-PA | 485 | GD13475-PA | 221..461 | 97..315 | 633 | 52.3 | Plus |
Dsim\GD17034-PA | 382 | GD17034-PA | 143..370 | 97..313 | 418 | 36.9 | Plus |
Dsim\GD22127-PA | 267 | GD22127-PA | 73..257 | 95..284 | 308 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12917-PA | 314 | GJ12917-PA | 1..312 | 28..340 | 989 | 66.1 | Plus |
Dvir\rho-PA | 401 | GJ12920-PA | 145..401 | 98..341 | 736 | 55.8 | Plus |
Dvir\GJ12468-PA | 476 | GJ12468-PA | 220..455 | 97..318 | 607 | 51.3 | Plus |
Dvir\GJ10319-PA | 246 | GJ10319-PA | 49..232 | 95..283 | 275 | 33.9 | Plus |
Dvir\GJ19413-PA | 350 | GJ19413-PA | 181..299 | 97..200 | 150 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16979-PA | 315 | GK16979-PA | 7..314 | 42..340 | 903 | 63.7 | Plus |
Dwil\GK16984-PA | 391 | GK16984-PA | 68..390 | 51..340 | 745 | 47.9 | Plus |
Dwil\GK17206-PA | 475 | GK17206-PA | 219..473 | 97..338 | 593 | 46.9 | Plus |
Dwil\GK15930-PA | 418 | GK15930-PA | 179..406 | 97..313 | 417 | 36.5 | Plus |
Dwil\GK14633-PA | 257 | GK14633-PA | 68..232 | 95..266 | 249 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21150-PA | 343 | GE21150-PA | 1..343 | 1..341 | 1538 | 92.7 | Plus |
Dyak\GE21154-PA | 355 | GE21154-PA | 102..354 | 98..340 | 735 | 55.1 | Plus |
Dyak\GE20958-PA | 485 | GE20958-PA | 221..461 | 97..315 | 632 | 52.3 | Plus |
Dyak\GE15951-PA | 417 | GE15951-PA | 178..405 | 97..313 | 418 | 36.9 | Plus |
Dyak\GE12391-PA | 263 | GE12391-PA | 69..254 | 95..285 | 286 | 32.5 | Plus |
Translation from 319 to 1344
> LP02893.hyp MLLLSGAPSQGRRPKNRPLIGTVEEGEMPPSTVLQMPPAPLSSKSGLVLG VCCDQLMAVQPVQRASGAAATKSNSPDWGNHRAKHHEGSAAPFKWIPPFF IILATLLEVLVFLWVGADPPEDSLLVYRPDQRLQLWRFLSYALLHASWLH LGYNVLTQLLFGVPLELVHGSLRTGVIYMAGVLAGSLGTSVVDSEVFLVG ASGGVYALLAAQLASLLLNFGQMRHGVIQLMAVILFVFCDLGYALYSREL AMHQLQTRPSVSYIAHMTGALAGISVGLLLLRQLDGGLRPRPLRWLALGV WCIFSAFGIAFNLVNTVTAQLLAEEEGQVIRQHLMNDLGMG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ru-PA | 341 | CG1214-PA | 1..341 | 1..341 | 1756 | 100 | Plus |
rho-PB | 355 | CG1004-PB | 28..354 | 24..340 | 740 | 46.7 | Plus |
rho-PA | 355 | CG1004-PA | 28..354 | 24..340 | 740 | 46.7 | Plus |
stet-PA | 330 | CG33166-PA | 66..306 | 97..315 | 626 | 51.9 | Plus |
stet-PB | 485 | CG33166-PB | 221..461 | 97..315 | 626 | 51.9 | Plus |